Gcaud2560.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2560.t1
Unique NameGcaud2560.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length568
Homology
BLAST of Gcaud2560.t1 vs. uniprot
Match: A0A2V3IXX1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXX1_9FLOR)

HSP 1 Score: 609 bits (1571), Expect = 2.010e-212
Identity = 312/531 (58.76%), Postives = 397/531 (74.76%), Query Frame = 0
Query:   29 LVLFGLLFALSSVVSVAAKAYKLTNSTVENRGVVRVANSNGKDADWSRLYPSKIRKVPDAWNRYTYPWYVPHRVRFLTLEESRYRVLYSPVRPAASDGLGHNSAVMNAEIGVALRLGLSYSHRVSSHGSLTRDNHNAVEEFFGWGHGQIPREFIRESFCKSSLNISHKTCHVCEGLKMNKTFPEMNFKHLIELPYNLTYGRMRCLRSGNLVLKNA-CKEQQQSFLKRNNMSHTIFQMPLLTCATNPADSHFDPTTRAYLFHSYWDQHGLMNPQRRTNNTARSSI-VQRYNIPILHLSGTSKPIEFPEHALNIAIHARRGDFFKETTRNMVSTATFGRVVREFMAIVQERGGIFARMPVIVHLYSEGAPKEKNRFQGHDISRMTQLYMDSDGSIRDAGWVTQTIRAFGSAEVARHRSTDSSLKASSSKPRRLLLFPGGLRVKLHIAADTLQSMREMISADVFIGSESGMSMHIVSTMSRGLYFLPTRLVSHEFECCQVTFDPRSGVLANPESVKAFWDAFAGANEASATRAF 557
            LV FG+L  L+S++S+ A+A  L+    +N+ V  +  S+G+      ++ SKIR+VP   NR+  PWYV  RVRF TLEESRYRVLYSP+R  ASDGLGHNS VMNAEIG+ALRLGL+Y+HRVS +GSLTRDN NAVE FFGWGHGQIPREFIRESFCKSS N S   C  CEGLK N +F EM F HL+E+PYNLTYGRM C RSG+ + +++ C +Q   F++R+N  +TIFQMPL TCA+NP DS FDP TRAYLF+ YWD+HG  +     ++  +SS+   +  IP+L  +   +PI +PEHALNIAIHARRGDFF ET R+MVSTA FGR VR+FM IVQ++GG+F+RMPVIVHLYSEG   + +++ GHD+S M + Y DSDG+ RDAGWVT+ IR  G +E     S +S+  +  + PR L LFPGGL+V+LHIA +TLQS+ EMI+AD+FIGS SGMSMH+V+TMSRG++ +P+ L ++  ECC   FDP++G L +P+SV  FW AF  ANEASATRA+
Sbjct:    3 LVHFGILSVLTSMISLVAQAVVLS----QNKTVPVI--SDGQTV----IHASKIRQVPATSNRFDNPWYVHKRVRFPTLEESRYRVLYSPLRGVASDGLGHNSGVMNAEIGIALRLGLTYTHRVSLYGSLTRDNPNAVENFFGWGHGQIPREFIRESFCKSSGNFSRAKCQPCEGLKSNSSFHEMKFHHLVEIPYNLTYGRMWCSRSGSPLHESSNCMKQANDFVERHNQPYTIFQMPLDTCASNPVDSFFDPVTRAYLFNQYWDRHGSRSRYSTEDDEKKSSVRFTKEGIPLLRATVRRRPISYPEHALNIAIHARRGDFFMETRRSMVSTAAFGRTVRDFMTIVQKQGGVFSRMPVIVHLYSEGINVKGSKYGGHDVSGMAKSYKDSDGTDRDAGWVTKVIRGIGLSEPEVQSSVNSTSASRKNAPR-LSLFPGGLKVQLHIATNTLQSLHEMIAADMFIGSASGMSMHVVATMSRGVHLVPSFLTTYSGECCHSAFDPQNGGLHDPQSVAKFWKAFTFANEASATRAY 522          
BLAST of Gcaud2560.t1 vs. uniprot
Match: A0A2V3IXN9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXN9_9FLOR)

HSP 1 Score: 498 bits (1283), Expect = 2.990e-168
Identity = 277/542 (51.11%), Postives = 345/542 (63.65%), Query Frame = 0
