Gcaud2529.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2529.t1 vs. uniprot
Match: A0A2V3J0Q8_9FLOR (U2 small nuclear ribonucleoprotein B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Q8_9FLOR) HSP 1 Score: 311 bits (797), Expect = 2.010e-104 Identity = 178/256 (69.53%), Postives = 194/256 (75.78%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKVRLRRLLHAAFSPYGQVVHIVAEKSLALRGQAFITFLTQASATAALRKLHATEFMGKQISVSYARSLSDKAGSDKLGGDSKLPRKKRAAKRRADQQATKRARMEAA----------------SNIAPVQPPTNGVTAVREPPPMPAPAVPNRILFAQNLPRSVEREGKKVSLVDVLSDLFARFAGFVEVRSVPANDTIAFVEFGNEAEAAVALSGLQHHPLGIPPQPITLSFANK 240
MDAPAPCRTLYVRNLPDKLKK RLRRLLHAA SPYG+VVHIVAEKS+ LRGQAFITF TQASATAALRKLHA+EFMG ISVSYAR+LSDKA S+KLGGDS L R KRAAKRRAD A KR + AA S P PP + A P P+ APAVPNRILF QN+P ++++ KK + DVLSDLFARFAGFVEVRSVP TIAFVEF +E EAAVALSGL HPLG PPQPI +SFANK
Sbjct: 1 MDAPAPCRTLYVRNLPDKLKKHRLRRLLHAACSPYGRVVHIVAEKSIPLRGQAFITFHTQASATAALRKLHASEFMGNHISVSYARALSDKAASEKLGGDSTLSRNKRAAKRRADALAVKRDHIAAAEQQQQQHALASTAVPSSTAMPNAPP---IVAAIVPHPIAAPAVPNRILFVQNIPTALDKHAKKELVSDVLSDLFARFAGFVEVRSVPGKHTIAFVEFSSEQEAAVALSGLNAHPLGDPPQPIHVSFANK 253
BLAST of Gcaud2529.t1 vs. uniprot
Match: R7QCR0_CHOCR (\Probable U2 small nuclear ribonucleoprotein B (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCR0_CHOCR) HSP 1 Score: 151 bits (381), Expect = 2.150e-43 Identity = 78/106 (73.58%), Postives = 90/106 (84.91%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKVRLRRLLHAAFSPYGQVVHIVAEKSLALRGQAFITFLTQASATAALRKLHATEFMGKQISVSYARSLSDKAGSDKLGGDSKLPRK 106
MDA PCRTLYVRNLPDKL K +LRRLLHAAF+P+G VV IVAEK+L LRGQAFITF Q+SAT ALRK HATEF+G+ +SV+YAR++SD+A S KLGGDS L RK
Sbjct: 1 MDANPPCRTLYVRNLPDKLAKAKLRRLLHAAFTPHGHVVWIVAEKTLKLRGQAFITFEQQSSATQALRKTHATEFLGRVLSVTYARAVSDRAASAKLGGDSALSRK 106
BLAST of Gcaud2529.t1 vs. uniprot
Match: C1EBP4_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EBP4_MICCC) HSP 1 Score: 132 bits (331), Expect = 2.200e-34 Identity = 101/246 (41.06%), Postives = 134/246 (54.47%), Query Frame = 0
Query: 2 DAPAPCRTLYVRNLPDKLKKVRLRRLLHAAFSPYGQVVHIVAEKSLALRGQAFITFLTQASATAALRKLHATEFMGKQISVSYARSLSDKAGSDKLGGDSKLPRKKRAAKRRADQQATKR------ARMEAASNIAPVQPPTNGVTA-VREPPPMPAPAVPNRILFAQNLPRSVEREGKKVSLVDVLSDLFARFAGFVEVRSVPANDTIAFVEFGNEAEAAVALSGLQHHPLGIPPQPITLSFANK 240
D P PC T+YV NL +K KK L + L A F +G+++ IVA KS LRGQA++ F ASATAA+R + F K + ++YA++ SD + D + AKR+A+ QA ++ A +AAS GVTA VR P P PN ILF Q LP + + +LS LF +F GF EVR V A IAFVEF +A+A+VALSGLQ + P +TL+FA K
