Gcaud2534.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2534.t1 vs. uniprot
Match: A0A5J5CY97_9PERO (Uncharacterized protein n=1 Tax=Etheostoma spectabile TaxID=54343 RepID=A0A5J5CY97_9PERO) HSP 1 Score: 63.2 bits (152), Expect = 2.800e-8 Identity = 54/167 (32.34%), Postives = 77/167 (46.11%), Query Frame = 0
Query: 17 IDSSGSVNTMEFAMQKYFIQDTAAIIGLDPRAR-----FAAGQYGNRAYLISGLTGDVSLFNRQVNSAQFQNDSATSMGSAIEFCDNQLRSE---SGDINKIVLFGDGRNNMGADPV--SRANEFRAQNGGEVCTVGVGF-IDDQGKQTLKDIAGSDERVFLVDHSF 172
+DSS SV F K F+ A + R A GQY A + GLT +++L +RQ+ SA FQND T++ A+EF LR SG K+VLF DGR+ +P R E A E+ + VG +++ +TL D+ + H F
Sbjct: 433 MDSSASVGQKNFQTSKAFVHRLAERFLTSEKKRGATVNVAVGQYSRSASMEQGLTTNLTLLSRQIESATFQND-GTNVLEAMEFAMKNLRGRGDASGGKKKLVLFSDGRSQAVTEPQLEKRVREV-ADARVELFVISVGSQVNEANLRTLVSRGRRDDLTYAQRHLF 597
BLAST of Gcaud2534.t1 vs. uniprot
Match: A0A2V3IQ26_9FLOR (Matrilin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ26_9FLOR) HSP 1 Score: 60.5 bits (145), Expect = 1.980e-7 Identity = 54/183 (29.51%), Postives = 84/183 (45.90%), Query Frame = 0
Query: 11 VNLCFAIDSSGSVNTMEFAMQKYFIQDTAAIIGLD-------PRARFAAGQYGNRAYLISGLTGDVSLFNRQVNSAQFQNDSATSMGSAIEFCDNQLRSESGDINKIVLFGDGRNNMGADPVSRANEFRAQNGGEVCTVGVGFIDDQGKQTLKDIAGSDERVFLVDHSFELLFLVEDLVNDIC 186
+N+CFAID SGS++ +F I+ T AI+ + P + +A + + A LI T D++ Q Q TS G+A++ C Q+ S + D IVL DG +N S A + NG + T+G+G +L+ IA S + VD +E +V+ IC
Sbjct: 77 LNVCFAIDESGSISPTDF------IEQTEAIVAIAQELSTFAPGSTLSAVGFSSFAELIQSPTTDINGEFVQAIQGNSQLGGTTSSGAALQLCQTQIASAA-DPRIIVLLTDGADNTMPFGTSVAGGIK-NNGIIIITIGIG--SGINAPSLRSIASSPDLFIFVDDFSSFEDSIEVIVDTIC 249
BLAST of Gcaud2534.t1 vs. uniprot
Match: M7B9T5_CHEMY (Collagen alpha-6(VI) chain n=1 Tax=Chelonia mydas TaxID=8469 RepID=M7B9T5_CHEMY) HSP 1 Score: 58.5 bits (140), Expect = 1.230e-6 Identity = 51/181 (28.18%), Postives = 84/181 (46.41%), Query Frame = 0
Query: 12 NLCFAIDSSGSVNTMEFAMQKYFIQDTAAIIGLDPRA-RFAAGQYGN--RAYLISGLTGDVSLFNRQVNSAQFQNDSATSMGSAIEFCDNQLRSESGD-INKI-VLFGDGRNNMGADPVSRANEFRAQNGGEVCTVGVGFIDDQGKQTLKDIAGSDERVFLVDHSFELLFLVEDLVNDICG 187
++ F ID SGS+ +F K F+ + + RF QY + + + V+ V Q Q+ T+ G A+ + + + D + K+ ++ DG + D V++A E Q G + VGVG+ K+ LKDIAG++ER+F V+ L + D+V DIC