Query:   34 LLFALSSVVSVAA--------KAYKLTNSTVENRGVVRVANSNGKDADWSRLYPSKIRKVPDAWNRYTYPWYVPHRVRFLTLEESRYRVLYSPVRPAASDGLGHNSAVMNAEIGVALRLGLSYSHRVSSHGSLTRDNHNAVEEFFGWGHGQIPREFIRESFCKSSLNISHKTCHVCEGLKMNKTFPEMNFKHLIELPYNLTYGRMRCLRSGNLVLKNACKEQQQSFLKRNNMSHTIFQMPLLTCATNPADSHFDPTTRAYLFHSYWDQHGLM-NPQRRTNNTARSS-IVQRYNIPILHLSGTSKPIEFPEHALNIAIHARRGDFFKETTRNMVSTATFGRVVREFMAIVQERGGIFARMPVIVHLYSEGAPKEKNRFQGHDISRMTQLYMDSDGSIRDAGWVTQTIRAFGSAEVARHRSTDSSLKASSSKPRRLLLFPGGLRVKLHIAADTLQSMREMISADVFIGSESGMSMHIVSTMSRGLYFLPTRLVSHEFECCQVTFDPRSGVLANP-ESVKAFWDAFAGANEASATRAFLANKVHN 564
            L F LS+VVSV A        K+  L  ++ ++    +  +  GK  D      SKI+KVP   NR+  PWYVP R RFL+L ESR+RVLYSP+R  + +GLGH+ +VMNAEIG ALRLGL+Y+HR+SS+GSLT    +AVE FFGWGH QIPR FIRESFCKSS +     C VCE L  N +   M+F+ L+ LP NLTY R+ C    +   + AC   Q +FLK +N SHTIFQMP+ +C +NP D H D  TR+YLFH YW +HG   N         R+   V R  IP L  +G  + I   E  LNIAIHARRGDFFK   R MVST  FG VVR  M +VQ RGG FA M V+VH+YSEGA  E +    HD+S+M + Y DSDG+IRD  WVT+ IR  G +E  R  S  S   AS +  R + LFPGGL+VK HIAADTL S+ EMI+ADVFIGS SGM +H+V+T+SRG++ +P R+ +   ECC V FD  SG + +  E V+ FWD FA ANEA A RA   +K  N
Sbjct:   34 LFFILSAVVSVHAQEEASNPLKSGYLIGASDQSSQWKQPQSLGGKFLD-----ESKIKKVPALRNRFDTPWYVPKRARFLSLAESRHRVLYSPLRSRSGNGLGHSFSVMNAEIGAALRLGLTYTHRISSYGSLTMGEPSAVEHFFGWGHEQIPRSFIRESFCKSSFDGFPHNCEVCEALMSNDSISFMHFQELVNLPRNLTYSRIACSTIRDAHKREACFLSQAAFLKAHNKSHTIFQMPVDSCGSNPTDGHVDQATRSYLFHQYWSRHGKRKNDDYHLEFRERNQRTVYRGGIPRLQFTGRKRAIGHAEDVLNIAIHARRGDFFK-VNRKMVSTRAFGVVVRSMMEVVQRRGGAFAEMAVVVHIYSEGALMEGSEKALHDVSKMDKRYRDSDGTIRDEAWVTRVIRGSGKSEPRRASSNKS---ASGNDTRAVALFPGGLQVKFHIAADTLTSLHEMIAADVFIGSLSGMGLHVVTTLSRGIHVMPRRVSTFNMECCSVGFDSESGRIDDSMEHVEMFWDGFARANEACAWRALATSKKRN 566          
BLAST of Gcaud2560.t1 vs. uniprot
Match: R7QBV6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBV6_CHOCR)

HSP 1 Score: 271 bits (693), Expect = 4.710e-80
Identity = 162/496 (32.66%), Postives = 258/496 (52.02%), Query Frame = 0
Query:   76 RLYPSKIRKVPDAWNRYTYPWYVPHRVRFLTLEESRYRVLYSPVRPAASDGLGHNSAVMNAEIGVALRLGLSYSHRVSSHGSLTRDNHNAVEEFFGWGHGQIPREFIRESFCKSSLNI-----SHKTCHVCEGLKMNKTFPEMNFKHLIELPYNLTYGRMRCLRSGNLVLKNACKEQQQSFLKRNNMSHTIFQMPLLTCATNPADSHFDPTTRAYLFHSYWDQHGLMNPQRRTNNTARSSIVQRYNIPILHLSGTSKPIEFPEHALNIAIHARRGDFFKETT---RNMVSTATFGRVVREFMAIVQERGGIFARMPVIVHLYSEGAPKEKNRFQGHDISRMTQLYMDSDGSIRDAGWVTQTIRAFGSAEVARHRSTDSSLKASSSKPRRLLLFPGGLRVKLHIAADTLQSMREMISADVFIGSESGMSMHIVSTMSRGLYFLPTRLVSHEFE------CCQVTFDPRSGVLANPESVKAFWDAFAGANEASATRAF 557
