Gcaud2550.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2550.t1
Unique NameGcaud2550.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length401
Homology
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BLAST of Gcaud2550.t1 vs. uniprot
Match: A0A2V3J6V2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6V2_9FLOR)

HSP 1 Score: 468 bits (1205), Expect = 1.760e-161
Identity = 257/377 (68.17%), Postives = 307/377 (81.43%), Query Frame = 0 
Query:   23 AQSTHDSIAPVLXXXXXXXXXXXXXXXXXXSIKTVPFPSLHDDLQRASLRVTHLSAETLNTLRLFCSSAVKERYDIRVVHDLLKDGLNPAAKSLLTASNSQHKRLAQVSSTLAMEYEQAANSLTECLTRATHARAQQSSRHQERQTAVASKFSELTSTRRSAQGALRAFEEADMRHAEAEQRESVARKRVVALQAAHVAAVVGGFVSARSTPFVIGAGSAAALASTFEGEVMRAREERAVHLRQRNDARDRRSQLEGNVATLVTELRECRKEAVLESTVLDSLVDCANLLRELAGVMLQAEAFWKGVSTGLQDGLLELVTAAEGREYDDGMRQRLVQVERFWEDVGSLCENAMRGVDNGLNSNEGIQGRQVDRIEWD 399
            +QS  D IAP L                  + KT+PFPSLHDDLQRASL++THLSA +L+ LRLF S+AVKER+D+ VV DLL+D L+ AA SLLTAS ++  RLA VS++LA+ +EQAA +LT CLT+ATHARA Q+ R +++QTAVA KF++L  TRR AQGALRAFE+AD RH+EAE+RE +AR+RVVALQAAHVAAVVGGFVS RSTPFVIGAGSAAALA+TFEGEV+RAREERAVHLRQRNDAR+R SQLEG+VA+LVT+LRE R+E VLES VLD+LV+ A +LRELAGVMLQAEAFWKGV+TGLQDGLLELV AAEGR  DDGM++R  QVE FW  VG +C+ AMRGVD+ LN N G++ RQV+ I WD
Sbjct:   27 SQSADDLIAPYLPLHTLHTLRNLLEKLCILTTKTIPFPSLHDDLQRASLQLTHLSARSLHALRLFRSAAVKERHDVAVVQDLLRDQLHTAAHSLLTASRAEQNRLASVSNSLALAFEQAAINLTTCLTQATHARAHQTERREQKQTAVAHKFTQLNDTRRRAQGALRAFEDADTRHSEAEERERIARRRVVALQAAHVAAVVGGFVSPRSTPFVIGAGSAAALANTFEGEVLRAREERAVHLRQRNDARERHSQLEGSVASLVTQLRESRREQVLESGVLDTLVESALVLRELAGVMLQAEAFWKGVATGLQDGLLELVNAAEGRVLDDGMKERFEQVEMFWGAVGRVCDRAMRGVDSSLNDNGGLESRQVESIAWD 403
The following BLAST results are available for this feature:
BLAST of Gcaud2550.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6V2_9FLOR1.760e-16168.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 267..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_146_length_43567_cov_5.009154contigNODE_146_length_43567_cov_5.009154:38337..39539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2550.t1Gcaud2550.t1Gracilaria caudata M_176_S67 malemRNANODE_146_length_43567_cov_5.009154 38337..39539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2550.t1 ID=Gcaud2550.t1|Name=Gcaud2550.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=401bp
MTGPSASRPPPSTSSAVEVGASAQSTHDSIAPVLPVHSLHSLRTLLDELS
ILSIKTVPFPSLHDDLQRASLRVTHLSAETLNTLRLFCSSAVKERYDIRV
VHDLLKDGLNPAAKSLLTASNSQHKRLAQVSSTLAMEYEQAANSLTECLT
RATHARAQQSSRHQERQTAVASKFSELTSTRRSAQGALRAFEEADMRHAE
AEQRESVARKRVVALQAAHVAAVVGGFVSARSTPFVIGAGSAAALASTFE
GEVMRAREERAVHLRQRNDARDRRSQLEGNVATLVTELRECRKEAVLEST
VLDSLVDCANLLRELAGVMLQAEAFWKGVSTGLQDGLLELVTAAEGREYD
DGMRQRLVQVERFWEDVGSLCENAMRGVDNGLNSNEGIQGRQVDRIEWDL
*
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