Sbjct: 429 DIYFLIDGSGSIFPNDFQDMKVFMNEMILTFPVSANGVRFGVVQYASTPQTEFVISQYSSVNQLKEAVRVIQ-QSGGGTNTGDALRYMKSLFAKATRDNVPKLLIVITDGESQ---DQVTKAAEELRQEGIVIYAVGVGYAV---KKELKDIAGTEERMFFVNDFDSLKLIKHDIVQDICS 602
BLAST of Gcaud2534.t1 vs. uniprot
Match: UPI001CA9B311 (LOW QUALITY PROTEIN: collagen alpha-4(VI) chain n=2 Tax=Chelonioidea TaxID=27791 RepID=UPI001CA9B311) HSP 1 Score: 58.5 bits (140), Expect = 1.260e-6 Identity = 51/181 (28.18%), Postives = 84/181 (46.41%), Query Frame = 0
Query: 12 NLCFAIDSSGSVNTMEFAMQKYFIQDTAAIIGLDPRA-RFAAGQYGN--RAYLISGLTGDVSLFNRQVNSAQFQNDSATSMGSAIEFCDNQLRSESGD-INKI-VLFGDGRNNMGADPVSRANEFRAQNGGEVCTVGVGFIDDQGKQTLKDIAGSDERVFLVDHSFELLFLVEDLVNDICG 187
++ F ID SGS+ +F K F+ + + RF QY + + + V+ V Q Q+ T+ G A+ + + + D + K+ ++ DG + D V++A E Q G + VGVG+ K+ LKDIAG++ER+F V+ L + D+V DIC
Sbjct: 887 DIYFLIDGSGSIFPNDFQDMKVFMNEMILTFPVSANGVRFGVVQYASTPQTEFVISQYSSVNQLKEAVRVIQ-QSGGGTNTGDALRYMKSLFAKATRDNVPKLLIVITDGESQ---DQVTKAAEELRQEGIVIYAVGVGYAV---KKELKDIAGTEERMFFVNDFDSLKLIKHDIVQDICS 1060
BLAST of Gcaud2534.t1 vs. uniprot
Match: A0A7K7AVH9_9AVES (CO6A6 protein (Fragment) n=4 Tax=Nothoprocta TaxID=8806 RepID=A0A7K7AVH9_9AVES) HSP 1 Score: 56.2 bits (134), Expect = 7.670e-6 Identity = 44/185 (23.78%), Postives = 88/185 (47.57%), Query Frame = 0
Query: 12 NLCFAIDSSGSVNTMEFAMQKYFIQDTAAIIGLDPR-ARFAAGQYGNRAY--LISGLTGDVSLFNRQVNSAQFQNDSATSMGSAIEFCDN----QLRSESGDINKIVLFGDGRNNMGADPVSRANEFRAQNGGEVCTVGVGFIDDQGKQTLKDIAGSDERVFLVDHSFELLFLVEDLVNDICGLH 189
++ F +D SGS+N +F K F+ +T + + RF QY R + G + + + + +Q T G+A+ F + +R+ I ++ G+ ++ + A E R QN + + +G + + ++ L++IAG+ ++VFLV+ L+ + D+V DIC ++
Sbjct: 401 DIYFLVDGSGSINVSDFKDMKTFMNETIRMFQVGANMVRFGVVQYAERTRTEFVIGQHNSIKALSEAIWN-MWQIGGGTQTGNALRFMKSLFKKTVRNNVPQILVVITDGESQDKV----AQSAKELREQN---IVILAIG-VKNAVQRELEEIAGTKDKVFLVNDYNSLMLINHDIVQDICSMN 576 The following BLAST results are available for this feature:
BLAST of Gcaud2534.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2534.t1 ID=Gcaud2534.t1|Name=Gcaud2534.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=194bpback to top |