Gcaud2541.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2541.t1
Unique NameGcaud2541.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length300
Homology
BLAST of Gcaud2541.t1 vs. uniprot
Match: A0A2V3J793_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J793_9FLOR)

HSP 1 Score: 309 bits (791), Expect = 1.250e-101
Identity = 139/226 (61.50%), Postives = 174/226 (76.99%), Query Frame = 0
Query:   63 IVPDPLENLSKEARSLVEKQVQVDYKSIWMSDLEINLVLRYMNNVDAYIEWGSGGSTFNFPQFAKRAYSIEHSKNWCSRMRADISSHPELKHLQFHCVPIQRGTNGWGLMSAFEEGTYKTFKPYIDHIDNLGEQKFDVVLIDGRARVDAAIKALSYLGKHSVVIVHDAERIWTRRTYADMFTYYDIIDSVGGKGRQGLAVMRRKSKYSYLQGKHGTIQDILNKKYP 288
            ++ D L  L K+ + L+ K + V Y+SIWM  +E+N+VLR+MNN+D Y+EWGSGGST NFPQFAKRAYSIEH + WC++M   IS  PELKHLQ++CVPI RGT GWG+ S FEEG YK FK Y+D IDNL    FD+VLIDGRARVD A+KALSY+G HSVV+VHDAERIWT R YA +  YYDI+DS+GG  RQG+A+MRRK K+  L+G H  +Q + ++ YP
Sbjct:   81 LIADSLHKLEKKEQELLLKTLNVSYQSIWMGVVEVNMVLRHMNNIDTYLEWGSGGSTHNFPQFAKRAYSIEHDETWCTKMIDQISKRPELKHLQYNCVPIARGTKGWGVSSPFEEGDYKVFKKYVDQIDNLRVPIFDMVLIDGRARVDCAVKALSYIGDHSVVVVHDAERIWTHRKYARVLHYYDIVDSIGGSERQGIAIMRRKKKFQNLEGNHEAVQKMFDQIYP 306          
BLAST of Gcaud2541.t1 vs. uniprot
Match: A0A1X6P5L4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5L4_PORUM)

HSP 1 Score: 158 bits (400), Expect = 2.290e-43
Identity = 80/182 (43.96%), Postives = 110/182 (60.44%), Query Frame = 0
Query:   86 DYKSIWMSDLEINLVLRYMNNVDAYIEWGSGGSTFNFPQFAKRAYSIEHSKNWCSRMRADISSHPELKHLQFHCVPIQRGTNGWGLMSAFEEGTYKTFKPYIDHIDNLGEQKFDVVLIDGRARVDAAIKALSYLGKHSVVIVHDAERIWTRRTYADMFTYYDIIDSVGGKGRQGLAVMRRKS 267
            D   +W+S  E + +L  M     Y+E+GSGGST  F   A+RAYS+EH++ WC +M+  +++      + + C  +  GT GWG+ +AFEEG YK FK Y+D +  LGE  FDVVLIDGRARV  A+K L YL   S +I+HDA R      YA +  YYD I  V   G++G  + RRK+
Sbjct:   75 DLAGLWISSDEASRMLWAMKPGMIYLEYGSGGSTMAFAPMARRAYSVEHNEPWCKKMQQKLAAKGLTNRISYKCESVPAGTGGWGIANAFEEGDYKVFKRYVDTVTRLGEATFDVVLIDGRARVACALKVLPYLSSTSTIILHDARRAH----YAAILDYYDEIGQV--VGQRGARLFRRKA 250          
BLAST of Gcaud2541.t1 vs. uniprot
Match: A0A1X6P395_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P395_PORUM)

HSP 1 Score: 152 bits (383), Expect = 1.360e-39
Identity = 73/179 (40.78%), Postives = 108/179 (60.34%), Query Frame = 0
Query:   88 KSIWMSDLEINLVLRYMNNVDAYIEWGSGGSTFNFPQFAKRAYSIEHSKNWCSRMRADISSHPELKHLQFHCVPIQRGTNGWGLMSAFEEGTYKTFKPYIDHIDNLGEQKFDVVLIDGRARVDAAIKALSYLGKHSVVIVHDAERIWTRRTYADMFTYYDIIDSVGGKGRQGLAVMRRK 266
            K++WM+  E   +L  M     Y+E+GSGGST  F   A RAYS+EH++ WC RMR  +++      + + C P+ RGT GWG+   FEEGTY+ F+PY+D +    E  +D+VL+DGRARV  A+K L YL   S++++HDA R   +   + +  YY+ +  V   G  G+ + RRK
Sbjct:  153 KALWMTPEEATSMLGVMRKDMVYLEYGSGGSTMAFAPLAARAYSVEHNEEWCGRMRQLLAAKGLTHRVTYACTPVARGTGGWGIGHEFEEGTYRVFQPYVDAVTAFNESVYDIVLLDGRARVACALKVLPYLNDDSLLLLHDARR--DKYVRSAIGRYYEPLGEV--VGANGVRIFRRK 327          
BLAST of Gcaud2541.t1 vs. uniprot
Match: A0A1X6P1R9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1R9_PORUM)

