Gcaud2214.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2214.t1
Unique NameGcaud2214.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length233
Homology
BLAST of Gcaud2214.t1 vs. uniprot
Match: A0A2V3IN02_9FLOR (Enoyl-CoA delta isomerase 1, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN02_9FLOR)

HSP 1 Score: 265 bits (678), Expect = 4.020e-86
Identity = 136/209 (65.07%), Postives = 162/209 (77.51%), Query Frame = 0
Query:   24 RGNIFSAGNDLTELHAPSTSKQRFYTFWKVSTLFLARLYKTPLYTIAALRGATPAGGCVLSLCCDYRVALESTMMGLNEVAIGLNVPKYYALLLLNLCTVRSEGERMISKGTMINAQRAKRLGLIDDVVTGDSNQLIHSALRVASKFSDRRETLGRAGTKVEVRRHFADDWENYATEEAQKGWVKLCEPDVSKRVGYVISQLSARKAKI 232
            RGNIFSAGNDLTELHAPSTS+ RF TFW   TLFLARLYKTPL TIAALRGATPAGGC ++LCCDYRVAL +T +GLNEVAIGL+VPK++ALLL    TV SE E M+ +GTMI+AQ AKRLGLID ++ G+S +LI +A R+A   S   E  GRA TK+ +R  FAD+WE+YA EEA+  W  L EP V   +G +IS+LS RKAK+
Sbjct:   70 RGNIFSAGNDLTELHAPSTSRSRFITFWTTCTLFLARLYKTPLCTIAALRGATPAGGCCMALCCDYRVALANTTIGLNEVAIGLSVPKFWALLLQRTATVTSEAEDMLLRGTMISAQSAKRLGLIDQLLQGNSIKLIGAAFRLAETSSHLTEAPGRAATKLAIRGAFADEWESYANEEARSAWESLSEPTVVHTLGSLISRLSTRKAKM 278          
BLAST of Gcaud2214.t1 vs. uniprot
Match: R7QFM3_CHOCR (3,2-trans-enoyl-CoA isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFM3_CHOCR)

HSP 1 Score: 236 bits (601), Expect = 2.250e-74
Identity = 116/206 (56.31%), Postives = 153/206 (74.27%), Query Frame = 0
Query:   24 RGNIFSAGNDLTELHAPSTSKQRFYTFWKVSTLFLARLYKTPLYTIAALRGATPAGGCVLSLCCDYRVALESTMMGLNEVAIGLNVPKYYALLLLNLCTVRSEGERMISKGTMINAQRAKRLGLIDDVVTGDSNQLIH-SALRVASKFSDRRETLGRAGTKVEVRRHFADDWENYATEEAQKGWVKLCEPDVSKRVGYVISQLSAR 228
            RG+IFSAGNDLTELH PST+++RF  FW  ST FLARLYKTPL+TI+A+RGATPAGG V+SLCCDYR+AL +TMMGLNEVAIGL VP+Y+  LLL   + R+ GE +++ G MINA  A  LGL++ +V GD    +H +AL  A +++ ++ET GRA TK+ VR+ FAD WE Y   E+++ W  L +P V K +G ++ QLS +
Sbjct:   74 RGSIFSAGNDLTELHVPSTTERRFKKFWTTSTSFLARLYKTPLFTISAMRGATPAGGFVMSLCCDYRIALSNTMMGLNEVAIGLAVPRYWGRLLLLTISNRARGEEILANGKMINASEAYSLGLVNKIVDGDQKDHLHENALLAAQQWAKQKETYGRADTKLSVRQEFADSWEEYGVPESERSWKMLSKPKVVKILGAIMHQLSKK 279          
BLAST of Gcaud2214.t1 vs. uniprot
Match: A0A090LXZ0_OSTTA (Crotonase superfamily n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090LXZ0_OSTTA)

