Gcaud2461.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2461.t1
Unique NameGcaud2461.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length685
Homology
BLAST of Gcaud2461.t1 vs. uniprot
Match: A0A2V3IXM5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXM5_9FLOR)

HSP 1 Score: 163 bits (412), Expect = 9.620e-39
Identity = 163/682 (23.90%), Postives = 298/682 (43.70%), Query Frame = 0
Query:   15 LTPHLLQVHRGGYVEVNMRASVVDSERLCFDVPRKQIEDALCSMVVYDTRGSTPNVFVHSPVTVKVAKEG--SEQAWTKVLTRYQGTKVGIETAQAKSEGTLVGFRQEHYYSQENFDAGVLNHSKFFVITRSSSKVSFHPLESIKALNFQDDAICEALSEDSFMKQYVVDRKNCYTIEVVAQGKGKGDVEVRYSIWSPYSPAYEVSYILAVDEDEDIFAFGVRPDRNLKCYFTFHNPLQCHLSDVRIVFCSGQIRF---NRSYWSYANKPQDEKAQGNDSVSEKTEGNDNEESDKEEDEENFVDEF---SDVSSDRLSVMMNFKDQGNVMHELPEKVSLKMNESARLLMFEKSCVSGIVRTIETDTSDPFGGVYILLHNTTNEKLEGGHLQVKSTCAVLSQLHVIIPLAPNDFVLRKLARYADFEWKRYKQVDIGDARSFHVSENHLSVFSEKTKTMMGRIQNKGNTEVEILVAH--------ELRSGANWKEAVECFLTRGSWVHASQGERIEPYSYSYGFRGMT-YLLKLAPHETCWVTVREKLTAKHKQVNLEDLESKTVAYLEIAQLLPSTALQLLRQLLSLRRESERLKHERWLHQEKLKEIEAYRIGSREKTDGQGGEKDQKEEEGRKSAEDKLQEYHERSSRASKARAVLEDLMDDIERRLFEVNSEMASMRRQL 679
            + P  L + R G+++V  +A+VVDSE+L F VP+KQ++  + S+ V+D+RG+ P +   S            SE AW  ++T  QG  V +      +EG L+G R            G  +  K  V+    +KVS H ++++ +++F++      L + +  K + +D K  Y+I +V  G G G+V V Y+     +P +  SY+++  +     ++G+  +  +KC+ T  NPL C + DV +   S   +     + Y        + +A  +D+ S K E   +EE      E + +D        ++ + S+   +     V+     K+SLK    AR+ +FE+ C SG++          F  +Y+   NTT+  LE G+    S     +    +  L   + +L  L RY            +    S    +  L       +T    + N  + ++++ V H        E+ S A W   ++   T G      +   I+P       R +T Y + +A  E C + V E +    +   L ++  K +A LE   ++    +  L  +L + RE E L   R  H+++LK +  ++    E+ + + GE   K +EG    E  L  Y    +R+      +++++DDI+ RL  +  E+   ++ L
Sbjct:   16 ILPKSLIISRDGFLQVTRKAAVVDSEKLYFTVPKKQMQRVVDSLQVFDSRGNIPCITFPSSFFSSADNFNLRSENAWEDLVTEQQGAFVQVSMGDDCTEGHLIGLRHH----------GAGDAEKTSVLLLRDAKVSAHNIDNVTSISFRESRASAELKKFTTSKGFDLDTKGNYSITIVTSGSGPGEVSVSYTQIVSGAP-FGTSYVISPADGAP--SYGIHRNMRIKCFVTIRNPLSCDIEDVEVTIQSQMFQNFPKTKMYSKEQGSGDEGQAMDSDASSAKNEPERDEEDGSGSSELSDIDNLFKNGSTTTSQASIEAYYNSHRAVL--ATTKLSLKEGGCARIALFEEHCESGLIHYYRAGIDQCFLDLYV--RNTTSRHLEPGYGLFSSPDIESTHSFTLKFLMKGERILNTLRRYTGCRGSATSTSSMERVISCSKVDEKLLATVMFRRTAQYVLHNLEDQDIDVFVFHDTAQSSRTEVESEALWYHNLK---TVGGGEQKGKATVIQPRPSD--MRSLTDYHVHVASKERCRLVVTEYVKKDVEVPLLYNVSMKLIANLEKNDMIGKKLVDGLLDVLRIEREIEFLTRRRGSHRKRLKALINHQRNEAERHEEKPGENVPKLDEGL-DYEGVLSTYMRVVARSETEIKKIQEVLDDIDYRLISLQHELKLKKKTL 674          
The following BLAST results are available for this feature:
BLAST of Gcaud2461.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IXM5_9FLOR9.620e-3923.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 630..678
NoneNo IPR availableCOILSCoilCoilcoord: 573..593
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 607..651
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_947_length_15859_cov_4.413686contigNODE_947_length_15859_cov_4.413686:2654..4708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2461.t1Gcaud2461.t1Gracilaria caudata M_176_S67 malemRNANODE_947_length_15859_cov_4.413686 2654..4708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2461.t1 ID=Gcaud2461.t1|Name=Gcaud2461.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=685bp
MNQKLDQSVTKTTVLTPHLLQVHRGGYVEVNMRASVVDSERLCFDVPRKQ
IEDALCSMVVYDTRGSTPNVFVHSPVTVKVAKEGSEQAWTKVLTRYQGTK
VGIETAQAKSEGTLVGFRQEHYYSQENFDAGVLNHSKFFVITRSSSKVSF
HPLESIKALNFQDDAICEALSEDSFMKQYVVDRKNCYTIEVVAQGKGKGD
VEVRYSIWSPYSPAYEVSYILAVDEDEDIFAFGVRPDRNLKCYFTFHNPL
QCHLSDVRIVFCSGQIRFNRSYWSYANKPQDEKAQGNDSVSEKTEGNDNE
ESDKEEDEENFVDEFSDVSSDRLSVMMNFKDQGNVMHELPEKVSLKMNES
ARLLMFEKSCVSGIVRTIETDTSDPFGGVYILLHNTTNEKLEGGHLQVKS
TCAVLSQLHVIIPLAPNDFVLRKLARYADFEWKRYKQVDIGDARSFHVSE
NHLSVFSEKTKTMMGRIQNKGNTEVEILVAHELRSGANWKEAVECFLTRG
SWVHASQGERIEPYSYSYGFRGMTYLLKLAPHETCWVTVREKLTAKHKQV
NLEDLESKTVAYLEIAQLLPSTALQLLRQLLSLRRESERLKHERWLHQEK
LKEIEAYRIGSREKTDGQGGEKDQKEEEGRKSAEDKLQEYHERSSRASKA
RAVLEDLMDDIERRLFEVNSEMASMRRQLGNLTA*
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