HSP 1 Score: 115 bits (288), Expect = 2.730e-27
Identity = 70/181 (38.67%), Postives = 95/181 (52.49%), Query Frame = 0
Query:   92 MSDLEINLVLRYMNNVDAYIEWGSGGSTFNFPQFAKRAYSIEHSKNWCSRMRADISSHPELKHLQFHCVPIQR---GTNGWGLMSAFEEGTYKTFKPYIDHIDNLGEQKFDVVLIDGRARVDAAIKALSYLGKHSVVIVHDAERIWTRRTYADMFTYY-DIIDSVGGKGRQGLAVMRRKSK 268
            M+  E  L+   M     Y+E+GSGGST  F + A  AYS+EH   WC RM+  + + P   H+   C P+ R   G+ GWG  + F+   + TF+ Y+   D L    FDVVLIDGRAR+  A+  L  L   SVVI+HD  R    + Y  +  YY ++    GGKG    AV+ R  K
Sbjct:    1 MTPAEARLIRSAMFPSMRYLEYGSGGSTIPFGRLASVAYSVEHDAEWCERMKPTLIATP---HISMVCSPVARAPAGSGGWGSRTPFDAADFATFRAYVHAPDALPPAAFDVVLIDGRARLACALYVLRKLTPTSVVIIHDGNR----KRYQHVAKYYTEVGRETGGKG----AVLLRPRK 170          
BLAST of Gcaud2541.t1 vs. uniprot
Match: A0A819G2K0_9BILA (Hypothetical protein n=3 Tax=Adineta steineri TaxID=433720 RepID=A0A819G2K0_9BILA)

HSP 1 Score: 113 bits (283), Expect = 8.310e-27
Identity = 63/174 (36.21%), Postives = 97/174 (55.75%), Query Frame = 0
Query:   80 EKQVQVDYKSIWMSDLEINLVLRYMNNVDAYIEWGSGGSTFNFPQFAKRAYSIEHSKNWCSRMRADISSHPELKHL--QFHCVPIQRGTNGWGLMSAFEEGTYKTFKPYIDHIDNLGEQKFDVVLIDGRARVDAAIKALSYLGKHSVVIVHDAERIWTRRTYADMFT--YYDII 249
            E+++      ++MS+ E N++  Y+N     +E+GSG ST  F QF    YSIEH++ W   +++ I   P +  +  ++  +PI+ G  GW  +  + +G    F  YI+ + +L   KFD VLIDGRARVD A +  SYL K+S++ VHD    +T R Y    +  YY II
Sbjct:   24 EEEINKYSSLVYMSEEERNIIRLYLNKSHTMLEYGSGYSTLYFSQFVNAYYSIEHNEQWYKTIKSLIDHSPIISSIIKKYILIPIKPGYKGW--LDGYSDGNKIQFHDYINAVHSLNVNKFDRVLIDGRARVDCAFEIYSYLDKNSIIFVHD----YTNRDYYSNISKKYYKII 191          
BLAST of Gcaud2541.t1 vs. uniprot
Match: A0A818H6W9_9BILA (Hypothetical protein n=4 Tax=Adineta steineri TaxID=433720 RepID=A0A818H6W9_9BILA)

