Gcaud2504.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2504.t1
Unique NameGcaud2504.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length273
Homology
BLAST of Gcaud2504.t1 vs. uniprot
Match: A0A2V3IIS7_9FLOR (Endonuclease V n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIS7_9FLOR)

HSP 1 Score: 359 bits (922), Expect = 1.180e-122
Identity = 167/251 (66.53%), Postives = 205/251 (81.67%), Query Frame = 0
Query:   14 LISSWVAAQEQIAHKVDCSDNNNWGDFFTPDGFKPKRELFVAGADVSFSTTEDLAIGTLAVVKLFSDASHQLVFSKSYKVSMAQPYVPTFLGFREAPVISTLLKQLPEEVRTSIDCLLVDGNGLLHPRKAGLACHVGVEHEIPCIGVSKTLLCVDGLDEKTIRERAAANGLLGIDVIGESGFLWGKAIMTGNAQRKPIYVSIGHRVSLETAVRLVLTLCEYRVPAPVRYADLHSRAFIRGECNDLFEAEQF 264
            ++SSW   QE +A  VD +DNN+W  FF P GF+  R+LFVAG D+SFSTTEDL+IGT+A+VKL  D+  QLV+S S +VS+  PYVP+FLGFREAP+ISTL+K LP  VR S+DCLLVDGNG+LHPRKAGLAC VG+   IPC+GVSK LLCVDGL+EKT RE  A++    IDVIG SGFLWGKAIMTGNA+ KPI+VS+GHRVSL T+ RLV  LCE+R+P+P+R+AD+HSRA++RGECNDLF  E+F
Sbjct:   18 IVSSWTRMQEDLASNVDYTDNNDWSHFFKPTGFQADRDLFVAGVDISFSTTEDLSIGTIAIVKLRRDSRQQLVYSHSREVSVQYPYVPSFLGFREAPIISTLMKHLPLRVRCSLDCLLVDGNGVLHPRKAGLACQVGIGESIPCVGVSKNLLCVDGLNEKTFREYIASSHSNEIDVIGRSGFLWGKAIMTGNAKSKPIFVSVGHRVSLITSARLVTALCEFRIPSPIRFADMHSRAYLRGECNDLFMEEEF 268          
BLAST of Gcaud2504.t1 vs. uniprot
Match: R7QG07_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG07_CHOCR)

HSP 1 Score: 302 bits (773), Expect = 4.070e-100
Identity = 152/252 (60.32%), Postives = 184/252 (73.02%), Query Frame = 0
Query:   14 LISSWVAAQEQIAHKVDCSDNNNWGDFFTPDGFKPKRELFVAGADVSFST-TEDLAIGTLAVVKLFSDASHQLVFSKSYKVSMAQPYVPTFLGFREAPVISTLLKQLPEEVRTSIDCLLVDGNGLLHPRKAGLACHVGVEHEIPCIGVSKTLLCVDGLDEKTIRERAAANGLLGIDVIGESGFLWGKAIMTGNAQRKPIYVSIGHRVSLETAVRLVLTLCEYRVPAPVRYADLHSRAFIRGECNDLFEAEQF 264
            L   W+A Q  IA +V   D N +  FF+   F P R+LF+AGADVSFST   D AIGT  VV L    S  LV+S+S  VSM  PY+PTFLGFREAPV+S +L  LP  VR  IDC+L+DGNGLLHPRKAGLACHVGV+  +P IGVSK+LLCVDGL EK +RE AAA+G  G++VIG SG LWG+A++TGNA+ KPIYVSIG+RVSL TA  LV  +C YR+P P+R ADLHSRA +RGE   +++ E F
Sbjct:   10 LTKEWLARQGDIARRVVKEDRNGFATFFSDTCFSPARDLFIAGADVSFSTRVPDHAIGTFTVVILRKSGSLDLVYSRSKTVSMPHPYIPTFLGFREAPVVSAMLAALPAIVRNRIDCVLLDGNGLLHPRKAGLACHVGVDENLPTIGVSKSLLCVDGLVEKEVRESAAAHGAEGVNVIGASGTLWGRALLTGNAKVKPIYVSIGNRVSLNTASYLVQKVCHYRIPEPIRMADLHSRALLRGEDEFIYKEEAF 261          
BLAST of Gcaud2504.t1 vs. uniprot
Match: UPI001C530224 (endonuclease V n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C530224)

