Gcaud2561.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2561.t1
Unique NameGcaud2561.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length81
Homology
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BLAST of Gcaud2561.t1 vs. uniprot
Match: A0A2V3IXX2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXX2_9FLOR)

HSP 1 Score: 115 bits (287), Expect = 5.750e-32
Identity = 55/75 (73.33%), Postives = 65/75 (86.67%), Query Frame = 0 
Query:    1 MALPSKIGAFMVGLAIGSANCFYWLHKDVRNVNDAMMRKIDSIRHQIEEKDRKAALQLAALESAVTGLSTPIGDD 75
            MALPSK+GAFMVGLA+GSANCFYWL+ DV NVN+AM RKIDSI+HQIEEK+RKA LQLAALE+A+  L+    D+
Sbjct:    1 MALPSKLGAFMVGLAVGSANCFYWLYHDVNNVNNAMTRKIDSIQHQIEEKERKAKLQLAALEAAIPSLAQLKSDE 75
The following BLAST results are available for this feature:
BLAST of Gcaud2561.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IXX2_9FLOR5.750e-3273.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..80
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_296_length_31928_cov_4.500110contigNODE_296_length_31928_cov_4.500110:10838..11232 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2561.t1Gcaud2561.t1Gracilaria caudata M_176_S67 malemRNANODE_296_length_31928_cov_4.500110 10838..11232 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2561.t1 ID=Gcaud2561.t1|Name=Gcaud2561.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=81bp
MALPSKIGAFMVGLAIGSANCFYWLHKDVRNVNDAMMRKIDSIRHQIEEK
DRKAALQLAALESAVTGLSTPIGDDGTLPS*
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