Sbjct: 3 DIP-PCATIYVNNLNEKTKKDELVKSLQAIFGQFGKIIDIVASKSYKLRGQAWVVFADVASATAAMRAMQEFPFYDKPMRIAYAKTKSDATAKAEGTFDPSARDPEMRAKRKAESQAAEKESXXXXAERDAAS----------GVTAKVRTDPSAP----PNEILFVQGLPGA--------TTAAMLSMLFQQFPGFKEVRMVEAKPGIAFVEFETDAQASVALSGLQGFKIN-PTHSMTLAFAAK 224
BLAST of Gcaud2529.t1 vs. uniprot
Match: D0N2K1_PHYIT (U1 small nuclear ribonucleoprotein A n=10 Tax=Phytophthora TaxID=4783 RepID=D0N2K1_PHYIT) HSP 1 Score: 130 bits (327), Expect = 1.100e-33 Identity = 92/239 (38.49%), Postives = 138/239 (57.74%), Query Frame = 0
Query: 2 DAPAPCRTLYVRNLPDKLKKVRLRRLLHAAFSPYGQVVHIVAEKSLALRGQAFITFLTQASATAALRKLHATEFMGKQISVSYARSLSDKAGSDKLGGDSKLPRKKRAAKRRADQQATKRARMEAASNIAPVQPPTNGVTAVREPPPMPAPAVPNRILFAQNLPRSVEREGKKVSLVDVLSDLFARFAGFVEVRSVPANDTIAFVEFGNEAEAAVALSGLQHHPLGIPPQPITLSFANK 240
D P P TLY+ NL DK+K R++ L+A S YG+++ IV ++ LRGQA++TF SA++ALR ++ T K + + +A+ +D + S +PR+KR + +QQ TK+ +A++N + T TA + P MPA +PN+ILF + LP S +E +L LF ++ GF EVR VP +AFVEFG+EA+AA+AL GL L P + + +SFA K
Sbjct: 15 DVP-PNHTLYLNNLNDKIKADRMKATLYATLSQYGKILEIVMGRARRLRGQAWVTFDDVPSASSALRTVNGTTLFDKPVVIHFAKEKADVIARRE---GSFVPREKRKRDPKPEQQTTKK---QASANGSAAA--TGSSTAAQ--PRMPAQNLPNKILFLEELPESCNKE--------MLGVLFKQYQGFKEVRMVPGKKGLAFVEFGDEAQAAIALQGLFGFKL-TPTEALKVSFAKK 233
BLAST of Gcaud2529.t1 vs. uniprot
Match: A0A662Y965_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y965_9STRA) HSP 1 Score: 124 bits (310), Expect = 3.990e-31 Identity = 92/239 (38.49%), Postives = 132/239 (55.23%), Query Frame = 0
Query: 2 DAPAPCRTLYVRNLPDKLKKVRLRRLLHAAFSPYGQVVHIVAEKSLALRGQAFITFLTQASATAALRKLHATEFMGKQISVSYARSLSDKAGSDKLGGDSKLPRKKRAAKRRADQQATKRARMEAASNIAPVQPPTNGVTAVREPPPMPAPAVPNRILFAQNLPRSVEREGKKVSLVDVLSDLFARFAGFVEVRSVPANDTIAFVEFGNEAEAAVALSGLQHHPLGIPPQPITLSFANK 240
D P P TLY+ NL DK+K+ R++ L++ FS +G+++ IV ++ LRGQA++TF ASA+ ALR ++ + K V +A+ DKA + +PR+KR KR A K ++ A + V PPP PA VP++ILF Q LP S +E +LS LF ++ GF EVR VP +AFVEFG+EA+A++AL GL L P + +SFA K
Sbjct: 13 DVP-PNHTLYLNNLNDKIKQDRMKAALYSGFSQHGKILEIVMGRARRLRGQAWLTFDDIASASNALRAMNGSVLFDKPAVVRFAK---DKADVIARREGTFVPREKR--KREPKPAADKATQLPGAKKQVGENGSAAAPSPVALPPPPPAQNVPHKILFLQELPESCNKE--------MLSVLFKQYHGFKEVRMVPGKKGLAFVEFGDEAQASIALQGLFGFKL-TPTDALKVSFAKK 236
BLAST of Gcaud2529.t1 vs. uniprot
Match: A0A5B8MSV7_9CHLO (U1 small nuclear ribonucleoprotein A n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MSV7_9CHLO) HSP 1 Score: 120 bits (302), Expect = 5.410e-30 Identity = 86/235 (36.60%), Postives = 125/235 (53.19%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKVRLRRLLHAAFSPYGQVVHIVAEKSLALRGQAFITFLTQASATAALRKLHATEFMGKQISVSYARSLSD-------------KAGSDKLGGDSKLPRKKRAAKRRADQQATKRARMEAASNIAPVQPPTNGVTAVREPPPMPAPAVPNRILFAQNLPRSVEREGKKVSLVDVLSDLFARFAGFVEVRSVPANDTIAFVEFGNEAEAAVALSGLQ 222