HSP 1 Score: 178 bits (452), Expect = 4.190e-51
Identity = 103/260 (39.62%), Postives = 150/260 (57.69%), Query Frame = 0
Query:    5 NETALPYEALIS---SWVAAQEQIAHKVDCSDNNNWG----DFFTPDGFKPKRELFVAGADVSFSTTE-DLAIGTLAVVKLFSDASHQLVFSKSYKVSMAQPYVPTFLGFREAPVISTLLKQLPEEVRTSI-DCLLVDGNGLLHPRKAGLACHVGVEHEIPCIGVSKTLLCVDGLDEKTIRERAAANGLLGIDVI---GESGFLWGKAIMTGNAQRKPIYVSIGHRVSLETAVRLVLTLCEYRVPAPVRYADLHSRAFIR 252
            NET+    +L S   SW+ AQE +  ++   DN  W     D    D  K ++  +V G D+SFS  +  +A G L VV L      ++++     V +  PY+P FL FREAPV+  LL+++ +         L+VDGNG+LHPR  GLACH+GV  ++P IG+ K L  VDGL +  +RE   AN     D+I   G S + WG A+ +     KPI++S GHRVS++TAV++V   C+YRVP P+R AD+ SR +++
Sbjct:   13 NETSTSEASLSSINNSWIEAQESLKRQLIVEDNFTWRLPSHDNGLKDNDKGEKLRYVGGVDLSFSKDDPSIACGALVVVDL---EILKVIYDDFSIVRLQIPYIPGFLAFREAPVLLELLEKMKQNAHLIYPQLLMVDGNGILHPRGFGLACHLGVMAKLPTIGIGKNLHHVDGLTQSGVRELLEANESCARDLIPLTGNSNYTWGVAMRSTEGSLKPIFISSGHRVSIDTAVKIVKMTCKYRVPEPIRQADIRSRDYLQ 269          
BLAST of Gcaud2504.t1 vs. uniprot
Match: W1PXB4_AMBTC (Uncharacterized protein n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1PXB4_AMBTC)

HSP 1 Score: 177 bits (448), Expect = 9.290e-51
Identity = 102/261 (39.08%), Postives = 143/261 (54.79%), Query Frame = 0
Query:   18 WVAAQEQIAHKVDCSDNNNWGDFFTPDGFKPKREL----FVAGADVSFSTTE-DLAIGTLAVVKLFSDASHQLVFSKSYKVSMAQPYVPTFLGFREAPVISTLLKQLPEEVRTSI-DCLLVDGNGLLHPRKAGLACHVGVEHEIPCIGVSKTLLCVDGLDEKTIRERAAANGLLGIDVI---GESGFLWGKAIMTGNAQRKPIYVSIGHRVSLETAVRLVLTLCEYRVPAPVRYADLHSRAFIRGECNDLFEAEQFSSLQP 269
            WV  Q  +  KV   DN  W    +    K   E     F+ G D+SF   +  +A G + +V +   AS ++V+       +  PYVP FL FRE PV+  LL+++    +      L+VDGNGLLHPR  GLA H+GV  ++P IGV K L  VDGL +  +++    N     DVI   G SGF WG A+ +     KPI++SIGHR+SLETA ++V   C+YR+P P+R AD+ SRA++      L  A + SS +P
Sbjct:   19 WVEVQNLLKRKVILEDNFMWSISASESSLKGTSESHRLRFIGGVDISFCKDDPSIACGAIVIVDI---ASMEVVYDDYNLTQLQIPYVPGFLAFREGPVLLELLEKMKLHTKLYYPQLLMVDGNGLLHPRGFGLASHLGVMADLPTIGVGKNLHHVDGLTQSGVKKLLEGNTKSDGDVITLTGNSGFTWGVAMRSSEDSIKPIFISIGHRISLETATKVVKMCCKYRIPEPIRQADIRSRAYLLRNARSLKIAYEASSSRP 276          
BLAST of Gcaud2504.t1 vs. uniprot
Match: A0A6P5M769_ARADU (endonuclease V isoform X1 n=15 Tax=Arachis TaxID=3817 RepID=A0A6P5M769_ARADU)

