Gcaud2372.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2372.t1 vs. uniprot
Match: A0A2V3IMD5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD5_9FLOR) HSP 1 Score: 171 bits (432), Expect = 1.280e-42 Identity = 119/361 (32.96%), Postives = 184/361 (50.97%), Query Frame = 0
Query: 384 SGNCKVDIGLGGFFEIPSRYGKVHFLPPFAYDKHRMYIRVEDASDSSGIDLFFIQGFDRHIWFCIIGTLVLFTFLKFFDRHFE----YDHLS-----QDGLSF---KDEGFRLLKAVQST---------------GKFG-------AFSCSGAFFLSATKCS--ATLLQEEPSSRFQSLEDIKKCKISPSEVCFLSGISFEDLWISTFEAGNEGNGSCGDKKATRVKTYDELFDKILNGECKFGVALESAAEVAIRERYCGRLVAQGDEIFSSGLSMVLPLRSSYADVDVNRIMSEGTLELLMEKRKSHMDVYFDSLAACETSRTS-LKFAKLRGFFIITVSVLGVGALVLLLGNVWRMRR 707
S +C DIG+GG+F+ RYGKV FLPPF +D++R+ V + +D+SG FF++ FD W I+ +FT LK D F Y LS + L F +RL KA QS+ GK F + + + S A+L+QE+ +S ++S ED + CKI PS+VC L G + E W + N NG+ + TY+E++D + +G+CKF + LES IR + CG+LV + +++SGLSMV+P S+ + MS+ T+ LL+ + S ++ + C S L F KL+ FFI+ SV V+LLG+++ +++
Sbjct: 72 SNSCPCDIGIGGWFQNQFRYGKVDFLPPFVHDRYRVATHVSN-TDASGEMPFFLKTFDSLSWITIVALTCIFTLLKLLDSRFAVAEPYTPLSGVSRIRRCLHFLWKHPRLYRLRKAGQSSVTRLMLQPDNEVVDNGKSTRQWFLNLVIGICALFLVLSFEASMTASLVQEKITSTYESPEDFRSCKIPPSDVCALRGGALEMFWNTNIATSNCHNGN----PIQYLSTYEEIYDGLASGKCKFSICLESVITTQIRTQSCGQLVLLEEPLYTSGLSMVVPKGSNLTEA-----MSKATMTLLLSQPSSFLESFLRKWPKCTKKVASTLTFRKLKLFFILAFSVCAAILFVMLLGSLYPVKK 422
BLAST of Gcaud2372.t1 vs. uniprot
Match: A0A2V3IUK7_9FLOR (Glutamate receptor ionotropic, NMDA 2C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUK7_9FLOR) HSP 1 Score: 128 bits (321), Expect = 1.030e-27 Identity = 94/322 (29.19%), Postives = 158/322 (49.07%), Query Frame = 0
Query: 31 KVDFLPGFTLDQYRVYTSIENTSFSSSADGDFFLGAFGGWVWLTILGIMVIVIFLKTFDNSYAPFEPREMRNPYEKSW----NFRRDDKDPSYLNLHRFKRSVQSTISNMLIQPEEEIQSDNEQKKGRNSFFRAYLNIIFAVFALFIILVYEASVTSSILKDKLTSDYQSVENFRSCDIKPNDVCFVKNEAFEYIWVTYIKPRHVDPKCFSIDAPGSRQILLNETRVDTYEELFDRIANGSCLYGVALETGGPTMMRELG--YCRKIVAQGDPIFEYDVAMALSISSNYTSTLSEATLQLKAKRVQPIKTSFFQENELCPPL 346
+VD LP F D RV + NT S S FF+ F WL + I+++ K D +AP + N SW +F R N +R S++ST +++Q + +I + + G ++F LN+I +F L ++L YEAS+T++++++ + SDYQSVE+ ++C IKP DVC A W I C ++ G ++EE D + NG+C +G+ L++ T+ + YC ++++ G+PI+ ++M L +SN T + ATL+L+ + P +FQ C P+
Sbjct: 131 RVDLLPPFVYDGIRVTFHVSNTRRSGSKL--FFVTTFDLRSWLCLFAIIILFALAKFLDERFAPIPSADEPNA-ANSWGRCLHFLRT-------NWNRLITSIRSTTLRIVLQSDHDIV---QNQHGAHNF---NLNLIIGIFGLLVVLSYEASMTATLVQETVVSDYQSVEDLKTCRIKPEDVCVPGGSAVLTFWNDAI----AYGDCHR-ESKGKNYFR------GSFEETLDAVKNGTCKFGLVLDS---TIQEAIHGKYCGQLLSSGEPIYTGGLSMILPKNSNLTKAMRLATLKLRNEASAPSLQQYFQTMSKCAPI 422
BLAST of Gcaud2372.t1 vs. uniprot
Match: R7Q540_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q540_CHOCR) HSP 1 Score: 69.7 bits (169), Expect = 8.140e-10 Identity = 42/166 (25.30%), Postives = 78/166 (46.99%), Query Frame = 0
Query: 182 TSSILKDKLTSDYQSVENFRSCDIKPNDVCFVKNEAFEYIWVTYIKPR--HVD-PKCFSIDAPGSRQILLNETRVDTYEELFDRIANGSCLYGVALETGGPTMMRELGYCRKIVAQGDPIFEYDVAMALSISSNYTSTLSEATLQLKAKRVQPIKTSFFQENELCP 344
++++++D L+S Y+ +++ ++C+++P+DVC K A + W+ I H + P FS Y++ D + CLY + L + G + + YC +++ G+P ++ L SN TS LSE T+ L V P + + CP
Sbjct: 10 SAALVQDTLSSRYRGLQDLKTCNVRPSDVCVPKGGAIDLFWINTIGKNACHKEKPVYFS-----------------RYKDGIDNLLTKKCLYMLTLSSSGNELTQR-EYCGRLLVTGEPALRTGLSFVLPRGSNMTSHLSEKTVFLTDAGVLPTPERYLRATGKCP 157 The following BLAST results are available for this feature:
BLAST of Gcaud2372.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2372.t1 ID=Gcaud2372.t1|Name=Gcaud2372.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=732bpback to top |