Gcaud2567.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2567.t1 vs. uniprot
Match: A0A2V3IXW1_9FLOR (RNA exonuclease 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXW1_9FLOR) HSP 1 Score: 382 bits (981), Expect = 2.620e-130 Identity = 199/299 (66.56%), Postives = 231/299 (77.26%), Query Frame = 0
Query: 3 DFVQEAVYASLRNDKKLEKTLEDRNGSAVNASGAGIRSKTVKQAAKKRK-RISSNWEQLQKTLPKTALRNTKRKRASKELESKNVESLLDASQVSSFMNRPVVETNEVTDVVAMDCEMVGVGPDGKQNALARVSVVNYSGDVLYDTYVKVKERVTDYRTKWSGVKPEDVALDSSKAVDPYEAQKEVGDLIRGRIVVGHALKNDLKVLRISHPWQDVRDTSFFFKKLWKTQGRRTGVGPKLSVIVAEVLGVDTFQKSEHDSCEDARAALALYKRHRKAWETSLRKGRARTASAAKESVNK 300
DFV+EAV ASLRNDKKL+ + + AS RISSNW+QLQK+LPKT LR +KR+R + E++ E SQVSSFM RPVV TNE+TD+V MDCEMVGVGPDGKQNALARVSVVNYSGDVLYD +VKVKERVTDYRT+WSGVK EDV+ DS AV+ YEAQK VG+LI GRIVVGHAL+ND+KVLRISHPWQD+RDT+ +FK++W+ QGRR+ VGPKLSV+VAEVLGVDTFQKSEHDSCEDARAALALYKRHRK WE SL++G+ + NK
Sbjct: 15 DFVREAVLASLRNDKKLDAEISSNDAEEKAASXXXXXXXXXXXXXXXXXXRISSNWKQLQKSLPKTVLRGSKRQRKVERSETQEDEVNEAVSQVSSFMKRPVVNTNEITDIVGMDCEMVGVGPDGKQNALARVSVVNYSGDVLYDKFVKVKERVTDYRTQWSGVKAEDVSPDSCTAVEAYEAQKAVGELIAGRIVVGHALRNDIKVLRISHPWQDIRDTAVYFKRVWRKQGRRSAVGPKLSVVVAEVLGVDTFQKSEHDSCEDARAALALYKRHRKEWEASLKQGKGTVQRHGQSKRNK 313
BLAST of Gcaud2567.t1 vs. uniprot
Match: A0A2R6XP24_MARPO (RNA exonuclease 4 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XP24_MARPO) HSP 1 Score: 173 bits (439), Expect = 3.750e-49 Identity = 106/236 (44.92%), Postives = 153/236 (64.83%), Query Frame = 0
Query: 53 ISSNWEQLQKTLPKTALRNTKRKRASKELESKNVESLLDASQVSSFMN-RPVVETNEVTDVVAMDCEMVGVGPDGKQNALARVSVVNYSGDVLYDTYVKVKERVTDYRTKWSGVKPEDVALDSSKAVDPYEAQKEVGDLIRGRIVVGHALKNDLKVLRISHPWQDVRDTSFFFKKLWKTQGRRTGVGPKLSVIVAEVLGVDTFQKSEHDSCEDARAALALYKRHRKAWETSLRKGR 287
+SSNW +LQ L K ++ K+ + SKE + + + + ++ +P VT V+AMDCEMVGVG +GK++ALARV++VN G+V+YD +V+ +E VTD+RT+ SGV+P D+ KA D + QK+V +LI+G+++VGHAL NDLK+L +SHP +D+RDT + K L GR L + AE LG + Q+ EHDS EDARAAL LYK+ R+ WE L++ R