HSP 1 Score: 175 bits (444), Expect = 5.900e-50
Identity = 101/248 (40.73%), Postives = 149/248 (60.08%), Query Frame = 0
Query:   17 SWVAAQEQIAHKVDCSDNNNWGDFFTPDGFKPKRE---LFVAGADVSFSTTE-DLAIGTLAVVKLFSDASHQLVFSKSYKVSMAQPYVPTFLGFREAPVISTLLKQLPEEVRTSI-DCLLVDGNGLLHPRKA----GLACHVGVEHEIPCIGVSKTLLCVDGLDEKTIRE--RAAANGLLG-IDVIGESGFLWGKAIMTGNAQRKPIYVSIGHRVSLETAVRLVLTLCEYRVPAPVRYADLHSRAFIR 252
            +W+AAQ+ +  K+   D+  W     P+      E    ++ G D+SFS  +  +A GTL V+ L    + Q+V+     V++  PYVP FL FREAP++  +L+++ +   +     L+VDGNG+LHPR      GLACH+GVE  +P IG+ K L  VDGL++  +RE   A  N     I+++G SG +WG A+ +     KPI++SIGHR+SL+TA+RLV   C+YRVP P R AD+ SR +IR
Sbjct:   28 NWIAAQDLLREKLIREDSFTWK---IPEDRSDSEEGLLRYIGGVDISFSKDDPSMACGTLVVLDL---RTLQVVYEDFSLVNIRVPYVPGFLAFREAPILLEILEKMKKSGSSFYPQLLMVDGNGILHPRGKCFCFGLACHLGVEANLPTIGIGKNLHHVDGLNQSRVRELLEAGENSCKDFINLVGCSGHIWGAAMRSTQGSIKPIFISIGHRISLQTALRLVQMTCKYRVPEPTRQADIRSRDYIR 269          
BLAST of Gcaud2504.t1 vs. uniprot
Match: A0A1U8MHZ9_GOSHI (endonuclease V-like isoform X1 n=28 Tax=Gossypium TaxID=3633 RepID=A0A1U8MHZ9_GOSHI)

HSP 1 Score: 173 bits (439), Expect = 1.320e-49
Identity = 101/246 (41.06%), Postives = 145/246 (58.94%), Query Frame = 0
Query:   13 ALISSWVAAQEQIAHKVDCSDNNNWGDFFTPDGFKPKREL-FVAGADVSFSTTE-DLAIGTLAVVKLFSDASHQLVFSKSYKVSMAQPYVPTFLGFREAPVISTLLKQLPEEVRTSI-DCLLVDGNGLLHPRKAGLACHVGVEHEIPCIGVSKTLLCVDGLDEKTIRE--RAAANGLLGIDVI-GESGFLWGKAIMTGNAQRKPIYVSIGHRVSLETAVRLVLTLCEYRVPAPVRYADLHSRAFIR 252
            A +  W   Q+ +  +V   D+  W      +    +++L +V G DVSFS  E  +A G+L V+ L  D   +LV+ +   +S+  PY+P FL FREAP++  LL ++ ++        L+VDGNGLLHPR  GLA H+GV   IP IGV K L  VDGL +  +R+   A  N   GI  + G SGF+WG A+ +     KP++VS+GHRVSLETA+ +V   C++RVP P+R AD+ SR  +R
Sbjct:   17 AELGKWAEIQDTLKKRVITVDDFPWRLASQSESEPQQQQLKYVGGVDVSFSKEEPSMACGSLVVLDLLHDL--RLVYQEYTCLSLDIPYIPGFLAFREAPILLHLLAKMKKDASPFYPQVLMVDGNGLLHPRGFGLASHLGVIANIPTIGVGKNLHHVDGLTQSGVRKLLEAEENKAKGIITLRGNSGFIWGAAMRSEQGSLKPVFVSVGHRVSLETAIEIVNMTCKFRVPEPIRQADIRSREHLR 260          
BLAST of Gcaud2504.t1 vs. uniprot
Match: A0A1Y1I408_KLENI (Endonuclease V n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I408_KLENI)