+D P +T+YV NL +KL K LR+ LHA FS +G+++ IV K+ LRGQA++ F SAT ALR + F K + ++YA++ SD KA + ++ + + +KRAA R+ + ++A A + +A G EP P+ ILF QNLP + + +++ LF +F GF EVR V IAFVEFGNE E++VALSGLQ
Sbjct: 3 IDGSLPNQTVYVSNLYEKLSKDELRKSLHAVFSQFGKILDIVCMKNYRLRGQAWVVFEDITSATNALRLMQGFPFYDKPMKIAYAKTKSDAVAKLDGTYVSRDKAETARVNKEKREALQKRAAMRKGGSRPDQQAPFAAGAALA-------GTLDSEEP--------PHNILFVQNLPPATSQA--------MIAMLFEQFPGFKEVRMVETRPGIAFVEFGNEMESSVALSGLQ 214
BLAST of Gcaud2529.t1 vs. uniprot
Match: A0A8B7YWT6_ACAPL (U1 small nuclear ribonucleoprotein A-like n=2 Tax=Valvatida TaxID=41166 RepID=A0A8B7YWT6_ACAPL) HSP 1 Score: 120 bits (302), Expect = 6.590e-30 Identity = 95/254 (37.40%), Postives = 131/254 (51.57%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKVRLRRLLHAAFSPYGQVVHIVAEKSLALRGQAFITFLTQASATAALRKLHATEFMGKQISVSYARSLSDKAGSDKLGGDSKLPRKKRAAKRRADQ---QATKRARMEAASNIAPVQPPTNG-----------VTAVREPPPMPAPAVPNRILFAQNLPRSVEREGKKVSLVDVLSDLFARFAGFVEVRSVPANDTIAFVEFGNEAEAAVALSGLQHHPLGIPPQPITLSFANK 240
M+ P P +T+Y+ NL +K+KK L++ L+A FS +GQ++ IVA K+L +RGQAF+ F SAT ALR + F K + + YA+S SD KL G + +PR+KR KR+ D Q+ K + A +N AP PP G P PN ILF NLP + +L LF +F GF EVR VP IAFVEF NE ++ +A LQ + P + +S+A K
Sbjct: 1 MNVP-PNQTIYINNLNEKIKKDELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVVFKDINSATNALRSMQGFPFYEKPMRIQYAKSQSDAVA--KLQG-TYVPREKRPEKRKPDPTPAQSKKSKKQAANANQAP--PPMMGQXXXXXXXXXXXXXXXXXXXXXLPDQPNAILFLTNLPEETNEQ--------MLKMLFTQFQGFKEVRLVPGRHDIAFVEFENETQSGIAKDALQGFKI-TPTAAMKISYAKK 239
BLAST of Gcaud2529.t1 vs. uniprot
Match: A0A1B6J3Y7_9HEMI (Uncharacterized protein n=4 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6J3Y7_9HEMI) HSP 1 Score: 120 bits (301), Expect = 8.820e-30 Identity = 86/243 (35.39%), Postives = 126/243 (51.85%), Query Frame = 0
Query: 6 PCRTLYVRNLPDKLKKVRLRRLLHAAFSPYGQVVHIVAEKSLALRGQAFITFLTQASATAALRKLHATEFMGKQISVSYARSLSDKAGSDKLGGDSKLPRKKRAAKRRADQQATKRARMEAASNIAPVQPPTNGVTAVREPPPMPAPAV--------PNRILFAQNLPRSVEREGKKVSLVDVLSDLFARFAGFVEVRSVPANDTIAFVEFGNEAEAAVALSGLQHHPLGIPPQPITLSFANK 240
P T+Y+ NL +K+KK L++ L+A FS +GQ++ I+A K++ +RGQAF+ F AS+T ALR + F K + + YA++ SD K G ++ P+K + D K+ + +AA A V + T V++PPP+ PN+ILF NLP +LS LF +F GF EVR VP IAFVEF NE ++ A L + P + +SFA K