HSP 1 Score: 112 bits (279), Expect = 3.200e-26
Identity = 63/174 (36.21%), Postives = 96/174 (55.17%), Query Frame = 0
Query:   80 EKQVQVDYKSIWMSDLEINLVLRYMNNVDAYIEWGSGGSTFNFPQFAKRAYSIEHSKNWCSRMRADISSHPELKHL--QFHCVPIQRGTNGWGLMSAFEEGTYKTFKPYIDHIDNLGEQKFDVVLIDGRARVDAAIKALSYLGKHSVVIVHDAERIWTRRTYADMFT--YYDII 249
            E+++      ++MS  E N++  Y+N     +E+GSG ST  F QF    YSIEH++ W   +++ I   P +  +  ++  +PI+ G  GW  +  + +G    F  YI+ + +L   KFD VLIDGRARVD A +  SYL K+S++ VHD    +T R Y    +  YY II
Sbjct:   24 EEEINKYSSLVYMSAEERNIIRLYLNKSHTMLEYGSGYSTLYFSQFVNAYYSIEHNEQWYKTIKSLIDHSPIISSIIKKYILIPIKPGYKGW--LDGYSDGNKIQFHDYINAVHSLNVNKFDRVLIDGRARVDCAFEIYSYLDKNSIIFVHD----YTNRDYYSNISKKYYKII 191          
BLAST of Gcaud2541.t1 vs. uniprot
Match: A0A838NAY8_9ARCH (Uncharacterized protein n=1 Tax=Nitrosopumilus sp. TaxID=2024843 RepID=A0A838NAY8_9ARCH)

HSP 1 Score: 107 bits (268), Expect = 1.170e-22
Identity = 65/176 (36.93%), Postives = 97/176 (55.11%), Query Frame = 0
Query:   91 WMSDLEINLVLRYMNNVDAYIEWGSGGSTFNFPQFAKRAYSIEHSKNWCSRMRADISSHPELKHLQFHCVPIQRGTNGWGLMSAFEEGTYKTFKPYIDHIDNLGEQKFDVVLIDGRARVDAAIKALSYLGKHSVVIVHDAERIWTRRTYADMFTYYDIIDSVGGKGRQGLAVMRRK 266
            +M++ EI    R + N    +EWGSG ST  F +F K+  +IEH +NW  ++   I ++ ++ H+            GW +   FE GTY+ FK Y+D  + L E KF ++LIDGRARVD A K L  +G+H+ V VHD +R        D+  YY + D V     + LA++R+K
Sbjct:  363 FMTENEIEFFKRNLQNDSVVLEWGSGNSTLFFSRFVKKYIAIEHHENWFDKINKKIRNNTKIIHVPTTQQYSPLLGQGWNV--GFE-GTYEQFKAYVDIFETLSE-KFSIILIDGRARVDCAKKILPSIGEHTKVFVHDFKRY-----EKDLLEYYILEDRV-----ERLALLRKK 524          
BLAST of Gcaud2541.t1 vs. uniprot
Match: A0A7S1WZJ5_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1WZJ5_9CHLO)

HSP 1 Score: 101 bits (251), Expect = 8.590e-22
Identity = 61/186 (32.80%), Postives = 96/186 (51.61%), Query Frame = 0
Query:   88 KSIWMSDLEINLVLRYMNNVDAYIEWGSGGSTFNFPQFAKRAYSIEHSKNWCSRMRADISSHPELKHLQFHCVPIQRGTNGWGLMSAFEEGTYKTFKPYIDHIDNLGEQ-KFDVVLIDGRARVDAAIKALSYLGKHSVVIVHDAERIWTR---RTYADMFTYYDIIDSVGGKGRQGLAVMRRKSKY 269
            K+  M+  E+  ++  +N    ++EWGSGGST  +  F  R +SIEH K W + +  ++  +P+L    +    ++    GW   S    G+Y  F+ Y+  +DN     K+DVVL+DGRARV  A  AL +L   S ++VHD  +   R   R Y  +F +YD +  V       L V+R K ++
Sbjct:   41 KAPLMTSKEMEYIVSLLNERTTFLEWGSGGSTRCYVNFVGRYFSIEHDKAWHATIEQEVGGNPKLS---YQLANVESAPGGWRGTSW--PGSYDQFRSYVHAVDNFKPGGKYDVVLVDGRARVACAAYALRHLHPESTLLVHDFYQPRYRYLSRKYGQLFRFYDQVHRV-----DSLVVLRPKPEF 216          
BLAST of Gcaud2541.t1 vs. uniprot
Match: L8HF44_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HF44_ACACA)