Sbjct: 26 LSSNWLELQAALGKQ-VKYKKKTKPSKETPTAVASAGVSKGEKDEAVSLQPTSSDFSVTKVLAMDCEMVGVGVEGKRSALARVTLVNIYGNVVYDKHVRPQEFVTDFRTQVSGVRPRDLR----KAEDFWTVQKDVAELIKGKVLVGHALHNDLKILLLSHPRKDIRDTQRY-KSLRSDNGRVQA----LKHLAAEHLGA-SIQEREHDSIEDARAALFLYKKFREDWEKGLKQRR 250
BLAST of Gcaud2567.t1 vs. uniprot
Match: A0A6P4B3V8_ARADU (RNA exonuclease 4 n=3 Tax=Arachis TaxID=3817 RepID=A0A6P4B3V8_ARADU) HSP 1 Score: 172 bits (437), Expect = 8.360e-49 Identity = 111/243 (45.68%), Postives = 151/243 (62.14%), Query Frame = 0
Query: 53 ISSNWEQLQKTLPKTALRNTKRKRASKE-----------LESKNVESLLDASQVSSFMNRPVVETNEVTDVVAMDCEMVGVGPDGKQNALARVSVVNYSGDVLYDTYVKVKERVTDYRTKWSGVKPEDVALDSSKAVDPYEAQKEVGDLIRGRIVVGHALKNDLKVLRISHPWQDVRDTSFFFKKLWKTQGRRTGVGPKLSVIVAEVLGVDTFQKSEHDSCEDARAALALYKRHRKAWETSLR 284
++ NW QLQ+ L N K R KE ES N ES D SQ+ + PV + + +TD VA+DCEMVGVG G ++AL RV++VN G+VLYD +V+ ERV D+RTK SG++P D+ KA+D + AQK V +L++GRI+VGHAL+NDLK L +SHP +D+RDTS + L ++G L + AE+LG + Q EH +DARAA+ LY+R+RK WE SLR
Sbjct: 17 LNPNWVQLQQKLKL----NNKSSRTYKEEDTPKSILGKRKESPNDES--DDSQIDPLI--PVNDDSSLTDAVAIDCEMVGVG-QGNKSALGRVTMVNKWGNVLYDEFVRPVERVVDFRTKISGIRPRDL----KKAIDFWTAQKRVAELMKGRILVGHALQNDLKALLLSHPKKDIRDTSEYQPFL------KSGCRRALRHLAAEILGAE-IQSGEHCPIQDARAAMLLYQRNRKEWERSLR 239
BLAST of Gcaud2567.t1 vs. uniprot
Match: A0A443SME7_9ACAR (RNA exonuclease 4 n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SME7_9ACAR) HSP 1 Score: 172 bits (436), Expect = 1.560e-48 Identity = 105/245 (42.86%), Postives = 150/245 (61.22%), Query Frame = 0
Query: 53 ISSNWEQLQKTLPKTALRNTKRKRASKELESKNVESLLDASQV-SSFMNRPVVETNE------------VTDVVAMDCEMVGVGPDGKQNALARVSVVNYSGDVLYDTYVKVKERVTDYRTKWSGVKPEDVALDSSKAVDPYEAQKEVGDLIRGRIVVGHALKNDLKVLRISHPWQDVRDTSFFFKKLWKTQGRRTGVGPKLSVIVAEVLGVDTFQKSEHDSCEDARAALALYKRHRKAWETSLR 284
+SSNW+ L L R K K++++ ES+ + +D + F + +VETN+ +T V+MDCEMVGVG DG+Q+ LAR S+VN+ G +YD YVK E+VT+YRT SG++P + D QKEV ++I+GRI+VGHA+K+DL+VL + HP +D+RDTS +FK + G +T P L + ++LGV Q EHDS EDAR A+ LY HRKAWE+S++
