Gcaud2518.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2518.t1
Unique NameGcaud2518.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length861
Homology
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BLAST of Gcaud2518.t1 vs. uniprot
Match: A0A2V3IBB6_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBB6_9FLOR)

HSP 1 Score: 211 bits (536), Expect = 1.580e-58
Identity = 110/188 (58.51%), Postives = 136/188 (72.34%), Query Frame = 0 
Query:  546 MRSRITSAKAELLAADLAPTQP-RRRILPAALYFAGLKPGPISRYRRALTTAIPGWALLSISFVGRMIGEILVHDPMAPRVIATMKALGFRHLAELDTVTDARFKDRTLSADENLLRNAHACYNRYKRAVDTPNAAARAWFQQACMVLKERYPELFTKDSRRRYDRLRDALSERRAARETAPISDATS 732
            M++RI  AKA+LL +DLAP  P RR+  P ALYFAG++ GPI RYRRALTTA+PGWAL SISFVGR IGE+LVH  +A R IATMKALGFRHL +LD V D RFKDR L+ +EN+LRN HAC+ R+++A  TP  +AR W+  A   L  R+P LFT+    +Y  LR  L + R AR   P+SDA+S
Sbjct:    1 MQTRIAHAKAKLLHSDLAPVPPPRRQAQPIALYFAGMQRGPIGRYRRALTTALPGWALCSISFVGRQIGELLVHKSLADRAIATMKALGFRHLHQLDPVMDPRFKDRGLTTEENILRNVHACHYRFQQAASTPIPSARKWYLNAAARLTARFPALFTEVQAAQYQELRQRLLKAREARLQPPVSDASS 188
[Close]
BLAST of Gcaud2518.t1 vs. uniprot
Match: A0A2V3INH6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INH6_9FLOR)

HSP 1 Score: 80.9 bits (198), Expect = 2.440e-12
Identity = 57/155 (36.77%), Postives = 77/155 (49.68%), Query Frame = 0 
Query:  491 EPYRPATDALCTGNDAQGRRADRDSAPNPHAPHERKTWAQIAAQRRPNLADLTEEMRSRITSAKAELLAADLAPTQPRRRILP----AALYFAGLKPGPISRYRRALTTAIPGWALLSISFVGRMIGEILVHDPMAPRVIATMKALGFRHLAELD 641
            +P  PA   L    DAQ   A +   P        KTWAQIA  +     +L   M+ R+ + K  L  A+LAPT   RRI       A YF  ++ GPI  +RR LT  +PGWA+LS+SF+ R   +I  H      +I +MK  G+ HL + D
Sbjct:  273 QPATPAKGML----DAQEGTASQQKTP--------KTWAQIAMAQ-----ELRPAMKDRLRATKEVLRTANLAPT---RRIAAKPNKVAPYFPNVRKGPIGEHRRILTRFLPGWAVLSLSFICRSTADIFTHALSQRPLITSMKLSGYTHLTDYD 407
The following BLAST results are available for this feature:
BLAST of Gcaud2518.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IBB6_9FLOR1.580e-5858.51Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3INH6_9FLOR2.440e-1236.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 367..394
NoneNo IPR availableCOILSCoilCoilcoord: 412..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 492..524
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 793..817
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 726..757
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 827..860
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 719..860

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1648_length_9314_cov_21.590589contigNODE_1648_length_9314_cov_21.590589:5871..8453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2518.t1Gcaud2518.t1Gracilaria caudata M_176_S67 malemRNANODE_1648_length_9314_cov_21.590589 5871..8453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2518.t1 ID=Gcaud2518.t1|Name=Gcaud2518.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=861bp
MEKATALAAARAAARTANEALQSATRGSSVTPIARALSAPAGALNVRKNP
APTRDDEEERTADMRSPSRDAATAQNANATDVGRETATDDATTQTQPVTA
MDGEEAAADTGSFTDSDEILPDPKTLPHTSAPDSGLHRTDHRSVIISSAG
RRNTTTKSAHSGRAPDWNEDPEPQTPNESREPRSVGLTTPKGVRSKSVNA
QAASSNPQGSTDADADRAARVATPTPRSEARTSQTKPILGNTPASSAEAL
KEKFRAIRNVLKCQSCLSEGSLVLNGSTAKKGDLIAKCNLCTRRTTGARL
RTAIEQAITQCGLREKYPVHVEAESTQQTTTERRYTGRGVTPAITDVLRS
QIVEAVASQTRELTSKVLALQDVIEDLRTELEDTKADNQMLRATARQGVT
GGSLDAEQAGLISELRAELRTAQKQNRELAQELRELKNGDTKCGGAATRP
RHEGRAMTDFPRLEAGQRVTDHQGATTEREAAAMEAAQDGEPYRPATDAL
CTGNDAQGRRADRDSAPNPHAPHERKTWAQIAAQRRPNLADLTEEMRSRI
TSAKAELLAADLAPTQPRRRILPAALYFAGLKPGPISRYRRALTTAIPGW
ALLSISFVGRMIGEILVHDPMAPRVIATMKALGFRHLAELDTVTDARFKD
RTLSADENLLRNAHACYNRYKRAVDTPNAAARAWFQQACMVLKERYPELF
TKDSRRRYDRLRDALSERRAARETAPISDATSSSSSDEESSSTESSSSPS
TARMTDEEGFTVVTRRKKGGSGDLSGAAPAQKTAQEPGTESERAQPGETR
GERTQLGETHEDMDTGEEAVSDGVQATAPEPKQSVATSAKPTQAEQPTRD
NECKGQSPTV*
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