Gcaud2365.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2365.t1 vs. uniprot
Match: A0A2V3IUK7_9FLOR (Glutamate receptor ionotropic, NMDA 2C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUK7_9FLOR) HSP 1 Score: 167 bits (424), Expect = 1.680e-44 Identity = 110/327 (33.64%), Postives = 160/327 (48.93%), Query Frame = 0
Query: 2 CDIGVGGWFQTPSRFHQVDFLPPFTTDSYRVFADFSNTVIDLQPHFFLTSFSTNAWILIAVQIVTFAVLRLMDSRFAPAPSYHPLPNTQPFFIRFWYGLINHPLSYRIRRSIRITLSRMILSPDVDDIRN---AAQWFIDLLQALCSLFLLMVYSASGTFEL-----------------------------------FWRKVIAANERDCHRNDSPT--FLRTYEEVFSHVSQKKCLYGLHLESTAKDAIHNRYCGRFTLIGDELYTGGLSMILPKHSPMTKHMTEATLALQDIADSPRMTKYFMNRRNCEANLATTVGAKKLELFF 288
C+IG+GGWF + R +VD LPPF D RV SNT FF+T+F +W+ + I+ FA+ + +D RFAP PS PN + R + L + R+ SIR T R++L D D ++N A + ++L+ + L +++ Y AS T L FW IA DCHR F ++EE V C +GL L+ST ++AIH +YCG+ G+ +YTGGLSMILPK+S +TK M ATL L++ A +P + +YF C + + +KL+L F
Sbjct: 115 CEIGIGGWFNSADRDERVDLLPPFVYDGIRVTFHVSNTRRSGSKLFFVTTFDLRSWLCLFAIIILFALAKFLDERFAPIPSADE-PNAANSWGRCLHFLRTN--WNRLITSIRSTTLRIVLQSDHDIVQNQHGAHNFNLNLIIGIFGLLVVLSYEASMTATLVQETVVSDYQSVEDLKTCRIKPEDVCVPGGSAVLTFWNDAIAYG--DCHRESKGKNYFRGSFEETLDAVKNGTCKFGLVLDSTIQEAIHGKYCGQLLSSGEPIYTGGLSMILPKNSNLTKAMRLATLKLRNEASAPSLQQYFQTMSKCAPITGSVLTFEKLQLLF 436
BLAST of Gcaud2365.t1 vs. uniprot
Match: R7QE12_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE12_CHOCR) HSP 1 Score: 123 bits (308), Expect = 8.170e-31 Identity = 64/158 (40.51%), Postives = 90/158 (56.96%), Query Frame = 0
Query: 4 IGVGGWFQTPSRFHQVDFLPPFTTDSYRVFADFSNTVIDLQPHFFLTSFSTNAWILIAVQIVTFAVLRLMDSRFAPAP-SYHPLPNTQPFFIRFWYGLINHPLSYRIRRSIRITLSRMILSPDVDDIR---NAAQWFIDLLQALCSLFLLMVYSASGT 157
+ VGGWF+ P RF +VDFLPPF D + NT FF+T+FST W I + F L+++D RF P SY PLP T R + L+ + YR+R++++ TLSRM+ D I ++ QW ++LL ALCSLFL++ Y A+ T
Sbjct: 1 MAVGGWFRNPERFRRVDFLPPFAIDGLSIVVHTDNTSSASAGAFFITAFSTTVWFFIVGLVCVFTFLKMLDRRFVPPDESYQPLPRTSSRVRRMKHYLLKSRIPYRLRKALQSTLSRMVGQGGYDPIEGKTSSRQWVLNLLIALCSLFLILTYEAAMT 158
BLAST of Gcaud2365.t1 vs. uniprot
Match: R7Q656_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q656_CHOCR) HSP 1 Score: 64.3 bits (155), Expect = 1.380e-9 Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 0
Query: 72 LMDSRFAPAP-SYHPLPNTQPFFIRFWYGLINHPLSYRIRRSIRITLSRMILSPDVDDIR---NAAQWFIDLLQALCSLFLLMVYSASGT 157
++D RF P SY PLP T R + L+ + YR+R++++ T+SRM+ D I ++ QW ++LL ALCSLFL++ Y ++ T
Sbjct: 1 MLDRRFVPPDESYQPLPRTSSRVRRMKHYLLKSRIPYRLRKALQSTMSRMVGQGGYDPIEGKTSSRQWVLNLLIALCSLFLILTYESAMT 90 The following BLAST results are available for this feature:
BLAST of Gcaud2365.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2365.t1 ID=Gcaud2365.t1|Name=Gcaud2365.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=324bpback to top |