HSP 1 Score: 94.0 bits (232), Expect = 7.470e-19
Identity = 53/150 (35.33%), Postives = 80/150 (53.33%), Query Frame = 0
Query:   88 KSIWMSDLEINLVLRYMNN--VDAYIEWGSGGSTFNFPQFAKRAYSIEHSKNWCSRMRADISSHPELKHLQFHCVPI---QRGTNGWGLMSAFEEGTYKTFKPYIDHIDNLGEQKFDVVLIDGRARVDAAIKALSYLGKHSVVIVHDAER 232
            +++WM D      +  +    +  Y+EWG GGST    +  ++  +IEH++ WC  +R  +     + ++   C  +   Q GT+  G      +GTY+ F  Y+D ID L    FDVV IDGRARV  A KAL Y+   SV++VHD +R
Sbjct:   97 EAMWMHDKYQKTFVDTLTRRKIKQYLEWGGGGSTLCSSRLVEQVTTIEHNEEWCKLLREQLQD-KNVTNVNLICSAVEWTQFGTSPEG------DGTYEEFHDYVDAIDTLDIPHFDVVFIDGRARVPCAKKALGYISSDSVLMVHDFQR 239          
BLAST of Gcaud2541.t1 vs. uniprot
Match: A0A1G2ITZ9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Staskawiczbacteria bacterium RIFOXYB1_FULL_37_44 TaxID=1802223 RepID=A0A1G2ITZ9_9BACT)

HSP 1 Score: 89.7 bits (221), Expect = 6.650e-18
Identity = 56/178 (31.46%), Postives = 88/178 (49.44%), Query Frame = 0
Query:   96 EINLVLRYMNNVDAYIEWGSGGSTFNFPQFAKRAYSIEHSKNWCSRMRADISSHPELKHLQFHCVPIQRGTNGWGLMSAFEEGTYKTFKPYIDHIDNLGE--QKFDVVLIDGRARVDAAIKALSYLGKHSVVIVHDAERIWTRRTYADMFTYYDIIDSVGGKG--RQGLAVMRRKSKY 269
            E + +  Y+N     +EWGSG ST  F ++AK  +SIEH   W  R++  I      K+ + +  P       W      + G   +F+ YI     LG   ++FD+V IDGRAR++  ++AL YL   +VV +HD +R      Y D   +Y I+D +G      +  ++ R K +Y
Sbjct:   22 ESDFLKSYLNKNSVALEWGSGWSTVEFAKYAKEYHSIEHDFCWYRRVKNKIG-----KNTRIYYAPPDTEDLKW--FPPEKRGDNASFRNYIKFAGVLGSLGKRFDIVFIDGRARLECFLEALDYLNSKAVVFIHDFQR----PHYWDAIKHYRIVDIIGNMAALEKNNSLCREKDRY 188          
The following BLAST results are available for this feature:
BLAST of Gcaud2541.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J793_9FLOR1.250e-10161.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P5L4_PORUM2.290e-4343.96Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6P395_PORUM1.360e-3940.78Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6P1R9_PORUM2.730e-2738.67Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A819G2K0_9BILA8.310e-2736.21Hypothetical protein n=3 Tax=Adineta steineri TaxI... [more]
A0A818H6W9_9BILA3.200e-2636.21Hypothetical protein n=4 Tax=Adineta steineri TaxI... [more]
A0A838NAY8_9ARCH1.170e-2236.93Uncharacterized protein n=1 Tax=Nitrosopumilus sp.... [more]
A0A7S1WZJ5_9CHLO8.590e-2232.80Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
L8HF44_ACACA7.470e-1935.33Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
A0A1G2ITZ9_9BACT6.650e-1831.46Uncharacterized protein n=1 Tax=Candidatus Staskaw... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 78..272
e-value: 1.5E-41
score: 144.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..299
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_146_length_43567_cov_5.009154contigNODE_146_length_43567_cov_5.009154:19268..20167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2541.t1Gcaud2541.t1Gracilaria caudata M_176_S67 malemRNANODE_146_length_43567_cov_5.009154 19268..20167 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2541.t1 ID=Gcaud2541.t1|Name=Gcaud2541.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=300bp
MFRTHLSASAAQHIRIDVLLLVACCTLLLAATTFKSDVILGQSSSSYVTN
TPNVTASIQTELIVPDPLENLSKEARSLVEKQVQVDYKSIWMSDLEINLV
LRYMNNVDAYIEWGSGGSTFNFPQFAKRAYSIEHSKNWCSRMRADISSHP
ELKHLQFHCVPIQRGTNGWGLMSAFEEGTYKTFKPYIDHIDNLGEQKFDV
VLIDGRARVDAAIKALSYLGKHSVVIVHDAERIWTRRTYADMFTYYDIID
SVGGKGRQGLAVMRRKSKYSYLQGKHGTIQDILNKKYPTTKEKSSSDST*
back to top