Gcaud2054.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud2054.t1
Unique Name	Gcaud2054.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	414

Homology

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BLAST of Gcaud2054.t1 vs. uniprot
Match: ATPB_GRATL (ATP synthase subunit beta, chloroplastic n=48 Tax=Rhodymeniophycidae TaxID=2045261 RepID=ATPB_GRATL)

HSP 1 Score: 785 bits (2028), Expect = 2.310e-285
Identity = 406/413 (98.31%), Postives = 412/413 (99.76%), Query Frame = 0

Query:    1 MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGNIKSEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINADDLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGQKHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEESIKGFNMILGGELDDLPEQAFYLVGNIEEAISKAEKLK 413
            MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLG+I+SEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINAD+LKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVG +HYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLE+SIKGFNMILGGELDDLPEQAFYLVGNI+EAISKAEKLK
Sbjct:   63 MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGDIQSEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINADNLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGSQHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEDSIKGFNMILGGELDDLPEQAFYLVGNIDEAISKAEKLK 475

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BLAST of Gcaud2054.t1 vs. uniprot
Match: W8DVP1_9FLOR (ATP synthase subunit beta, chloroplastic n=14 Tax=Rhodymeniophycidae TaxID=2045261 RepID=W8DVP1_9FLOR)

HSP 1 Score: 785 bits (2028), Expect = 2.490e-285
Identity = 407/413 (98.55%), Postives = 411/413 (99.52%), Query Frame = 0

Query:    1 MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGNIKSEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINADDLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGQKHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEESIKGFNMILGGELDDLPEQAFYLVGNIEEAISKAEKLK 413
            MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLG I+SEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINA++LKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGQKHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSL+ESIKGFNMIL GELDDLPEQAFYLVGNIEEAISKAEKLK
Sbjct:   65 MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGQIQSEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINANNLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGQKHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLQESIKGFNMILSGELDDLPEQAFYLVGNIEEAISKAEKLK 477

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BLAST of Gcaud2054.t1 vs. uniprot
Match: A0A1Z1M450_9FLOR (ATP synthase subunit beta, chloroplastic n=9 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A1Z1M450_9FLOR)

HSP 1 Score: 752 bits (1942), Expect = 2.700e-272
Identity = 391/413 (94.67%), Postives = 398/413 (96.37%), Query Frame = 0

Query:    1 MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGNIKSEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINADDLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGQKHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEESIKGFNMILGGELDDLPEQAFYLVGNIEEAISKAEKLK 413
            MSSTEGLKRG EV DT  PITVPVGIPTLGRIFNVLGEPVDNLG+I SED LPIHR APSFTQLETKPSIFETGIKVVDLLAPYR+GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINA++LKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG LQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR LAAKGIYPAVDPLGSTSTMLQP IVG +HYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEE+ KGF MIL GELDDLPEQAFYLVGNIEEAI+KAE LK
Sbjct:   61 MSSTEGLKRGSEVIDTEKPITVPVGIPTLGRIFNVLGEPVDNLGDICSEDFLPIHRVAPSFTQLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINAEELKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLGSTSTMLQPDIVGIEHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEEATKGFQMILKGELDDLPEQAFYLVGNIEEAIAKAETLK 473

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BLAST of Gcaud2054.t1 vs. uniprot
Match: A0A1C9C964_9FLOR (ATP synthase subunit beta n=6 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A1C9C964_9FLOR)

HSP 1 Score: 748 bits (1932), Expect = 8.990e-271
Identity = 386/413 (93.46%), Postives = 397/413 (96.13%), Query Frame = 0

Query:    1 MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGNIKSEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINADDLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGQKHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEESIKGFNMILGGELDDLPEQAFYLVGNIEEAISKAEKLK 413
            MSSTEGLKRG+ VTDTGAPITVPVGIPTLGRIFNVLGEPVDNLG++ S D+LPIHR AP+FT+LETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINAD L +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG LQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR LAAKGIYPAVDPL STSTMLQP IVG +HY+TAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARK+ERFLSQPFFVAEVFTGSPGKYVSL+ESIKGF MIL G LDDLPEQAFYLVGNIEEAI KAE LK
Sbjct:   61 MSSTEGLKRGVTVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGDVISSDTLPIHRPAPAFTKLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINADSLTDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGSEHYATAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKVERFLSQPFFVAEVFTGSPGKYVSLKESIKGFLMILKGNLDDLPEQAFYLVGNIEEAIQKAETLK 473

