Gcaud2442.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2442.t1
Unique NameGcaud2442.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length213
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2442.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 142..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 181..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..95
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 158..180
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
NoneNo IPR availableTMHMMTMhelixcoord: 94..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_42_length_67898_cov_4.520993contigNODE_42_length_67898_cov_4.520993:40608..41246 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2442.t1Gcaud2442.t1Gracilaria caudata M_176_S67 malemRNANODE_42_length_67898_cov_4.520993 40608..41246 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2442.t1 ID=Gcaud2442.t1|Name=Gcaud2442.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=213bp
MFLNLPCIRRVYGDRSTLPLTSSSRRAKRRLFALSTGFLAFVVATCVAYV
IHVNHVSTILVETVSGLLGGLRRAVTAIDWKASAAFKVTDAMRMSIAMSM
ALGVLLGVGVGLISGLEPAVVIGVSASMAMGCVFVMSFAILHGVNALRAI
AFALFVSVCLPFGFGLGFGSGILVGIFLGLEDADEVREKTVDFVSNFGDF
IRVVTAFTLEIL*
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