Sbjct: 35 VSSNWKNLCSAL-NIKSRPKKAKQSNETNESEKIWFEIDGKTLREDFGKKKIVETNKEEHLVKEKSFTGLTRAVSMDCEMVGVGKDGEQSILARASIVNHFGHCIYDKYVKPTEKVTNYRTSVSGIRPHHL----KDGEDFKTVQKEVFEIIKGRILVGHAIKHDLQVLFLDHPRKDIRDTSRYFKHI---SGGKT---PSLRRLSEQLLGVG-IQSGEHDSVEDARVAMRLYTMHRKAWESSVK 267
BLAST of Gcaud2567.t1 vs. uniprot
Match: UPI00077BA19D (RNA exonuclease 4 n=1 Tax=Tetranychus urticae TaxID=32264 RepID=UPI00077BA19D) HSP 1 Score: 170 bits (430), Expect = 2.120e-48 Identity = 91/176 (51.70%), Postives = 118/176 (67.05%), Query Frame = 0
Query: 109 VTDVVAMDCEMVGVGPDGKQNALARVSVVNYSGDVLYDTYVKVKERVTDYRTKWSGVKPEDVALDSSKAVDPYEAQKEVGDLIRGRIVVGHALKNDLKVLRISHPWQDVRDTSFFFKKLWKTQGRRTGVGPKLSVIVAEVLGVDTFQKSEHDSCEDARAALALYKRHRKAWETSLR 284
+T V MDCEMVGVG G Q+ LARVS+VN G LYD YVK E VTDYRT SG++PED+ D + Q +V D+I+GRI+VGHALKNDLKVL + HP +RDTS +FKK+ K G+ P L + +++LGVD Q EHDS +DARAA+ LY ++K WE+ ++
Sbjct: 42 LTRTVGMDCEMVGVGDKGTQSILARVSLVNQFGHCLYDKYVKPTEPVTDYRTSVSGIRPEDI----ENGEDFKKVQYDVNDIIKGRILVGHALKNDLKVLFLDHPRSRIRDTSVYFKKMLKGGGK-----PSLKRLTSQLLGVD-IQHGEHDSVQDARAAMRLYTMYKKKWESEIK 207
BLAST of Gcaud2567.t1 vs. uniprot
Match: A0A423SPU9_PENVA (RNA exonuclease 4 n=2 Tax=Penaeus vannamei TaxID=6689 RepID=A0A423SPU9_PENVA) HSP 1 Score: 173 bits (438), Expect = 5.050e-48 Identity = 98/198 (49.49%), Postives = 133/198 (67.17%), Query Frame = 0
Query: 102 PVVETNE-VTDVVAMDCEMVGVGPDGKQNALARVSVVNYSGDVLYDTYVKVKERVTDYRTKWSGVKPEDVALDSSKAVDPYEAQKEVGDLIRGRIVVGHALKNDLKVLRISHPWQDVRDTSFF--FKKLWKTQGRRTGVGPKLSVIVAEVLGVDTFQKSEHDSCEDARAALALYKRHRKAWETSLRKGRARTASAAKE 296
PV +TNE +T V+AMDCEMVGVG DGK++ LARVS+VN+SG VLYD YVK E+VTDYRT+ SG++ D K D QKEV DL++G+++VGHALKNDLKVL +SHP +RDTS + F++L+K G P L + +++GV Q EH S +DA+AA+ LY R+ WE S ++ + +A K+
Sbjct: 153 PVKKTNEELTQVIAMDCEMVGVGMDGKESILARVSIVNHSGKVLYDKYVKPLEKVTDYRTQISGIRH----CDLEKGEDFKTVQKEVADLLKGKVLVGHALKNDLKVLFLSHPRTRIRDTSKYKGFRRLFK------GSTPSLKNLTEKLIGVK-IQHGEHSSVQDAQAAMRLYTAFRREWENSKKQFNKKKTAAVKD 339
BLAST of Gcaud2567.t1 vs. uniprot
Match: A9P108_PICSI (RNA exonuclease 4 n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9P108_PICSI) HSP 1 Score: 170 bits (430), Expect = 8.280e-48 Identity = 109/247 (44.13%), Postives = 149/247 (60.32%), Query Frame = 0