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BLAST of Gcaud2054.t1 vs. uniprot
Match: A0A1Z1M6E6_BOSMO (ATP synthase subunit beta, chloroplastic n=69 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A1Z1M6E6_BOSMO)

HSP 1 Score: 748 bits (1930), Expect = 1.880e-270
Identity = 387/413 (93.70%), Postives = 398/413 (96.37%), Query Frame = 0

Query:    1 MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGNIKSEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINADDLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGQKHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEESIKGFNMILGGELDDLPEQAFYLVGNIEEAISKAEKLK 413
            MSSTEGLKRG EV +T  PITVPVGIPTLGRIFNVLGEPVDNLG++ SEDSLPIHR APSFT+LETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVIN+D L +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG LQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR+LAAKGIYPAVDPLGSTSTMLQP IVG +HY+TAQQIKSTLQRYKELQDIIAILGLDELSE+DRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEE+IKGF MIL GELD LPEQAFYLVGNIEEAISKAE LK
Sbjct:   62 MSSTEGLKRGTEVINTEKPITVPVGIPTLGRIFNVLGEPVDNLGDVSSEDSLPIHRGAPSFTKLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINSDKLTDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRTLAAKGIYPAVDPLGSTSTMLQPDIVGLEHYTTAQQIKSTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEEAIKGFQMILKGELDTLPEQAFYLVGNIEEAISKAETLK 474

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BLAST of Gcaud2054.t1 vs. uniprot
Match: A0A1C9CAW1_9FLOR (ATP synthase subunit beta n=3 Tax=Florideophyceae TaxID=2806 RepID=A0A1C9CAW1_9FLOR)

HSP 1 Score: 742 bits (1915), Expect = 3.490e-268
Identity = 381/413 (92.25%), Postives = 400/413 (96.85%), Query Frame = 0

Query:    1 MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGNIKSEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINADDLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGQKHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEESIKGFNMILGGELDDLPEQAFYLVGNIEEAISKAEKLK 413
            MSST+GL+RGI+VTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGN+ +E++LPIHR+APSFTQLETKPSIFETGIKVVDLLAPYR+GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVI+ + L  SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG LQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR LAAKGIYPAVDPL STSTMLQPSIVG++HY TAQ+IKSTLQRYKELQDIIAILGLDELSE+DRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLE++IKGF MIL GELDDLPEQAFYLVG+I EAI+KAE LK
Sbjct:   61 MSSTDGLRRGIKVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGNVSTENTLPIHRSAPSFTQLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVIDENSLTNSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYGTAQKIKSTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEKAIKGFQMILEGELDDLPEQAFYLVGDIGEAINKAETLK 473

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BLAST of Gcaud2054.t1 vs. uniprot
Match: A0A1Z1MR03_9FLOR (ATP synthase subunit beta, chloroplastic n=8 Tax=Ceramiales TaxID=2802 RepID=A0A1Z1MR03_9FLOR)

HSP 1 Score: 739 bits (1907), Expect = 6.210e-267
Identity = 382/413 (92.49%), Postives = 395/413 (95.64%), Query Frame = 0

Query:    1 MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGNIKSEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINADDLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGQKHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEESIKGFNMILGGELDDLPEQAFYLVGNIEEAISKAEKLK 413
            MSSTEGL+RG EV DTG PITVPVGIPTLGRIFNV+GEPVDNLG I S +SLPIHR AP+FTQLETKPSIFETGIKVVDLLAPYR+GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINA+ L ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRD+NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG LQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR LAAKGIYPAVDPLGSTSTMLQP+IV  +HY TAQQIKSTLQRYKELQDIIAILGLDELSE+DRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLE+SIKGF MIL GELDDLPEQAFYLVG+I+EAI KAE LK
Sbjct:   63 MSSTEGLRRGAEVLDTGNPITVPVGIPTLGRIFNVIGEPVDNLGEIVSPESLPIHRNAPAFTQLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINAEKLTESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLGSTSTMLQPNIVSAEHYDTAQQIKSTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEDSIKGFQMILKGELDDLPEQAFYLVGDIKEAIQKAEGLK 475