Sbjct: 5 PSHTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIIALKTMKMRGQAFVIFKEIASSTNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMK-GTYAERPKKPKKTVPHDDPAEAKKVKRKAAKEQARVYQQQSAPTPVQQPPPLQTGVAAASVPEQPPNQILFLTNLPDETSEM--------MLSMLFNQFPGFKEVRLVPNRHDIAFVEFENELQSGAAKVALNGFKI-TPTHAMKISFAKK 237
BLAST of Gcaud2529.t1 vs. uniprot
Match: A0A7S0HCA2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HCA2_9EUKA) HSP 1 Score: 121 bits (303), Expect = 9.960e-30 Identity = 89/253 (35.18%), Postives = 131/253 (51.78%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKVRLRRLLHAAFSPYGQVVHIVAEKSLALRGQAFITFLTQASATAALRKLHATEFMGKQISVSYARSLSDKAGSDKLGGDSKLPRK-KRAAKRRADQQATKRARMEAASNIAPVQPPTNGVTAVRE------------PPPMPAPAVPNRILFAQNLPRSVEREGKKVSLVDVLSDLFARFAGFVEVRSVPANDTIAFVEFGNEAEAAVALSGLQHHPLGIPPQPITLSFANK 240
M PAP T+YV N+ +K+ K L++ L+AAFS +G ++ ++A K+ +RGQAF+ F +AT A+R++ F K + +SYA S SD KL G + K +RA+KR+A A + V AV E PP P A+PN+ILF +NLP V +LS LF +F GF EVR VP IAFVEF N+ ++ A+ GLQ+ + P + +++A +
Sbjct: 30 MAEPAPRETIYVNNINEKVSKDELKKSLYAAFSQFGPILDVIALKTFKMRGQAFVVFRDITAATQAVRQMQGFPFYEKPMMISYANSKSDAVA--KLDGSYEAKDKAERASKRKAXXXXXXXXXXXALAKPKEVAEAGVATPAVGEAVAAAPVERKKAPPSAPTVALPNQILFVENLPDQVNEM--------MLSMLFQQFPGFKEVRLVPGKAGIAFVEFENDVQSGTAMQGLQNFKI-TPTNLMKITYAKR 271
BLAST of Gcaud2529.t1 vs. uniprot
Match: A0A1Y1IC41_KLENI (Putative RNA recognition motif containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IC41_KLENI) HSP 1 Score: 120 bits (301), Expect = 1.180e-29 Identity = 93/256 (36.33%), Postives = 139/256 (54.30%), Query Frame = 0
Query: 5 APCRTLYVRNLPDKLKKVRLRRLLHAAFSPYGQVVHIVAEKSLALRGQAFITFLTQASATAALRKLHATEFMGKQISVSYARSLSDKAGSDKLGGDSKLPRKKRAAKRRADQQATKRARMEAASNIAPVQ-----------------PPTNGVTAVREPPPMP---APAVPNRILFAQNLPRSVEREGKKVSLVDVLSDLFARFAGFVEVRSVPANDTIAFVEFGNEAEAAVALSGLQHHPLGIPPQPITLSFANK 240
AP +T+YV NL +K+KK +++ L+A FS +G+++ IV K+L LRGQA++ F +AT ALR++ F K + ++YA++ SD K G K++A + R ++A KRA AA+ P P G PPPM APA PN +LF +NLP E K+ +LS LF +F GF EVR + + IAFVEF +E ++ VA+SGLQ + + P P+ +++A K
Sbjct: 11 APNQTIYVSNLNEKIKKEEMKKSLYAVFSQFGKILDIVNLKTLKLRGQAWVVFDDITAATNALRQMQGFPFYDKPMKIAYAKTKSDAVS--KADGTFVPREKRKAIEEREKEKARKRA---AAAGPVPAALXXXXXXXXXXXXXXXXXPAYGYGM---PPPMAVPEAPAPPNNLLFVENLPL----EASKL----MLSTLFNQFPGFKEVRMIESKPGIAFVEFSDENQSTVAMSGLQGYRI-TPTNPMLITYAKK 249 The following BLAST results are available for this feature:
BLAST of Gcaud2529.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2529.t1 ID=Gcaud2529.t1|Name=Gcaud2529.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=241bpback to top |