Query: 53 ISSNWEQLQKTLPKTALRNTKRKRASKELE--------SKNVESLLDASQVSSFMNRPVVETNEVTDVVAMDCEMVGVGPDGKQNALARVSVVNYSGDVLYDTYVKVKERVTDYRTKWSGVKPEDVALDSSKAVDPYEAQKEVGDLIRGRIVVGHALKNDLKVLRISHPWQDVRDTSFFFKKLWKTQGRRTGVGPKLSVIVAEVLGVDTFQKSEHDSCEDARAALALYKRHRKAWETSLRKGRARTA 291
++ NW QL+ L R T K +K + S N E D + + +PV + +T VAMDCEMVGVG DG +NALARV++VN G+ +YD YV+ E V+D+R+ SGV+ A KA D + QK+V +LI+GRI+VGHAL+NDLKVL +SHP +D+RDTS + K L GR L + AE+LGV Q+ EH S EDARAAL LY++ +K WE S+R+ R + +
Sbjct: 25 LNPNWTQLKAKLNSHTRRRTHFKPEAKITQVRVSGGEYSDNPEVTEDGTSSTLASFKPVNDDCSLTGAVAMDCEMVGVGSDGSRNALARVTLVNAWGNAIYDEYVRPLEAVSDFRSNISGVR----AHHLKKAKDLWSVQKDVSELIKGRILVGHALQNDLKVLFLSHPKKDIRDTSAY-KPLRSKAGRPRA----LRDLSAEILGVK-IQEKEHCSVEDARAALFLYRKFKKEWEKSIREKRKKVS 261
BLAST of Gcaud2567.t1 vs. uniprot
Match: D8M1R3_BLAHO (RNA exonuclease 4 n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M1R3_BLAHO) HSP 1 Score: 169 bits (429), Expect = 8.560e-48 Identity = 103/248 (41.53%), Postives = 151/248 (60.89%), Query Frame = 0
Query: 43 VKQAAKKRKRISSNWEQLQKTLPKTALRN---TKRKRASKELESKNVESLLDASQVSSFMNRPVVETNEVTDVVAMDCEMVGVGPDGKQNALARVSVVNYSGDVLYDTYVKVKERVTDYRTKWSGVKPEDVALDSSKAVDPYEAQKEVGDLIRGRIVVGHALKNDLKVLRISHPWQDVRDTSFF--FKKLWKTQGRRTGVGPKLSVIVAEVLGVDTFQKSEHDSCEDARAALALYKRHRKAWETSLRK 285
K+A K+ +I SNWE ++K + LRN KR+R +E K+V S + + +N T T VVA+DCEMVGVGP+ ++ALAR+S+VNY G +LYD++VK VTDYRT+WSG++PED L+ + V EAQ L++ RIVVGH++ ND + L + HP + +RDT+++ F + WK + + KL ++ G Q+ EHDS +DARA L LYK++R WE ++K
Sbjct: 12 TKEAHPKKAKIGSNWESMKKLI----LRNPAEAKRRRLREENPEKSV-SPKTLVNLEALLNPDGSGTASDTPVVAIDCEMVGVGPNN-ESALARISIVNYYGAILYDSFVKPPSAVTDYRTQWSGIRPED--LEGDRVVTLREAQDVADRLMKNRIVVGHSISNDFEALMMHHPRRLIRDTAYYRPFMRKWKNKW----LPHKLQYLLKREFGT-AIQEGEHDSIDDARATLLLYKKYRVEWENEIKK 246
BLAST of Gcaud2567.t1 vs. uniprot
Match: B9GGE5_POPTR (RNA exonuclease 4 n=6 Tax=Saliceae TaxID=238069 RepID=B9GGE5_POPTR) HSP 1 Score: 170 bits (430), Expect = 9.790e-48 Identity = 118/259 (45.56%), Postives = 157/259 (60.62%), Query Frame = 0