            R+    +  VP +WNR   PW+ P  V+ LT +ES +R LY+  R + SDG+GH+  V+N +   A+ L L+Y+HR+ ++ SLT ++ NAVE FFGWG G++PR  I++  C               CH CE  +++     +  ++L+E+P ++   R  CL   +      C+  ++ FL  +  SHTIFQ     C+    D++F   +++  FH YWDQHGL  P    N T ++                 +PI +    LN+AIH RRGDF    T   R +     F +V+   +++VQ+ GG+F+ MP++VH+YSEG  ++ +    H I     LY DS G+ R+A W    I         +  S  ++++  S K R  +LF        HI+ DTL  + EM+SAD+FIGS+SG+S  +V ++SRG+  +P     +  +      CC + F    G+  + +    +W+A++ AN  SA+ AF
Sbjct:  117 RINGGLVFNVPASWNRLHAPWFQPDAVKLLTPKESNHRYLYAATRISTSDGIGHSMGVVNRDFNFAISLKLTYTHRLGTYSSLTFEDRNAVEAFFGWGSGEVPRTKIQQEGCVPQGGFWPEPNQTTACHTCERPRISGA---LRIQNLVEIPADM---RSNCLHPDD-----PCQSYRKRFLNEHQESHTIFQASRKACSPPATDNNF-LVSKSLFFHKYWDQHGL-RPWHPRNLTTQAG---------------ERPIRYNPEELNVAIHIRRGDFLIPETQAKRGITKDEVFAKVLINALSVVQKEGGVFSEMPIVVHIYSEGRLQKGSVLSIHMIELQDNLYYDSSGTPRNAVWWKSLI--------LKTLSRSNAIELESLKERLTVLF--------HISEDTLLCLHEMVSADIFIGSKSGLSNALVWSLSRGVVLIPYAPTINIEKGKKGNVCCSIPFANEDGIF-DTKQFSMYWNAYSQANSESASEAF 567          
BLAST of Gcaud2560.t1 vs. uniprot
Match: A0A2V3J048_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J048_9FLOR)

HSP 1 Score: 265 bits (678), Expect = 2.810e-78
Identity = 169/488 (34.63%), Postives = 254/488 (52.05%), Query Frame = 0
Query:   82 IRKVPDAWNRYTYPWYVPHRVRFLTLEESRYRVLYSPVRPAASDGLGHNSAVMNAEIGVALRLGLSYSHRVSSHGSLTRDNHNAVEEFFGWGHGQIPREFIRESFCKSSLNI-----SHKTCHVCEGLKMNKTFPEMNFKHLIELPYNLTYGRMRCLRSGNLVLKNACKEQQQSFLKRNNMSHTIFQMPLLTCATNPADSHFDPTTRAYLFHSYWDQHGLMNPQRRTNNTARSSIVQRYNIPILHLSGTSKPIEFPEHALNIAIHARRGDFFK-ETTRNMVSTATFGRVVREFMAIVQERGGIFARMPVIVHLYSEGAPKEKNRFQGHDISRMTQLYMDSDGSIRDAGWVTQTIRAFGSAEVARHRSTDSSLKASSSKPRRLLLFPGGLRVKLHIAADTLQSMREMISADVFIGSESGMSMHIVSTMSRGLYFLP------TRLVSHEFECCQVTFDPRSGVLANPESVKAFWDAFAGANEASATRAF 557
            I ++P  WNR   PW     V+FL  ++SRYR LY P R   SDG+GH+   +N E  +AL L L+Y+HRV  + SL+R +  AVE+FFGWG G++ R+ ++E  C               CHVC+    N +   MN K ++++P          L +G    +  C ++   F++ N++SH+IFQ+P  TC+    D++F  T   + F+ YW +HG + P   T+    S+              T + I      LNIAIH+RRGDF K E  R + +  TF  V+ E + ++Q  G +F+ MPV VH+YSEG   ++     H +    + Y D++G  R+  W    I       ++R R+  +      SK R    +   LRVK HI+ DTL S+  MI+ADVFIGS SG+S H+V +MSRG+  LP      T +    + CC V F+  +GV +   + + +W A+  AN  SA  +F