HSP 1 Score: 174 bits (440), Expect = 1.460e-49
Identity = 108/258 (41.86%), Postives = 143/258 (55.43%), Query Frame = 0
Query:   18 WVAAQEQIAHKVDCSDNNNW---GDFFTPDGFKPKREL-FVAGADVSFSTTE-DLAIGTLAVVKL------------FSDASHQ-LVFSKSYKVSMAQPYVPTFLGFREAPVISTLLKQLPEEVRTSI--DCLLVDGNGLLHPRKAGLACHVGVEHEIPCIGVSKTLLCVDGLDEKTIRERAAANGLL---GIDVIGESGFLWGKAIMTGNAQRKPIYVSIGHRVSLETAVRLVLTLCEYRVPAPVRYADLHSRAFIR 252
            W   Q  +  ++   D + W   G    P    P  EL FV G DVSFS T+ DLA   L V+ L            FSD     +V+ +   V +  PY+P FLGFRE PV+  LL+++ +E R  I    +LVDGNG+LHPR  G ACH+GV   +  IGV K    +DGL    +R RA A GL     +D++GESG +WG A  T     KPI+VS+GH +SL+TAV++V   C +RVP PVR AD+ SR  +R
Sbjct:   14 WEEKQATLRSQLITHDVHTWTVPGGPVCPLQGPPGNELRFVGGVDVSFSQTDPDLACAALVVIDLTKLQEPVPGSAKFSDTGGDAVVYERCELVRLDVPYLPGFLGFREVPVLRPLLEEVAQE-RPDIAPQVILVDGNGILHPRGFGSACHLGVACHMATIGVGKNFFHLDGLTSDGVRARAEARGLQPGEAMDIVGESGRVWGAAYRTHAGSTKPIFVSVGHLLSLDTAVKIVRACCRFRVPEPVRQADMRSRERLR 270          
BLAST of Gcaud2504.t1 vs. uniprot
Match: A0A5N6R734_9ROSI (Uncharacterized protein n=2 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6R734_9ROSI)