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BLAST of Gcaud2054.t1 vs. uniprot
Match: A0A1G4NX03_9FLOR (ATP synthase subunit beta, chloroplastic n=16 Tax=Florideophyceae TaxID=2806 RepID=A0A1G4NX03_9FLOR)

HSP 1 Score: 736 bits (1900), Expect = 7.230e-266
Identity = 373/413 (90.31%), Postives = 398/413 (96.37%), Query Frame = 0

Query:    1 MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGNIKSEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINADDLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGQKHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEESIKGFNMILGGELDDLPEQAFYLVGNIEEAISKAEKLK 413
            MS+T+GLKRG+EV DTGAPITVPVG+PTLGRIFNVLGEPVD+LG++ S+ +LPIHR+AP+FTQLETKPSIFETGIKVVDLLAPYR+GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVIN D+L +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRD+NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG LQERITSTT+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR LAAKGIYPAVDPL STSTMLQP+IVG++HY TAQQ+KSTLQRYKELQDIIAILGLDELSE+DRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLE +IKGF MI  G+LDDLPEQAFYLVG+I EAI KAEK+K
Sbjct:   61 MSATDGLKRGLEVIDTGAPITVPVGLPTLGRIFNVLGEPVDSLGSVNSDSNLPIHRSAPAFTQLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINEDNLPDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVGEEHYDTAQQVKSTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLENAIKGFQMIFKGDLDDLPEQAFYLVGDINEAIDKAEKIK 473

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BLAST of Gcaud2054.t1 vs. uniprot
Match: A0A1G4NT16_9FLOR (ATP synthase subunit beta, chloroplastic n=2 Tax=Nemaliophycidae TaxID=2045258 RepID=A0A1G4NT16_9FLOR)

HSP 1 Score: 731 bits (1887), Expect = 6.650e-264
Identity = 374/413 (90.56%), Postives = 393/413 (95.16%), Query Frame = 0

Query:    1 MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGNIKSEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINADDLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGQKHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEESIKGFNMILGGELDDLPEQAFYLVGNIEEAISKAEKLK 413
            MS+T GLKRG+EV DTG PITVPVG  TLGRIFNVLGEPVD+LGN+  E+ LPIHR+AP+FTQLETKPSIFETGIKVVDLLAPYR+GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVIN ++L +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRD+NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG LQERITST +GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR LAAKGIYPAVDPL STSTMLQP+IVG +HY TAQQ+KSTLQRYKELQDIIAILGLDELSE+DRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLE +IKGF MI  GELDDLPEQAFYLVG+IEEAISKAEKLK
Sbjct:   61 MSATNGLKRGLEVIDTGEPITVPVGTSTLGRIFNVLGEPVDSLGNVSLENKLPIHRSAPAFTQLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINEENLPDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTNEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVGDEHYKTAQQVKSTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLENAIKGFQMIFRGELDDLPEQAFYLVGDIEEAISKAEKLK 473

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BLAST of Gcaud2054.t1 vs. uniprot
Match: A0A1X9PV05_9RHOD (ATP synthase subunit beta n=1 Tax=Rhodochaete parvula TaxID=110510 RepID=A0A1X9PV05_9RHOD)

HSP 1 Score: 731 bits (1887), Expect = 6.900e-264
Identity = 372/413 (90.07%), Postives = 392/413 (94.92%), Query Frame = 0

Query:    1 MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGNIKSEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINADDLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGQKHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLEESIKGFNMILGGELDDLPEQAFYLVGNIEEAISKAEKLK 413
            MSST+GLKRG+EV D+GAPI+VPVG PTLGRIFNVLGEPVDNLG++  +D+LPIHR AP FTQLETKPSIFETGIKVVDLLAPYR+GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLY EMKESKVIN + + +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG LQERITSTT+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR LAAKGIYPAVDPL STSTMLQP IVGQ+HY+TAQQ+KSTLQRYKELQDIIAILGLDELSE+DR TVARARKIERFLSQPFFVAEVFTGSPGKYVSL E+IKGF MIL GELDDLPEQAFYLVGNI+EAI KA  +K
Sbjct:   62 MSSTDGLKRGVEVVDSGAPISVPVGTPTLGRIFNVLGEPVDNLGDVSKQDTLPIHRPAPLFTQLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEESITDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGQEHYTTAQQVKSTLQRYKELQDIIAILGLDELSEEDRATVARARKIERFLSQPFFVAEVFTGSPGKYVSLSEAIKGFQMILSGELDDLPEQAFYLVGNIDEAIDKANSMK 474