Sbjct:   75 IFRIPGTWNRLLSPWLKKPEVKFLNPKQSRYRYLYGPSRLMTSDGIGHSMGAINMEYNLALNLNLTYTHRVGFYSSLSRGDRFAVEDFFGWGVGEVRRKKVQEQGCSPKGGRWPDEEDMYACHVCDKPLHNGS---MNIKKVLDIPDVF-------LDAGCQNPEALCWKKLYEFMQNNSLSHSIFQLPEKTCSPPNTDANFLKTKEIF-FNKYWKKHGQL-PWMATDGYTESN--------------TQRRITLNPRELNIAIHSRRGDFLKPEIGRTLTNDTTFAAVLHEVLRVIQNTGTVFSFMPVAVHVYSEGKLLKEKALSTHSVELQDKNYYDNEGLARNEKWWKSLI-------LSRLRTLKNH---GPSKVR----WEEKLRVKFHISEDTLSSLHNMIAADVFIGSHSGLSTHLVRSMSRGVNLLPHSSGIDTEIGKKGYICCSVPFNNDNGVFSL-STFEWYWRAYVSANVDSAWYSF 521          
BLAST of Gcaud2560.t1 vs. uniprot
Match: R7QPD3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPD3_CHOCR)

HSP 1 Score: 190 bits (482), Expect = 2.180e-52
Identity = 119/303 (39.27%), Postives = 165/303 (54.46%), Query Frame = 0
Query:  264 MPLLTCATNPADSHFDPTTRAYLFHSYWDQHGLMNPQRRTNNTARSSIVQRYN---IPILHLSGTSKPIEFP---EHALNIAIHARRGDFFKETTRNMVSTATFGRVVREFMAIVQERGGIFARMPVIVHLYSEGAPKEKNRFQ-GHDISRMTQLYMDSDGSIRDAGWVTQTIRAFGSAEVARHRSTDSSLKASSSKPRRLLLFPGGLRVKLHIAADTLQSMREMISADVFIGSESGMSMHIVSTMSRG-LYFLPTRLVSHEFECCQVTFDPRSGVLANPE--SVKAFWDAFAGANEASATRA 556
            MP   CA +P  S F P  RA+ +H YW  HG+ +     + +   S   RY       L + G       P   EH L IAIHARRGDFFK   R MV  ATF RV+R+ MA +QE    FARMP+ VH+YSEG PK+  +   GHDI R+   + D+DG + D   VT         E+   +  D             ++F   LRV LH++ DT++S+ EMI+AD+F+GS SGMS+H+V +++RG +  LPTR+   +     V FDPR+G +   E   ++ +W  ++ ANE SA RA
Sbjct:    1 MPHKVCAKSPTYSKFLPEARAFFYHKYWAAHGMYSEHDSRHRSRAISSFHRYRDSWASTLRIPGVPPRGILPRLHEHELTIAIHARRGDFFK-VGRPMVPVATFSRVLRQVMAEIQEHNKTFARMPIAVHIYSEGNPKKGYKGDVGHDIKRLNSDFHDADGKVLDVVAVT---------EIFNDKKQDDLG----------IVFRNRLRVVLHVSQDTVESLHEMIAADLFLGSMSGMSLHLVGSLNRGAMQLLPTRIEHTDEWRGHVKFDPRTGHIGKKELKGMRRYWREYSDANEKSAKRA 283          
BLAST of Gcaud2560.t1 vs. uniprot
Match: R7QUC7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUC7_CHOCR)

HSP 1 Score: 178 bits (451), Expect = 3.300e-45
Identity = 129/425 (30.35%), Postives = 203/425 (47.76%), Query Frame = 0
Query:   99 PHRVRFLTLEE-----SRYRVLYSPVRPAASDGLGHNSAVMNAEIGVALRLGLSYSHRVSSHGSLTRDNHNAVEEFFGWGHGQIPREFIRESFCKSSLNISHKTCHVCEGLKMNKTFPEMN---FKHLIELPYNLTYGRM-RCLRSGNLVLKNACKEQQQSFLKRNNMSHTIFQMPLLTCATNPADSHFDPTTRAYLFHSYWDQHGLMNPQRRTNNTARSSIVQRYNIPILHLSGT---SKPIEFPEHALNIAIHARRGDFFKETTRNMVSTATFGRVVREFMAIVQERGGIFARMPVIVHLYSEGAPKEKNRFQ-GHDISRMTQLYMDSDGSIRDAGWVTQTIRAFGSAEVARHRSTDSSLKASSSKPRRLLLFPGGLRVKLHIAADTLQSMREMISADVFIGSESGMSMHIVSTMSRGLYFLP 510
            PHR R L L       S  RVL S V  A  DGLGH + ++N E+ +AL L L+YSHRVS +GSLTR +  A+E  FGWG  ++PR  +    C     ++       + +  N+         F   + +P  L    + +  R G+L     C    QSFL   +  +T+FQM    C T+   ++F  T   +    YW   G    ++ T     S   Q  N+     +     ++ +      ++I++H RRGDFF  T R ++  AT+  +       + E  G    +P+ VH++SEG P +K R +  HD++ M ++Y+D  G  R  G   + +R     +  R R+   + +               + VK+H+A DT+Q++ +MI++D FIGS SG+SM +V  + RGL  LP