HSP 1 Score: 173 bits (438), Expect = 1.810e-49
Identity = 97/242 (40.08%), Postives = 144/242 (59.50%), Query Frame = 0
Query:   18 WVAAQEQIAHKVDCSDNNNWGDFFTPDGFKPKREL-FVAGADVSFSTTE-DLAIGTLAVVKLFSDASHQLVFSKSYKVSMAQPYVPTFLGFREAPVISTLLKQLPEEVRTSI--DCLLVDGNGLLHPRKAGLACHVGVEHEIPCIGVSKTLLCVDGLDEKTIRERAAANGLLGID---VIGESGFLWGKAIMTGNAQRKPIYVSIGHRVSLETAVRLVLTLCEYRVPAPVRYADLHSRAFIR 252
            W+ AQ+ +  ++   D+  W    T    +    L +V G D+SFS  +  +A GTL V+      + Q+V+     V++  PYVP FL FREAP++  LL+++ +   +      L+VDGNG+LHPR  G+ACH+GV  ++P IG+ K L  VDGL    +R+   AN     D   +IG SG +WG A+ +     KPI+VS+GHRVSL+TA+R+V   C+YRVP P+R AD+ SR ++R
Sbjct:   18 WIEAQDMLKRRLVTEDDFTWKLPTTTSAEEEVEMLRYVGGVDMSFSKEDPSVACGTLVVL---DTQNLQVVYEDYSLVTLDVPYVPGFLAFREAPILLELLQRMKKSDASVFYPQLLMVDGNGILHPRGFGVACHLGVLADLPTIGIGKNLHHVDGLSYSGVRQLLEANENYSKDFITLIGCSGHVWGVAMRSTQGALKPIFVSVGHRVSLDTAIRIVKMTCKYRVPEPIRQADIRSREYLR 256          
BLAST of Gcaud2504.t1 vs. uniprot
Match: A0A1S3UF87_VIGRR (endonuclease V isoform X1 n=5 Tax=Phaseoleae TaxID=163735 RepID=A0A1S3UF87_VIGRR)

HSP 1 Score: 173 bits (438), Expect = 2.030e-49
Identity = 97/243 (39.92%), Postives = 144/243 (59.26%), Query Frame = 0
Query:   17 SWVAAQEQIAHKVDCSDNNNWGDFFTPD-GFKPKREL-FVAGADVSFSTTE-DLAIGTLAVVKLFSDASHQLVFSKSYKVSMAQPYVPTFLGFREAPVISTLLKQLPEEVRTSI-DCLLVDGNGLLHPRKAGLACHVGVEHEIPCIGVSKTLLCVDGLDEKTIRERAAANGLLG---IDVIGESGFLWGKAIMTGNAQRKPIYVSIGHRVSLETAVRLVLTLCEYRVPAPVRYADLHSRAFIR 252
            +W+  Q+ +  K+   D+ +W      + G+K   EL +V G D+SFS  +   A GTL V+   +    Q+++     V++  PYVP FL FREAPV+  LL+++           L+VDGNG+LHPR  GLACH+GVE  +P IG+ K L  VDGL   T+R+   A        I+++G SG +WG A+ +     KPI++SIGH +SL+TA+ +V   C++RVP P+R AD+ SR +IR
Sbjct:   20 TWITTQDILREKLITDDSFSWKLSSEGEPGYKKGEELRYVGGVDISFSKDDPSKACGTLVVLDFHT---LQVLYQDFSFVTLQVPYVPGFLAFREAPVLQQLLEKMKRSDNPFYPQLLMVDGNGILHPRGFGLACHIGVEANLPTIGIGKNLHHVDGLTHSTVRKLLGAEENSSKEYINLVGCSGRIWGVAMRSTQGSIKPIFISIGHMISLQTAIMIVQKTCKFRVPEPIRQADIRSRDYIR 259          
BLAST of Gcaud2504.t1 vs. uniprot
Match: UPI0010A52387 (endonuclease V n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A52387)

