Gcaud2551.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2551.t1
Unique NameGcaud2551.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length422
Homology
BLAST of Gcaud2551.t1 vs. uniprot
Match: A0A2V3J0W2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0W2_9FLOR)

HSP 1 Score: 280 bits (717), Expect = 1.620e-87
Identity = 156/345 (45.22%), Postives = 208/345 (60.29%), Query Frame = 0
Query:   34 MTTKNIFSPHINLSDANDIRKFVNVLGPNNGQLSSIAHLINGDFADIGALVSLIHT---KVNPAPRSTSEP--ANLSLQDHNDNETVEKDPTKFTYAEVLQRRIPPPAPVQPSRLPPITPHNAEDVNSFNPDGFMLSKKGKNRLYRTALNTIGHEPKRFALLCTSDQHEPMQNPFNITRCLSEAGIREPLTLVKTGDPRKFLLFAPESCIPLLQPAYNRFHDMTVRLCGIKRLPSITVNPIGSLKDHFP----ALQLENILKHLRNEIERLESPTATWRPRLFFADSLRDHESESYTALKEKRPA---SPLQPFPPRPPIRNNVS--------WHHNTTDPPDAI 358
            M  KNIF+P +NL +   I KFV  L  +NGQLSSIAHL+ GDFA I AL S IH+   K   AP  TSE   AN + ++   NE     P+  +YA+V+++ +P  A  +PSRLP   P+ +   N F+   F LSKKG+ R+YR  + T+ HEPK FALL TS  H+ ++NPF+ITRCL+EA IR+PLTLVK+ DPRKFL+ A +S +P + PAY RF+   +R CG+ RL  + V  +  + D FP     + L N    LR+EI+RLESP  T RPR +FA+SL +HE   + ALK + P+   SP+ P  PR   RNN           HH     P+ I
Sbjct:    1 MKVKNIFNPAVNLDNPAAIAKFVQKLDLDNGQLSSIAHLVRGDFAQIDALASYIHSITGKDTAAPHDTSETSQANTTTKEATTNEC----PSTVSYAQVVEQHLPKKATPRPSRLPICEPNYSPGENYFDSQAFTLSKKGRTRIYRAEMETVSHEPKAFALLQTSADHDALKNPFSITRCLAEAVIRQPLTLVKSPDPRKFLIHAHKSAVPFIAPAYKRFYKTALRKCGVSRLQKVNVTAVSDILDLFPQSSATVDLMNFTFKLRDEIKRLESPDTTCRPRYYFAESLSEHEKSCFEALKHRNPSCDLSPMLPKGPRAQARNNGDEETRSTHILHHRVNPSPETI 341          
BLAST of Gcaud2551.t1 vs. uniprot
Match: A0A2V3IL33_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL33_9FLOR)

HSP 1 Score: 170 bits (431), Expect = 1.860e-45
Identity = 85/175 (48.57%), Postives = 110/175 (62.86%), Query Frame = 0
Query:  177 LNTIGHEPKRFALLCTSDQHEPMQNPFNITRCLSEAGIREPLTLVKTGDPRKFLLFAPESCIPLLQPAYNRFHDMTVRLCGIKRLPSITVNPIGSLKDHFP----ALQLENILKHLRNEIERLESPTATWRPRLFFADSLRDHESESYTALKEKRPASPLQPFPPRPP---IRNN 344
            + T+ HE K FALL TS  H  ++NPFNI R L+EAGIR+ L LVKT D  KFL+ AP+S +PL+ PAY RF+   +R CG+ RLP + V  +  + D  P      +L N    LR+EI+RLE P  TWRPR +FA+SLR+HE   + ALK   P+  L P PP+ P    RNN
Sbjct:    1 METVSHELKAFALLQTSADHHALRNPFNIARLLAEAGIRQRLALVKTPDLSKFLIRAPKSAVPLIAPAYKRFYQTALRHCGVLRLPEVNVTAVTDILDLLPESSATAELVNFTFKLRDEIKRLEYPNTTWRPRYYFAESLREHEKSCFEALKHSNPSCDLSPMPPKEPRAQTRNN 175          
BLAST of Gcaud2551.t1 vs. uniprot
Match: A0A2V3J2G4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2G4_9FLOR)