Sbjct:  130 PHRPRGLALRPPPPRLSHNRVLLSSVPAAVGDGLGHRTCILNYELHLALTLRLTYSHRVSHYGSLTRRDPLAIERLFGWGRAELPRAHLLRRACAEVAYVNDSCPVPAQSVVCNRVRTRAQGGLFDQTVIIPDELAECFLQKPPREGSL--DQVCFPLVQSFLAAYSEPNTLFQMRPKLCFTDYLFTNFSQTAD-WFAEKYWA--GRFVSKKETARLLASRQQQSGNLQGAENASDVIRTRELSLDAQRVHISLHVRRGDFFNYTNRVLIPDATYVDLAARVKIALDEMVG--GNVPMTVHVFSEGVPAKKERLKDNHDVASMEKVYVDERGGRRPKGHWRRLMR-----QCRRLRAVHGAGRGWRRPD---------VEVKMHVATDTIQALHDMIASDFFIGSISGLSMQVVRNIGRGLTLLP 533          
BLAST of Gcaud2560.t1 vs. uniprot
Match: A0A2V3IYN3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYN3_9FLOR)

HSP 1 Score: 152 bits (384), Expect = 1.540e-36
Identity = 119/434 (27.42%), Postives = 198/434 (45.62%), Query Frame = 0
Query:  110 SRYRVLYSPVRPAASDGLGHNSAVMNAEIGVALRLGLSYSHRVSSHGSLTRDNHNAVEEFFGWGHGQIPREFIRESFCKSSLNISHKTCHV------CEGLKMNKTFPEMNFKHLIELPYNLTYGRMRCLRSGNLVLKNACKEQQ-----QSFLKRNNMSHTIFQMPLLTCATNPADSHFDPTTRAYLFHSYWDQHGLMNPQRRTNNTARSSIVQRYNIPILHLSGTSKPIEFPEHALNIAIHARRGDFFKETTRNMVSTATFGRVVREFMAIVQERGGIFARMPVIVHLYSEGAPKEKNRFQ-GHDISRMTQLYMDSDGSI-RDAGWVTQTIRAFGSAEVARHRSTDSSLKASSSKPRRLLLFPGGLRVKLHIAADTLQSMREMISADVFIGSESGMSMHIVSTMSRGLYFLPTRLVSHEFECCQ----VTFD 526
            SR RV  S +     DGLGH + ++N E+ +++ L LSYSHR+S++GSL+  +  AV+  FGW   ++ R+ +  + C  +  ++  TC +      CE +K+ K      F   + +P  ++     CL   N    N   +QQ      +FL   +  +T+FQ+    C      ++F   TR +  + +W +                  V   N+  L+              + +A+H RRGDFF  T R ++   TF  V       + +  G    +P+ +H++SEG   +  R +  HD S+M  +Y+D +G I RD  + TQ  R     +  +H                       + VK HIA+DT+++++ M+ +D FIGS SG+S+ ++  + RGL  LP     HE E  +    VTFD
Sbjct:   95 SRNRVFMSSIPVEVGDGLGHRTCILNYELLMSILLRLSYSHRISTYGSLSTTDRTAVDSLFGWSKNELSRDQLLATACLKTTFVND-TCEIPATHVLCERVKLRKKGGM--FDQTVMIPAYIS----DCLIQANNKAANTNNDQQCASLFSTFLSAYSEPNTLFQLRPTRCFREYLYTNFS-RTRDWFANKFWQRD-----------------VSASNVDGLNAK-----------RIQVAMHVRRGDFFNYTNRVLIGDGTFVDVAGRLSEALDDIIG--TTVPITIHMFSEGVSLQGERVKDNHDTSKMAAVYVDENGHIIRDESYWTQLFRTHTRWKRRQH-----------------------VEVKTHIASDTIEAVKLMVRSDFFIGSISGLSVQVIRHIGRGLMLLPV----HETEVGEEEHIVTFD 463          
BLAST of Gcaud2560.t1 vs. uniprot
Match: R7Q8K8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8K8_CHOCR)

HSP 1 Score: 58.9 bits (141), Expect = 3.960e-7