HSP 1 Score: 172 bits (436), Expect = 4.270e-49
Identity = 101/245 (41.22%), Postives = 143/245 (58.37%), Query Frame = 0
Query:   17 SWVAAQEQIAHKVDCSDNNNWGDFFTPDGFKPKREL----FVAGADVSFSTTE-DLAIGTLAVVKLFSDASHQLVFSKSYKVSMAQPYVPTFLGFREAPVISTLLKQLPEEVRTSI-DCLLVDGNGLLHPRKAGLACHVGVEHEIPCIGVSKTLLCVDGLDEKTIRERAAANGLLGID---VIGESGFLWGKAIMTGNAQRKPIYVSIGHRVSLETAVRLVLTLCEYRVPAPVRYADLHSRAFIR 252
            +W+AAQ+ +  K+   D   W    TP G   +  L    +V G D+SFS  E  +A GTL V+      + Q+V+     V++  PYVP FL FREAPV+  LL+++           LLVDGNG+LHPR  GLACH+GV  ++P IG+ K L  VDGL++  +R+   A      D   ++G SG +WG A+ +     KPI++SIGHR+SL TA+ +    C+YRVP P+R AD+ SR +IR
Sbjct:   21 NWIAAQDFLRTKLITDDCFTW-KLNTPAGPSEQGALEVLRYVGGVDISFSKDEPSMACGTLVVLDF---PNLQVVYEDFSLVAVHVPYVPGFLAFREAPVLLELLEKMKRCNNPFYPQLLLVDGNGILHPRGFGLACHLGVVADLPTIGIGKNLHHVDGLNQSRVRQLLEAEENHAKDFITLVGGSGQIWGAAMRSTQGSIKPIFISIGHRISLRTAITIAQMTCKYRVPEPIRQADIRSRDYIR 261          
The following BLAST results are available for this feature:
BLAST of Gcaud2504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIS7_9FLOR1.180e-12266.53Endonuclease V n=1 Tax=Gracilariopsis chorda TaxID... [more]
R7QG07_CHOCR4.070e-10060.32Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI001C5302244.190e-5139.62endonuclease V n=1 Tax=Macadamia integrifolia TaxI... [more]
W1PXB4_AMBTC9.290e-5139.08Uncharacterized protein n=3 Tax=Amborella trichopo... [more]
A0A6P5M769_ARADU5.900e-5040.73endonuclease V isoform X1 n=15 Tax=Arachis TaxID=3... [more]
A0A1U8MHZ9_GOSHI1.320e-4941.06endonuclease V-like isoform X1 n=28 Tax=Gossypium ... [more]
A0A1Y1I408_KLENI1.460e-4941.86Endonuclease V n=1 Tax=Klebsormidium nitens TaxID=... [more]
A0A5N6R734_9ROSI1.810e-4940.08Uncharacterized protein n=2 Tax=Carpinus fangiana ... [more]
A0A1S3UF87_VIGRR2.030e-4939.92endonuclease V isoform X1 n=5 Tax=Phaseoleae TaxID... [more]
UPI0010A523874.270e-4941.22endonuclease V n=1 Tax=Prosopis alba TaxID=207710 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2170.10archaeoglobus fulgidus dsm 4304 superfamilycoord: 4..253
e-value: 1.3E-72
score: 246.2
NoneNo IPR availablePANTHERPTHR28511:SF1ENDONUCLEASE Vcoord: 13..254
IPR007581Endonuclease VPFAMPF04493Endonuclease_5coord: 52..245
e-value: 4.7E-50
score: 170.0
IPR007581Endonuclease VPANTHERPTHR28511ENDONUCLEASE Vcoord: 13..254
IPR007581Endonuclease VCDDcd06559Endonuclease_Vcoord: 15..249
e-value: 1.22724E-69
score: 211.975

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_441_length_25217_cov_4.561570contigNODE_441_length_25217_cov_4.561570:4670..5488 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2504.t1Gcaud2504.t1Gracilaria caudata M_176_S67 malemRNANODE_441_length_25217_cov_4.561570 4670..5488 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2504.t1 ID=Gcaud2504.t1|Name=Gcaud2504.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=273bp
MSSSNETALPYEALISSWVAAQEQIAHKVDCSDNNNWGDFFTPDGFKPKR
ELFVAGADVSFSTTEDLAIGTLAVVKLFSDASHQLVFSKSYKVSMAQPYV
PTFLGFREAPVISTLLKQLPEEVRTSIDCLLVDGNGLLHPRKAGLACHVG
VEHEIPCIGVSKTLLCVDGLDEKTIRERAAANGLLGIDVIGESGFLWGKA
IMTGNAQRKPIYVSIGHRVSLETAVRLVLTLCEYRVPAPVRYADLHSRAF
IRGECNDLFEAEQFSSLQPEDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007581Endonuclease-V