HSP 1 Score: 122 bits (305), Expect = 3.970e-27
Identity = 84/351 (23.93%), Postives = 150/351 (42.74%), Query Frame = 0
Query:   27 HALLQFIMTTKNIFSPHINLSDANDIRKFVNVLGPNNGQLSSIAHLINGDFADIGALVSLI-------------------------HTKVNPAPRSTSEPANLSLQDHNDNETVEKDPTKFTYAEVLQRR----------------------IPPPAPVQPSRLPPI--TPHNAEDVNSFNPDGFMLSKKGKNRLYRTALNTIGHEPKRFALLCTSDQHEPMQNPFNITRCLSEAGIREPLTLVKTGDPRKFLLFAPESCIPLLQPAYNRFHDMTVRLCGIKRLPSITVNPIGSLK----DHFPALQLENILKHLRNEIERLESPTATWRPRLFFADSLRDHESESYTALK 324
            H +L F +  + I  P  +L +   + +FV  +  N+  LS+   +  G FA     ++++                         + KV P P++ S    +S+    +N  + K  T                                 +P    ++PS +  I  T   ++ +   + + + +SKK    ++R ++   G+E K FAL+ T      +++   +    S+ GI++PLT+ +T +  +FL F P  C+P LQ AY       VR  G   LP ++V P+  L     D+   + L  ++K LR EI+RLE+    W PR +F+++LR HE + Y  L+
Sbjct:   45 HEILDFNIRVQTIIQPCASLENPESLARFVKSVAKNSSALSAARDVALGSFATFAVFITMLCSTDPKLCATDQNPSSAATDKAALQNLKVKPTPQTASTARIVSVTPKENNSRLPKRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSKRQLRPSEVSEIVKTSSTSDSIKDLDTEPYSVSKKELQHMHRRSIRACGYEEKGFALITTDPCLPAIRSANFLGSLFSKGGIKDPLTIFETPETHQFLAFGPLVCLPKLQRAYESSRMRLVRKRGFLNLPRLSVKPLNDLMEVCADNVTKIDLLQLVKCLRGEIDRLEAQELRWSPRKYFSEALRIHEKKCYEILQ 395          
BLAST of Gcaud2551.t1 vs. uniprot
Match: A0A2V3IL49_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL49_9FLOR)

HSP 1 Score: 95.1 bits (235), Expect = 5.310e-20
Identity = 57/129 (44.19%), Postives = 79/129 (61.24%), Query Frame = 0
Query:   34 MTTKNIFSPHINLSDANDIRKFVNVLGPNNGQLSSIAHLINGDFADIGALVSLIHT---KVNPAPRSTSEP--ANLSLQDHNDNETVEKDPTKFTYAEVLQRRIPPPAPVQPSRLPPITPHNAEDVNSF 157
            M  KNIF+  +NL +   I KFV  LGP NGQLSSIAHL+ GDFA IGAL S IH+   K   +P  TSEP  AN + +    NE     P+ F+YA+V+++ +   A ++PS+LP   P+ + + + F
Sbjct:    1 MKVKNIFTLAVNLDNPVAIAKFVQNLGPYNGQLSSIAHLVRGDFAQIGALASYIHSIAGKDTSSPHDTSEPSEANTTTKQARTNEC----PSTFSYAQVVKQHLTKKATLRPSKLPIFEPNYSPEEDKF 125          
The following BLAST results are available for this feature:
BLAST of Gcaud2551.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J0W2_9FLOR1.620e-8745.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IL33_9FLOR1.860e-4548.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J2G4_9FLOR3.970e-2723.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IL49_9FLOR5.310e-2044.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 278..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 369..389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_146_length_43567_cov_5.009154contigNODE_146_length_43567_cov_5.009154:39997..41262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2551.t1Gcaud2551.t1Gracilaria caudata M_176_S67 malemRNANODE_146_length_43567_cov_5.009154 39997..41262 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2551.t1 ID=Gcaud2551.t1|Name=Gcaud2551.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=422bp
MAGGAPVAPPPLPLQALYQSKADMWVHALLQFIMTTKNIFSPHINLSDAN
DIRKFVNVLGPNNGQLSSIAHLINGDFADIGALVSLIHTKVNPAPRSTSE
PANLSLQDHNDNETVEKDPTKFTYAEVLQRRIPPPAPVQPSRLPPITPHN
AEDVNSFNPDGFMLSKKGKNRLYRTALNTIGHEPKRFALLCTSDQHEPMQ
NPFNITRCLSEAGIREPLTLVKTGDPRKFLLFAPESCIPLLQPAYNRFHD
MTVRLCGIKRLPSITVNPIGSLKDHFPALQLENILKHLRNEIERLESPTA
TWRPRLFFADSLRDHESESYTALKEKRPASPLQPFPPRPPIRNNVSWHHN
TTDPPDAIAAERVAMEISLPAAPATATPRHQPANSVPNQNISALRSNRFS
TFNNQLGRSVASAPNAHIPVN*
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