HSP 1 Score: 181 bits (459), Expect = 3.570e-53
Identity = 95/206 (46.12%), Postives = 134/206 (65.05%), Query Frame = 0
Query:   27 IFSAGNDLTELHAPSTSKQRFYTFWKVSTLFLARLYKTPLYTIAALRGATPAGGCVLSLCCDYRVALESTMMGLNEVAIGLNVPKYYALLLLNLCTVRSEGERMISKGTMINAQRAKRLGLIDDVVTGDSNQLIHSALRVASKFSDRRETLGRAGTKVEVRRHFADDWENYATEEAQKGWVKLCEPDVSKRVGYVISQLSARKAKI 232
            +F+AGND+TEL+AP T+++R+  FW   T FLARL K+ L T+ A+RGA PAGGCV++LCCDYRV      +GLNEVA+G++VPKY+A L L+ C  R +GE ++ +G +I    A  +GLID+VV      L+ SA  V  ++  +     RA TK  +R  F+  WE+YA EE + GW  L  P + K +G V+ +LS  KAK+
Sbjct:   64 VFTAGNDVTELYAPRTTRKRYREFWLTQTKFLARLLKSRLATVCAIRGACPAGGCVVALCCDYRVQTTEGTLGLNEVALGISVPKYWAELFLDRCNDRVKGESLLQRGVLIRPAEALGIGLIDEVV--GEGALMASASSVMDRYL-KVPPGARATTKQTIRSEFSARWESYAEEEVKGGWKMLNNPHIVKALGGVLMKLSGGKAKL 266          
BLAST of Gcaud2214.t1 vs. uniprot
Match: A4RR99_OSTLU (Uncharacterized protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4RR99_OSTLU)

HSP 1 Score: 179 bits (455), Expect = 1.390e-52
Identity = 93/209 (44.50%), Postives = 134/209 (64.11%), Query Frame = 0
Query:   24 RGNIFSAGNDLTELHAPSTSKQRFYTFWKVSTLFLARLYKTPLYTIAALRGATPAGGCVLSLCCDYRVALESTMMGLNEVAIGLNVPKYYALLLLNLCTVRSEGERMISKGTMINAQRAKRLGLIDDVVTGDSNQLIHSALRVASKFSDRRETLGRAGTKVEVRRHFADDWENYATEEAQKGWVKLCEPDVSKRVGYVISQLSARKAKI 232
            R ++F+AGND+ EL+AP T+ +R+  FW   T FL+RL  T L T+ A+RGA PAGGCV++LCCDYR+   S  +GLNEVA+G+ VP+Y+A L L  C  R +GE ++ +G ++    A+ LGLID+VV      L+ +A     ++  +  +  RA TK  +R HF+  W  YA EEA+ GW  L EP + K +G V+ +LS  KAK+
Sbjct:   60 RRSVFTAGNDIAELYAPKTTWKRYREFWLTQTTFLSRLLSTRLATVCAIRGACPAGGCVVALCCDYRLQTTSGSLGLNEVALGIAVPQYWAELFLYRCIDRVKGESLLQRGVLVRPLEAQSLGLIDEVV--GEGALMSAAASAMERYL-KLPSSARATTKRTIRSHFSASWAAYAEEEAKGGWKMLNEPHIVKALGGVLMKLSGGKAKL 265          
BLAST of Gcaud2214.t1 vs. uniprot
Match: A0A7S0SJA1_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJA1_9CHLO)

HSP 1 Score: 179 bits (454), Expect = 2.200e-52
Identity = 98/228 (42.98%), Postives = 144/228 (63.16%), Query Frame = 0
Query:   15 VTQLQI-PQTRG---------NIFSAGNDLTELHAPSTSKQRFYTFWKVSTLFLARLYKTPLYTIAALRGATPAGGCVLSLCCDYRVALESTMMGLNEVAIGLNVPKYYALLLLNLCTVRSEGERMISKGTMINAQRAKRLGLIDDVVTGDSNQLIHSALRVASKFSDRRETLGRAGTKVEVRRHFADDWENYATEEAQKGWVKLCEPDVSKRVGYVISQLSARKAKI 232
            +T+L+  PQ RG         +IF+AGND+ EL+A +TS++R+  FW+  T+FL RL ++PL T+ A+RGA PAGGC ++LCCDYRV  ++   GLNEV +G+ VPKY+A L  +L + R+ G+  +  GT++N Q AK +GL+ +VV G +  ++ +A R  +          R  TKV +R  F+ +WE YA EEA  GW  L  P V   +G VI++LS  KAK+
Sbjct:   45 LTELETSPQIRGVILASELKKHIFTAGNDIKELYAKTTSQERYTAFWRTQTIFLCRLLRSPLATVCAIRGACPAGGCAVALCCDYRVQSDTGTFGLNEVQLGIPVPKYWAKLF-SLVSGRTAGDLTLQLGTLLNPQEAKSMGLLHEVVPGAA--VMPAAERAMTSMFLTLPDEARGATKVNMRGEFSAEWEAYAEEEAVSGWAMLSTPAVMATLGGVIARLSKGKAKL 269          
BLAST of Gcaud2214.t1 vs. uniprot
Match: C1MQK5_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MQK5_MICPC)