The following BLAST results are available for this feature:

BLAST of Gcaud2054.t1 vs. uniprot

BLAST of Gcaud2054.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
ATPB_GRATL	2.310e-285	98.31	ATP synthase subunit beta, chloroplastic n=48 Tax=...	[more]
W8DVP1_9FLOR	2.490e-285	98.55	ATP synthase subunit beta, chloroplastic n=14 Tax=...	[more]
A0A1Z1M450_9FLOR	2.700e-272	94.67	ATP synthase subunit beta, chloroplastic n=9 Tax=R...	[more]
A0A1C9C964_9FLOR	8.990e-271	93.46	ATP synthase subunit beta n=6 Tax=Rhodymeniophycid...	[more]
A0A1Z1M6E6_BOSMO	1.880e-270	93.70	ATP synthase subunit beta, chloroplastic n=69 Tax=...	[more]
A0A1C9CAW1_9FLOR	3.490e-268	92.25	ATP synthase subunit beta n=3 Tax=Florideophyceae ...	[more]
A0A1Z1MR03_9FLOR	6.210e-267	92.49	ATP synthase subunit beta, chloroplastic n=8 Tax=C...	[more]
A0A1G4NX03_9FLOR	7.230e-266	90.31	ATP synthase subunit beta, chloroplastic n=16 Tax=...	[more]
A0A1G4NT16_9FLOR	6.650e-264	90.56	ATP synthase subunit beta, chloroplastic n=2 Tax=N...	[more]
A0A1X9PV05_9RHOD	6.900e-264	90.07	ATP synthase subunit beta n=1 Tax=Rhodochaete parv...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 86..278 e-value: 1.0E-8 score: 45.0
IPR024034	ATPase, F1/V1 complex, beta/alpha subunit, C-terminal	GENE3D	1.10.1140.10		coord: 297..413 e-value: 7.9E-59 score: 198.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 20..296 e-value: 8.3E-117 score: 391.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 21..299
IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	PFAM	PF00006	ATP-synt_ab	coord: 74..294 e-value: 1.6E-63 score: 214.2
IPR005722	ATP synthase, F1 complex, beta subunit	TIGRFAM	TIGR01039	TIGR01039	coord: 1..412 e-value: 5.2E-229 score: 758.6
IPR005722	ATP synthase, F1 complex, beta subunit	HAMAP	MF_01347	ATP_synth_beta_bact	coord: 1..412 score: 49.802113
None	No IPR available	PANTHER	PTHR15184	ATP SYNTHASE	coord: 1..413
None	No IPR available	CDD	cd18110	ATP-synt_F1_beta_C	coord: 301..408 e-value: 8.75176E-76 score: 228.902
None	No IPR available	CDD	cd01133	F1-ATPase_beta	coord: 19..299 e-value: 0.0 score: 558.383
None	No IPR available	SUPERFAMILY	47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase	coord: 297..412
IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	PROSITE	PS00152	ATPASE_ALPHA_BETA	coord: 285..294

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_2400_length_5803_cov_214.791842	contig	NODE_2400_length_5803_cov_214.791842:4497..5738 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud2054.t1	Gcaud2054.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_2400_length_5803_cov_214.791842 4497..5738 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud2054.t1 ID=Gcaud2054.t1|Name=Gcaud2054.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=414bp
MSSTEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGNIKSED
SLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGK
TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYEEMKESKVINADDLK
ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRF
VQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTDGSITSIQAVY
VPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPS
IVGQKHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDDRLTVARARKIE
RFLSQPFFVAEVFTGSPGKYVSLEESIKGFNMILGGELDDLPEQAFYLVG
NIEEAISKAEKLK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003593	AAA+_ATPase
IPR024034	ATPase_F1/V1_b/a_C
IPR027417	P-loop_NTPase
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR005722	ATP_synth_F1_bsu
IPR020003	ATPase_a/bsu_AS