Gcaud237.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud237.t1
Unique NameGcaud237.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length290
Homology
BLAST of Gcaud237.t1 vs. uniprot
Match: A0A2V3ITU0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITU0_9FLOR)

HSP 1 Score: 164 bits (414), Expect = 1.700e-46
Identity = 88/143 (61.54%), Postives = 104/143 (72.73%), Query Frame = 0
Query:   28 SKLKRFRFSQTFDFFLLRAIREADAHIPKWGHTDELFNRVLSTFLKLVPEKVFWYMNKLSKKTLIDHFKRLVPARKDQNQHNEKASGIIKEYGEKETLLDDLISEIDEKAEAARIKKEELTAHEQSLIEAGEMIRETALKRKS 170
            +KLKRFR  +TFD FLLRA+R+ DAHIPKWG  +  + RVL TFLK VP  VF YMN+ S KTLID FKRLV  R+  N  +  +SGI + YGEKE+LLDDLI E+D++AEA R+ KEE    EQ LI AGE IRE ALKR S
Sbjct:   45 TKLKRFRVPETFDLFLLRAVRKKDAHIPKWGELESFYERVLETFLKRVPSTVFIYMNRPSTKTLIDRFKRLVSMRRADNTRSMASSGIAETYGEKESLLDDLILEMDDRAEATRLIKEEQNMKEQRLIRAGESIRERALKRSS 187          
BLAST of Gcaud237.t1 vs. uniprot
Match: A0A2V3ICE3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICE3_9FLOR)

HSP 1 Score: 145 bits (366), Expect = 1.440e-39
Identity = 78/130 (60.00%), Postives = 93/130 (71.54%), Query Frame = 0
Query:   28 SKLKRFRFSQTFDFFLLRAIREADAHIPKWGHTDELFNRVLSTFLKLVPEKVFWYMNKLSKKTLIDHFKRLVPARKDQNQHNEKASGIIKEYGEKETLLDDLISEIDEKAEAARIKKEELTAHEQSLIEA 157
            +KLKRFRF++TFD FLLRA+R+ D HIPKWG  + +   VL TFLK VP  VF YMN  S KTLID FKRLV  RK  N  +  +SGI K Y EKE+LLDDLI E+DE+AEA R+ KEE   +E+ LI A
Sbjct:   45 TKLKRFRFTETFDLFLLRAVRKEDPHIPKWGELESVSEIVLETFLKRVPSTVFIYMNHPSTKTLIDRFKRLVSMRKADNTRSMASSGIAKTYLEKESLLDDLILEMDERAEATRLMKEEQNMNEKRLIRA 174          
BLAST of Gcaud237.t1 vs. uniprot
Match: A0A2V3J3D3_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3D3_9FLOR)

HSP 1 Score: 84.0 bits (206), Expect = 6.510e-15
Identity = 51/118 (43.22%), Postives = 64/118 (54.24%), Query Frame = 0
Query:   29 KLKRFRFSQTFDFFLLRAIREADAHIPKWGHTDELFNRVLSTFLKLVPEKVFWYMNKLSKKTLIDHFKRLVPARKDQNQHNEKASGIIKEYGEKETLLDDLISEIDEKAEAARIKKEE 146
            K KR RFS  +D FLL+AI   DAH    G     F   L  FL  VP+     +   S KTL D FK+++   +     N  ASGII+  GE+ETLLDDLI +IDE  E  R + +E
Sbjct:   73 KKKRIRFSAAWDLFLLKAISAVDAHTAPHGEMQPRFEEALQIFLAAVPDSWLATVTAPSWKTLNDRFKKIISEHRKAVNCNAVASGIIEVRGERETLLDDLILDIDEFEERRRTEHDE 190          
BLAST of Gcaud237.t1 vs. uniprot
Match: A0A2V3IKT4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKT4_9FLOR)

HSP 1 Score: 81.3 bits (199), Expect = 1.250e-14
Identity = 56/123 (45.53%), Postives = 83/123 (67.48%), Query Frame = 0
Query:  112 ASGIIKEYGEKETLLDDLISEIDEKAEAARIKKEELTAHEQSLIEAGEMIRETALKRKSSATRKTEETDTASQ--PGSKRSCRHEATKSDDAITALILEQSKEQKMREEEKVKIEQRRLEIEQ 232
            +SGI + YGEK++LLDDLI E+DE+AEA R+ KEE   +EQ LI  GE IRE ALKR SS T + + T +     P  KR  + + +  DDAI+  + +Q++EQ+  + ++VKIE+ + E++Q
Sbjct:    3 SSGIAETYGEKQSLLDDLILEMDERAEATRVLKEEQNMNEQRLIRVGESIRERALKR-SSITDRIDSTRSQESMVPAKKRMRKSKPSTPDDAISTFLSKQAQEQQRLDADRVKIERDKFELQQ 124          
BLAST of Gcaud237.t1 vs. uniprot
Match: A0A2V3IQX2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQX2_9FLOR)