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 0
Query:  464 LRVKLHIAADTLQSMREMISADVFIGSESGMSMHIVSTMSRGLYFLPTRLVSH---EFECCQVTFDPRSGVLANPESVKAFWDAFAGAN 549
            L V+LHI+ DTL SM EMI+ADVF+GS S MS   + T+SRG+  L    +SH   + +     +D ++G L +PE     W  +   N
Sbjct:   16 LEVQLHISEDTLNSMHEMIAADVFMGSASSMSSGPLYTLSRGVRLL----ISHPPQQGDPLFAQYDSKAGRLIDPEEFFKAWKIYEAGN 100          
The following BLAST results are available for this feature:
BLAST of Gcaud2560.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IXX1_9FLOR2.010e-21258.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IXN9_9FLOR2.990e-16851.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBV6_CHOCR4.710e-8032.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J048_9FLOR2.810e-7834.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPD3_CHOCR2.180e-5239.27Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QUC7_CHOCR3.300e-4530.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IYN3_9FLOR1.540e-3627.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8K8_CHOCR3.960e-740.45Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 27..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..567
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 39..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..26
NoneNo IPR availableTMHMMTMhelixcoord: 24..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_296_length_31928_cov_4.500110contigNODE_296_length_31928_cov_4.500110:8309..10012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2560.t1Gcaud2560.t1Gracilaria caudata M_176_S67 malemRNANODE_296_length_31928_cov_4.500110 8309..10012 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2560.t1 ID=Gcaud2560.t1|Name=Gcaud2560.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=568bp
MSDNSNPACDSKLIKEKKHMPIRANSLPLVLFGLLFALSSVVSVAAKAYK
LTNSTVENRGVVRVANSNGKDADWSRLYPSKIRKVPDAWNRYTYPWYVPH
RVRFLTLEESRYRVLYSPVRPAASDGLGHNSAVMNAEIGVALRLGLSYSH
RVSSHGSLTRDNHNAVEEFFGWGHGQIPREFIRESFCKSSLNISHKTCHV
CEGLKMNKTFPEMNFKHLIELPYNLTYGRMRCLRSGNLVLKNACKEQQQS
FLKRNNMSHTIFQMPLLTCATNPADSHFDPTTRAYLFHSYWDQHGLMNPQ
RRTNNTARSSIVQRYNIPILHLSGTSKPIEFPEHALNIAIHARRGDFFKE
TTRNMVSTATFGRVVREFMAIVQERGGIFARMPVIVHLYSEGAPKEKNRF
QGHDISRMTQLYMDSDGSIRDAGWVTQTIRAFGSAEVARHRSTDSSLKAS
SSKPRRLLLFPGGLRVKLHIAADTLQSMREMISADVFIGSESGMSMHIVS
TMSRGLYFLPTRLVSHEFECCQVTFDPRSGVLANPESVKAFWDAFAGANE
ASATRAFLANKVHNIRR*
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