Gcaud1970.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1970.t1
Unique NameGcaud1970.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length309
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1970.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..228
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..308
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_297_length_31759_cov_4.165656contigNODE_297_length_31759_cov_4.165656:15490..16416 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1970.t1Gcaud1970.t1Gracilaria caudata M_176_S67 malemRNANODE_297_length_31759_cov_4.165656 15490..16416 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1970.t1 ID=Gcaud1970.t1|Name=Gcaud1970.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=309bp
MSGFLVLALLILPVYSQTVGTGGAADGGGLAYLGSQSFAGSAGPLSVSFG
GGLVGTMNGASAGIGAGGSEGGGSAASTATEGGLSVSGGMGGGFNNNGMR
RGAGGGGSGSVGNAAGSGIGGTGTSSTQALAADSEGLGFASGSHSADGSS
GLGLHGTFATSQPALSNGLGAGSASQSATGGGGTGIGTGNGGSGQGAGQG
HGEHTSSKRTRTAGLSVGEGGAAAGSSGGSDAGISSANADGTFPILGMGI
ALGSAGEGGTTSATGVGGSGSGSAAGISQRDVVIPTRSQERRHPRFRYLS
KRMDLPYS*
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