HSP 1 Score: 177 bits (450), Expect = 1.630e-51
Identity = 94/210 (44.76%), Postives = 126/210 (60.00%), Query Frame = 0
Query:   24 RGNIFSAGNDLTELHAPSTSKQRFYTFWKVSTLFLARLYKTPLYTIAALRGATPAGGCVLSLCCDYRVALESTMMGLNEVAIGLNVPKYYALLLLNLCTVRSEGERMISKGTMINAQRAKRLGLIDDVVTGDSNQL--IHSALRVASKFSDRRETLGRAGTKVEVRRHFADDWENYATEEAQKGWVKLCEPDVSKRVGYVISQLSARKAK 231
            R  IF+AGND+ ELHAPSTS  R+  FWK  T FL RL ++PL T+ A+RGA PAGGC +SLCCDYR        GLNEVA+G+ VPK++A L +   T R++    + +G +++   AK +GLI ++   D+  L     AL    K  D      RA TK  V R F+++WE Y  EEA+ GW  L EP +   +G VI +LS+ K K
Sbjct:   75 RKPIFTAGNDINELHAPSTSATRYAEFWKTQTTFLCRLLRSPLSTVCAIRGACPAGGCAVSLCCDYRAQTTHGTFGLNEVALGIPVPKFWARLFVESATSRADATLALLRGALLSPAEAKGIGLIHELAASDAALLPTAERALATLLKLPDD----ARAATKANVVRAFSEEWEAYIAEEARGGWAMLNEPAIETAMGNVIERLSSGKGK 280          
BLAST of Gcaud2214.t1 vs. uniprot
Match: E1ZF97_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZF97_CHLVA)

HSP 1 Score: 172 bits (436), Expect = 1.250e-49
Identity = 91/208 (43.75%), Postives = 132/208 (63.46%), Query Frame = 0
Query:   24 RGNIFSAGNDLTELHAPSTSKQRFYTFWKVSTLFLARLYKTPLYTIAALRGATPAGGCVLSLCCDYRVALESTMMGLNEVAIGLNVPKYYALLLLNLCTVRSEGERMISKGTMINAQRAKRLGLIDDVVTGDSNQLIHSALRVASKFSDRRETLGRAGTKVEVRRHFADDWENYATEEAQKGWVKLCEPDVSKRVGYVISQLSARKAK 231
            R ++F+AGND+ EL+AP TS++R+  FW VS  FLARLY +PL T+AA+RGA PAGGC L++CCDYRV  E+  +GLNEVA+G++VPK +A L+  +  +    ER++    M+  + AK +GLIDDV   +   L+ +A    ++     +   RA TK+ +R  +A  W  YA  EA+  W  LC P V  ++G V+ +LS  K K
Sbjct:   63 RRDVFTAGNDINELYAPLTSRERYREFWLVSNRFLARLYTSPLVTVAAIRGACPAGGCCLAMCCDYRVMTEAGSIGLNEVALGISVPKMWAGLMARIIGI-GPAERLLQFAVMLQPEAAKEVGLIDDVAPKEG--LLAAAEEAMAQMLVSPD-FSRAETKLNLRGDYAQQWAAYAEPEAEGAWEMLCSPAVVGQLGAVLERLSGGKKK 266          
BLAST of Gcaud2214.t1 vs. uniprot
Match: C1DYG1_MICCC (EnoylCoA hydratase/isomerase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DYG1_MICCC)