HSP 1 Score: 80.5 bits (197), Expect = 4.930e-14
Identity = 80/271 (29.52%), Postives = 128/271 (47.23%), Query Frame = 0
Query:   34 RFSQTFDFFLLRAIREADAHIPKWGHTDELFNRVLSTFLKLVPEKVFWYMNKLSKKTLIDHFKRLVPARKDQNQHNEKASGIIKEYGEKETLLDDLISEIDEKAEAARIKKEELTAHEQSLIEAGEMIRETALKRKSSATRKTEETDTASQPGSKRSCRHEATKSDDAITALILEQSKE--------QKMREEEKVKIEQRRLEIEQDRV------QKEIAGYETLQLQ-SERRISLXXXXXXXEKVEREQAIQERKHLLNIMAAFSKKLQ 289
            RFS   D  LL+++   DAH+P        F   +  F+   P K F      + KTL D FK+++       + N  ASGII+  GE++TL DD++ E+DE  E  R ++ E T  E+ L+ A   IR  AL R    T+++E   T  +  S RS      K    +T    E+ ++         K  + + + +EQ RL  ++++V      QK +   E+ +L   ERR+ L       ++ +R     ER+ ++ +  AF KKLQ
Sbjct:    2 RFSAALDLVLLKSVTAFDAHVPPDRGIQSRFEEAMDIFISSAPTKAFDNACAPTWKTLSDLFKKILCEHHTAVKSNAVASGIIEVRGERKTLPDDVMLEVDEWDEKRRSERTERTDLEKRLLLASNEIRTKALSR----TKQSEHVATTDEGCSVRSVERTKRKKRGPVTVDSDEEERDLVEIHVAATKDMDTKPLMLEQDRLHFDRNKVAWEVDRQKRLDECESRRLSLDERRVDLETERTAADRDDRSDIRAERRQMVAVFVAFVKKLQ 268          
BLAST of Gcaud237.t1 vs. uniprot
Match: A0A2V3ICS1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICS1_9FLOR)

HSP 1 Score: 72.4 bits (176), Expect = 1.710e-12
Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 0
Query:   34 RFSQTFDFFLLRAIREADAHIPKWGHTDELFNRVLSTFLKLVPEKVFWYMNKLSKKTLIDHFKRLVPARKDQNQHNEKASGIIKEYGEKETLLDDLISEIDE 135
            RFS   D  LL+ +   DAH+   G     F   +  F+   P + F  +  ++ KTLID FK+++   +     N  +SGII+  GE+ETLLDD+I E+DE
Sbjct:    2 RFSSASDLLLLKPVTALDAHVAPHGRIQFRFEEAMDIFISSAPARAFNTVFTMTWKTLIDQFKKILCEHRAATNKNAVSSGIIEVQGERETLLDDVILEVDE 103          
BLAST of Gcaud237.t1 vs. uniprot
Match: A0A2V3J584_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J584_9FLOR)

HSP 1 Score: 58.9 bits (141), Expect = 6.210e-7
Identity = 46/150 (30.67%), Postives = 73/150 (48.67%), Query Frame = 0
Query:   19 SEPSMSPPLS------KLKRFRFSQTFDFFLLRAIREADAHIPKWGHTDELFNRVLSTFLKLVPEKVFWYMNKLSKKTLIDHFKRLVPARKDQNQHNEKASGIIKEYGEKETLLDDLISEIDEKAEAARIKKEELTAHEQSLIEAGEMIR 162
            S+PS +P ++      + KR  FS      L++AI+  DAHI             L+ F           +   + KTL D  K+++ + +    +N  ASGII+E+GE  TLLDD++  IDE  +    +++E +  E+ L  A E IR
Sbjct:   31 SDPSAAPAVTFAPGSGRKKRIHFSAGCYVLLVKAIKALDAHIAPHDEAQARLEEALALFFSPTSSGGLAVVCTPTWKTLSDRLKKVISSHRLAVGNNAVASGIIEEWGETGTLLDDIMLAIDEVDDRCCTERDERSELEKRLWAAREDIR 180          
The following BLAST results are available for this feature:
BLAST of Gcaud237.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3ITU0_9FLOR1.700e-4661.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICE3_9FLOR1.440e-3960.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J3D3_9FLOR6.510e-1543.22Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IKT4_9FLOR1.250e-1445.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQX2_9FLOR4.930e-1429.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICS1_9FLOR1.710e-1237.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J584_9FLOR6.210e-730.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..150
NoneNo IPR availableCOILSCoilCoilcoord: 255..275
NoneNo IPR availableCOILSCoilCoilcoord: 207..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_527_length_22935_cov_4.449440contigNODE_527_length_22935_cov_4.449440:2326..3195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud237.t1Gcaud237.t1Gracilaria caudata M_176_S67 malemRNANODE_527_length_22935_cov_4.449440 2326..3195 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud237.t1 ID=Gcaud237.t1|Name=Gcaud237.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=290bp
MEQHSSSVERPFAMAPHNSEPSMSPPLSKLKRFRFSQTFDFFLLRAIREA
DAHIPKWGHTDELFNRVLSTFLKLVPEKVFWYMNKLSKKTLIDHFKRLVP
ARKDQNQHNEKASGIIKEYGEKETLLDDLISEIDEKAEAARIKKEELTAH
EQSLIEAGEMIRETALKRKSSATRKTEETDTASQPGSKRSCRHEATKSDD
AITALILEQSKEQKMREEEKVKIEQRRLEIEQDRVQKEIAGYETLQLQSE
RRISLEEKRFELEKVEREQAIQERKHLLNIMAAFSKKLQ*
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