Gcaud2356.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2356.t1 vs. uniprot
Match: A0A2V3J060_9FLOR (RING-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J060_9FLOR) HSP 1 Score: 238 bits (608), Expect = 9.360e-74 Identity = 121/217 (55.76%), Postives = 154/217 (70.97%), Query Frame = 0
Query: 1 MRVLPTAQHAL--RQVTEISSTAFPSAIRTLASIIASITMVITIYLGYRKCMRGRDGSFTADRGQEQAFSIPLTSYEEPGNAYSDEYLPVYVGGGRYVYVSRNELPRDPPHTVRRDASVPPRFDANTLKQFEATNEEKQHPCPICLEELETEPVSAGQCLHLMHTSCLTSWLNKDVNSNCPVCRVRIEESASFDMLRGKVIELPSLAHAPGERNGVV 215
M VL T Q + + ++ ST+FP+AIRTLAS++AS+TMV+TIYLGY+KC R R SF A+R +E A PLTS ++ N + D +PVYVG GRY+Y+SR+E+PR P H VR ++ PRFDA++LK FEA E+Q C ICLE+LE E VSAGQCLHLMHT+CL SWL KD+NSNCPVCRVRI ESAS + L + + +PS G G V
Sbjct: 1 MPVLLTVQRLVSRQSAVDVGSTSFPAAIRTLASVVASVTMVVTIYLGYKKCFRNRLDSFEAERRREAAHGFPLTSLDQGSNGFED-LVPVYVGEGRYMYISRDEIPRRPQHVVRVNSVHSPRFDADSLKIFEAGPSERQQACAICLEQLEEETVSAGQCLHLMHTNCLASWLRKDINSNCPVCRVRIFESASLESLGERAVGIPSQTAGDGSEMGNV 216
BLAST of Gcaud2356.t1 vs. uniprot
Match: A0A2V3IYA4_9FLOR (RING-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYA4_9FLOR) HSP 1 Score: 82.8 bits (203), Expect = 2.410e-15 Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 0
Query: 124 NTLKQFEATNEEKQHPCPICLEELETEPVSAGQCLHLMHTSCLTSWLNKDVNSNCPVCRVRIEESA 189
N+L F A +++ PC +CLE+L + VS+GQCLH++HT CL +WL KD + CPVCRV IEE A
Sbjct: 112 NSLASFRAAEKDRALPCTVCLEDLGSRGVSSGQCLHVIHTDCLQTWLAKDKKNACPVCRVPIEEGA 177
BLAST of Gcaud2356.t1 vs. uniprot
Match: A0A2V3J0E8_9FLOR (RING-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0E8_9FLOR) HSP 1 Score: 81.3 bits (199), Expect = 4.370e-15 Identity = 45/101 (44.55%), Postives = 53/101 (52.48%), Query Frame = 0
Query: 77 PGNAYSDEYLPVYVGGGRYVYVSRNELPRDPPHTVRRDASVP----PRFDANTLKQFEATNEEKQHPCPICLEELETEPVSAGQCLHLMHTSCLTSWLNKD 173
P A+ Y P+YV PH A+ P PR D + L F+A +EK +PCPICL LE E VS GQCLHL+HTSCL SWL KD
Sbjct: 24 PRAAHHIHYNPMYVSAA--------------PHQSHPSAAPPELQDPRIDVDDLLSFDAPEKEKNNPCPICLAPLEDEQVSTGQCLHLIHTSCLRSWLAKD 110
BLAST of Gcaud2356.t1 vs. uniprot
Match: A0A2V3J043_9FLOR (Putative E3 ubiquitin-protein ligase RHA1A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J043_9FLOR) HSP 1 Score: 62.0 bits (149), Expect = 1.560e-7 Identity = 26/58 (44.83%), Postives = 33/58 (56.90%), Query Frame = 0
Query: 125 TLKQFEATNEEKQHPCPICLEELETEPVSAGQCLHLMHTSCLTSWLNKDVNSNCPVCR 182
+L F+ C ICLE L VS+GQCLHL+H +CL +WL + CPVCR
Sbjct: 76 SLASFKVAERHASRECAICLEALADNVVSSGQCLHLLHQTCLNAWLASSPRALCPVCR 133 The following BLAST results are available for this feature:
BLAST of Gcaud2356.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2356.t1 ID=Gcaud2356.t1|Name=Gcaud2356.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=327bpback to top |