HSP 1 Score: 167 bits (422), Expect = 1.530e-47
Identity = 89/208 (42.79%), Postives = 123/208 (59.13%), Query Frame = 0
Query:   24 RGNIFSAGNDLTELHAPSTSKQRFYTFWKVSTLFLARLYKTPLYTIAALRGATPAGGCVLSLCCDYRVALESTMMGLNEVAIGLNVPKYYALLLLNLCTVRSEGERMISKGTMINAQRAKRLGLIDDVVTGDSNQLIHSALRVASKFSDRRETLGRAGTKVEVRRHFADDWENYATEEAQKGWVKLCEPDVSKRVGYVISQLSARKAK 231
            R +IF+AGND+ ELHAPSTS+ R+  FW+  T FL RL ++PL T+ A+RGA PAGGC ++LCCDYRV  ++   GLNEVA+G+ VPK++A   +      +  +  +  G ++    A  LGL+D+VV   +  LI +A R    F    +   R  TK  VR  F+  WE Y  EEA  GW  L  P+V   +G VI +LS  K +
Sbjct:   65 RKDIFTAGNDIKELHAPSTSEARYREFWRTQTTFLCRLLRSPLATVCAIRGACPAGGCAVALCCDYRVQSDTGTFGLNEVALGIPVPKFWARRFVACANDPARADLTLQLGKLLAPSEAHALGLLDEVVPAAA--LIPAATRAMEGFLKTPDG-ARHATKANVRGEFSAAWEAYIEEEASGGWAMLSTPEVEATLGKVIERLSGNKRR 269          
BLAST of Gcaud2214.t1 vs. uniprot
Match: A0A2P6TU34_CHLSO (Enoyl hydratase isomerase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TU34_CHLSO)

HSP 1 Score: 166 bits (420), Expect = 4.020e-47
Identity = 92/215 (42.79%), Postives = 131/215 (60.93%), Query Frame = 0
Query:   21 PQTRG---------NIFSAGNDLTELHAPSTSKQRFYTFWKVSTLFLARLYKTPLYTIAALRGATPAGGCVLSLCCDYRVALESTMMGLNEVAIGLNVPKYYALLLLNLCTVRSEGERMISKGTMINAQRAKRLGLIDDVVTGDSNQLIHSALRVASKFSDRRETLGRAGTKVEVRRHFADDWENYATEEAQKGWVKLCEPDVSKRVGYVISQLS 226
            PQ RG         ++F+AGND+ EL AP TS++R+  FW  S  FLARLY +PL TIAA+RGA PAGGC LS+CCDYR+  ES  +GLNEVA+G++VPK +A L+  +       ++++    ++  Q AK LGL+DD+V  D   L+ +A  V  +     +  GR  TK+ +R  FA +W  +A  EA+  W  L  P V + +G V+ +LS
Sbjct:   50 PQVRGVIFASGLRRDVFTAGNDIKELFAPLTSQERYTEFWLTSNRFLARLYASPLVTIAAIRGACPAGGCCLSMCCDYRIMTESGHIGLNEVALGISVPKMWAALMGRIIGT-GPADKLLQNAVLLQPQDAKDLGLVDDIVPKDG--LLAAAEEVMREMLKMPDG-GRQATKLNLRADFAAEWAAFAEPEAEGAWQMLSSPAVVEALGGVLQRLS 260          
BLAST of Gcaud2214.t1 vs. uniprot
Match: A0A5J4YT30_PORPP (Enoyl-CoA delta isomerase 1, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT30_PORPP)