Query: 37 GIRSKTVKQAAKKRKR-ISSNWEQLQKTL-------PKTALRNTKRKRASKELESKNVESLLDASQVSSFMNRPVVETNE---VTDVVAMDCEMVGVGPDGKQNALARVSVVNYSGDVLYDTYVKVKERVTDYRTKWSGVKPEDVALDSSKAVDPYEAQKEVGDLIRGRIVVGHALKNDLKVLRISHPWQDVRDTSFFFKKLWKTQGRRTGVGPKLSVIVAEVLGVDTFQKSEHDSCEDARAALALYKRHRKAWETSLR 284
G + K KK+K I+ NW QLQ+TL PKT+ T+ K E + ES D SQ++ P++ TN+ VTD +AMDCEMVGVG G ++AL RV++VN G+VLYD +V+ ERV D+RT+ SG++P D+ KA D AQK+V LI+GRI+VGHAL NDLK L + HP +D+RDTS + L +GRR L + AE LG Q EH EDARAA+ LY+R++K WE S+R
Sbjct: 2 GSEEQKKKNPKKKQKLPINPNWAQLQQTLQIHGSRRPKTSNTETQDSILGKRKERPDAES--DKSQIN-----PLIPTNDDFSVTDAIAMDCEMVGVG-QGNRSALGRVTLVNQWGNVLYDEFVRPVERVADFRTQISGIRPRDLR----KARDFSTAQKKVAVLIKGRILVGHALSNDLKALLLGHPKKDLRDTSEYQPFL---KGRRRKA---LRHLAAEFLGAK-IQSGEHCPIEDARAAMLLYQRNKKEWEKSIR 241
BLAST of Gcaud2567.t1 vs. uniprot
Match: A0A1J7GWB5_LUPAN (RNA exonuclease 4 n=2 Tax=Lupinus TaxID=3869 RepID=A0A1J7GWB5_LUPAN) HSP 1 Score: 168 bits (426), Expect = 4.090e-47 Identity = 110/242 (45.45%), Postives = 149/242 (61.57%), Query Frame = 0
Query: 53 ISSNWEQLQKTL----PKTALRNTKRKR---ASKELESKNVESLLDASQVSSFMNRPVVETNE---VTDVVAMDCEMVGVGPDGKQNALARVSVVNYSGDVLYDTYVKVKERVTDYRTKWSGVKPEDVALDSSKAVDPYEAQKEVGDLIRGRIVVGHALKNDLKVLRISHPWQDVRDTSFFFKKLWKTQGRRTGVGPKLSVIVAEVLGVDTFQKSEHDSCEDARAALALYKRHRKAWETSLR 284
++ NW QLQ+ L PK RN K+ SK + K + D S S P+ TN+ +TD VAMDCEMVGVG +G ++AL RV+++N G+V+YD +V+ ERV D+RT SG++P D+ KA D + AQK+V +LI+GRI+VGHAL NDLK L +SHP +D+RDTS + + KT RR L + EVLG Q EH EDARAA+ LY+R+RK WE S++
Sbjct: 15 MNPNWVQLQQKLKLNAPKPYSRNFKKSEEDDTSKSILGKRKDRSDDESDDSEI--NPLAPTNDDSSLTDAVAMDCEMVGVG-EGNKSALGRVTLINKWGNVIYDEFVRPLERVVDFRTFVSGIRPRDLR----KAKDLWSAQKKVAELIKGRILVGHALHNDLKALLLSHPKKDIRDTSEY-QPFQKTGSRRA-----LKHLAEEVLGAK-IQSGEHCPIEDARAAMMLYQRNRKEWEKSVK 242 The following BLAST results are available for this feature:
BLAST of Gcaud2567.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2567.t1 ID=Gcaud2567.t1|Name=Gcaud2567.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=304bpback to top |