Gcaud2496.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2496.t1
Unique NameGcaud2496.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length231
Homology
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BLAST of Gcaud2496.t1 vs. uniprot
Match: A0A2V3ILU0_9FLOR (Malectin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILU0_9FLOR)

HSP 1 Score: 229 bits (585), Expect = 4.430e-72
Identity = 113/227 (49.78%), Postives = 148/227 (65.20%), Query Frame = 0 
Query:    4 MPSAEPTLLVIEQPTLPEETPVEVVEQSLTSADMPEADAEPMPSVEAAXXXXXXXXXXDSTAPVPFFSYNVGGDAFGQVQADPVQHVVGETLIFNMPDALISDANPALEDAYKSHRYGMLGSVWGYDLPVAQPGYYTCKLHYCETFSEFFTDEPNRTFEVTLVGDGEPDRVHRAEFDVMVELGGREFTAYDRTFSDIAVAEMLQLREIPSKGDAFLSGITCLWTAPL 230
            MPS E  ++ IE    P  TP E+ E S +S  +P                              +F YN+GG +F +V+ADP +++VGETL F MP+A+I+ A   + D YKSHRYGMLGS+WGYD+PV  PGYY C +HYCET+SE F  E  R FEVT++GD  P+  HR EFDVM ELG +EFTAY+RTF +IA++E+L +RE P+ GDAFLSGI+C++TAPL
Sbjct:   79 MPSTEEVVMNIEPLDEPMSTPEEIEEVSNSSETIPH-----------------------------YFVYNIGGKSFDEVKADPTEYLVGETLAFEMPEAIIAGAKDVIADLYKSHRYGMLGSIWGYDIPVQYPGYYACSMHYCETYSENFVAESRRKFEVTIIGDASPETEHREEFDVMEELGYQEFTAYNRTFENIAISEILSIREKPTTGDAFLSGISCIYTAPL 276
The following BLAST results are available for this feature:
BLAST of Gcaud2496.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILU0_9FLOR4.430e-7249.78Malectin domain-containing protein n=1 Tax=Gracila... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021720Malectin domainPFAMPF11721Malectincoord: 110..202
e-value: 5.9E-7
score: 29.7
NoneNo IPR availableGENE3D2.60.120.430coord: 69..225
e-value: 6.0E-12
score: 47.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1317_length_11484_cov_3.708769contigNODE_1317_length_11484_cov_3.708769:1257..1949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2496.t1Gcaud2496.t1Gracilaria caudata M_176_S67 malemRNANODE_1317_length_11484_cov_3.708769 1257..1949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2496.t1 ID=Gcaud2496.t1|Name=Gcaud2496.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=231bp
MEEMPSAEPTLLVIEQPTLPEETPVEVVEQSLTSADMPEADAEPMPSVEA
AAPPPAAAAAADSTAPVPFFSYNVGGDAFGQVQADPVQHVVGETLIFNMP
DALISDANPALEDAYKSHRYGMLGSVWGYDLPVAQPGYYTCKLHYCETFS
EFFTDEPNRTFEVTLVGDGEPDRVHRAEFDVMVELGGREFTAYDRTFSDI
AVAEMLQLREIPSKGDAFLSGITCLWTAPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021720Malectin_dom