HSP 1 Score: 164 bits (415), Expect = 3.280e-46
Identity = 88/206 (42.72%), Postives = 130/206 (63.11%), Query Frame = 0
Query:   27 IFSAGNDLTELHAPSTSKQRFYTFWKVSTLFLARLYKTPLYTIAALRGATPAGGCVLSLCCDYRVALESTMMGLNEVAIGLNVPKYYALLLLNLCTVRSEGERMISKGTMINAQRAKRLGLIDDVV--TGDSNQLIHSALRVASKF-SDRRETLGRAGTKVEVRRHFADDWENYATEEAQKGWVKLCEPDVSKRVGYVISQLSARK 229
            +FSAGND+TELHA STS+ RF  FW   T FLARLY +PL T+A + G  PAGGCV++LCCD RVA  + ++GLNE  +G+  P+++A L++   TV    E+++ +G +++AQRA +LGL+  VV   G   +L+      A ++    R   GRA TK  +R+ F+D W   A  EA++ W  L  P V +++  V+ QLS ++
Sbjct:   79 VFSAGNDITELHAKSTSRDRFDAFWTTLTRFLARLYVSPLVTVACISGFCPAGGCVMALCCDLRVANRTAVIGLNESNLGIIPPQFWAELMIK--TVGPPAEQLLVQGELVDAQRALQLGLVHRVVDSAGSRAELLEHCCEAAEQYLKATRSDAGRALTKAHLRKPFSDAWAANAQREAEQSWELLNRPVVMEQLTAVLEQLSGKR 282          
The following BLAST results are available for this feature:
BLAST of Gcaud2214.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IN02_9FLOR4.020e-8665.07Enoyl-CoA delta isomerase 1, mitochondrial n=1 Tax... [more]
R7QFM3_CHOCR2.250e-7456.313,2-trans-enoyl-CoA isomerase n=1 Tax=Chondrus cri... [more]
A0A090LXZ0_OSTTA3.570e-5346.12Crotonase superfamily n=1 Tax=Ostreococcus tauri T... [more]
A4RR99_OSTLU1.390e-5244.50Uncharacterized protein n=2 Tax=Ostreococcus sp. '... [more]
A0A7S0SJA1_9CHLO2.200e-5242.98Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
C1MQK5_MICPC1.630e-5144.76Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
E1ZF97_CHLVA1.250e-4943.75Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
C1DYG1_MICCC1.530e-4742.79EnoylCoA hydratase/isomerase n=1 Tax=Micromonas co... [more]
A0A2P6TU34_CHLSO4.020e-4742.79Enoyl hydratase isomerase n=1 Tax=Chlorella soroki... [more]
A0A5J4YT30_PORPP3.280e-4642.72Enoyl-CoA delta isomerase 1, mitochondrial n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001753Enoyl-CoA hydratase/isomerasePFAMPF00378ECH_1coord: 24..177
e-value: 9.8E-25
score: 87.3
NoneNo IPR availableGENE3D3.90.226.10coord: 14..205
e-value: 1.8E-31
score: 111.2
NoneNo IPR availablePANTHERPTHR11941ENOYL-COA HYDRATASE-RELATEDcoord: 25..229
NoneNo IPR availablePANTHERPTHR11941:SF45ENOYL-COA DELTA ISOMERASE 1, MITOCHONDRIALcoord: 25..229
NoneNo IPR availableCDDcd06558crotonase-likecoord: 25..169
e-value: 1.0792E-31
score: 113.039
IPR018376Enoyl-CoA hydratase/isomerase, conserved sitePROSITEPS00166ENOYL_COA_HYDRATASEcoord: 69..89
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 24..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_492_length_23814_cov_5.019981contigNODE_492_length_23814_cov_5.019981:7744..8602 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2214.t1Gcaud2214.t1Gracilaria caudata M_176_S67 malemRNANODE_492_length_23814_cov_5.019981 7744..8602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2214.t1 ID=Gcaud2214.t1|Name=Gcaud2214.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=233bp
LPSTIRHGFCFEVNVTQLQIPQTRGNIFSAGNDLTELHAPSTSKQRFYTF
WKVSTLFLARLYKTPLYTIAALRGATPAGGCVLSLCCDYRVALESTMMGL
NEVAIGLNVPKYYALLLLNLCTVRSEGERMISKGTMINAQRAKRLGLIDD
VVTGDSNQLIHSALRVASKFSDRRETLGRAGTKVEVRRHFADDWENYATE
EAQKGWVKLCEPDVSKRVGYVISQLSARKAKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001753Enoyl-CoA_hydra/iso
IPR018376Enoyl-CoA_hyd/isom_CS
IPR029045ClpP/crotonase-like_dom_sf