Gcaud1908.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1908.t1
Unique NameGcaud1908.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length289
Homology
BLAST of Gcaud1908.t1 vs. uniprot
Match: A0A2V3IDG3_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDG3_9FLOR)

HSP 1 Score: 274 bits (701), Expect = 1.140e-87
Identity = 161/318 (50.63%), Postives = 200/318 (62.89%), Query Frame = 0
Query:   16 RDPLLPQK----EETSQACAPQSEDTTIAFQ--GLIWIALAALGFSFMPTAVRLSVSRFDFSTSAAVLLRSIVHLVLSSVALRNFIHISPLDLNPSYRGLLAARGLFGTIAMILVFKSLAHLPAGQCTAVFSFSPIFTMFLSKLFLPRG--------------------------------------------FAAAAYVCVRGMGTEVHFMLSVFALGILGVPVTGVLGGKEAFRQIWSNHKGTGIVFVGSLAAFFAQSCLNKGLQLCKAGEGVIVKNLEVPSAYLFGMLVLNERPSVLRLTGSAVVVSAVIVVGIR 283
            + P LPQ      ET    +P S  T+ A +   L WIALAAL FSFM  ++RLSV+ F FSTSA+VLLRSI HLVLSS+ L +F+H SPL+L P Y  +L  RGLFGT+AM+L FKSL++LPAG+  ++F+ SPI TM LSKL L                                               F+AA YVCVRGMGT VHFMLSVFALGI+G PVT  LGG+EA  QI  N +GT ++ +GSL+AF AQ+CLNKGLQ  KAG+G+I+KNLEVP  Y+  +LVL E+ S  R+ GS +VV AV +VG R
Sbjct:   31 KSPHLPQNLRAPTETDALLSPSSGATSPAPEHYALAWIALAALCFSFMTISIRLSVTHFGFSTSASVLLRSIAHLVLSSMLLVSFVHQSPLNLPPLYLRMLFTRGLFGTVAMVLAFKSLSYLPAGEACSIFACSPILTMILSKLVLKETCAVHEVLCALVALLGVWLIADPSTANSNGDQHVVGALLVLVGALFSAAGYVCVRGMGTRVHFMLSVFALGIIGTPVTAFLGGREAMHQIVYNRRGTAVMLLGSLSAFCAQTCLNKGLQSSKAGQGIIMKNLEVPFVYVLALLVLGEKSSAQRILGSLLVVCAVAIVGWR 348          
BLAST of Gcaud1908.t1 vs. uniprot
Match: A0A2V3J2K6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2K6_9FLOR)

HSP 1 Score: 92.8 bits (229), Expect = 3.250e-18
Identity = 43/127 (33.86%), Postives = 79/127 (62.20%), Query Frame = 0
Query:  159 FAAAAYVCVRGMGTEVHFMLSVFALGILGVPVTGVLGGKEAFRQIWSNHKGTGIVFVGSLAAFFAQSCLNKGLQLCKAGEGVIVKNLEVPSAYLFGMLVLNERPSVLRLTGSAVVVSAVIVVGIRRL 285
            F ++  V  R +G  V+FM++V +L +    ++ +L G   F  + +N  G  +  +  +    AQSCL+K LQ C+AG  ++V+++ +P +Y +G++ L E+PS+L L+G A+VV+AVI + ++ L
Sbjct:  166 FTSSMSVATRFLGRSVNFMVNVLSLAVFLFTISLMLCGPREFDNLKNNIPGLSVNILAGICGCIAQSCLSKSLQFCRAGPALLVRSMTIPFSYCYGLIFLGEKPSLLTLSGVAMVVAAVIALSLKEL 292          
BLAST of Gcaud1908.t1 vs. uniprot
Match: A0A7S2ZLH0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLH0_9RHOD)

HSP 1 Score: 80.9 bits (198), Expect = 8.150e-14
Identity = 41/120 (34.17%), Postives = 73/120 (60.83%), Query Frame = 0
Query:  161 AAAYVCVRGMGTEVHFMLSVFALGILGV---PVTGVLGGKEAFRQIWSNHKGTGIVFVG-SLAAFFAQSCLNKGLQLCKAGEGVIVKNLEVPSAYLFGMLVLNERPSVLRLTGSAVVVSA 276
            A+ Y+ ++ MG  VH+M++V  LGILG+   P+ G + G+  +     N     +VF+G       AQ  +++GLQLC+AG G  V NL++  +++FG++ L+E PS   + G+ ++V++
Sbjct:  211 ASIYIVIKKMGVSVHYMMNVMYLGILGIVLAPIGGFVFGERRWHM--PNAAAEWLVFLGVGFFGLLAQVFISRGLQLCRAGLGAAVTNLQIVFSFIFGIVFLDEIPSGASMIGAIIIVTS 328          
BLAST of Gcaud1908.t1 vs. uniprot
Match: A0A0L0SKH9_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SKH9_ALLM3)

HSP 1 Score: 78.2 bits (191), Expect = 1.110e-12
Identity = 45/131 (34.35%), Postives = 76/131 (58.02%), Query Frame = 0
Query:  160 AAAAYVCVRGMGTEVHFMLSVFALGILGVPVTGVL---GGKEAFRQIWSNH--KGTGIVFVGSLAAFFAQSCLNKGLQLCKAGEGVIVKNLEVPSAYLFGMLVLNERPSVLRLTGSAVVVSAVIVVGIRRL 285
            ++ AYV VR +G   H+++ V   G+    ++GVL      E     W     + T ++ +G + AF  Q  LNKGLQL +AG GV+++NL+V  A++FG+ + +ERP V  + G+ ++V   ++ GI +L
Sbjct:  263 SSCAYVLVRKVGRGAHYLIHVVYFGMASTALSGVLMVIAPDERGPARWPATLLEATVLLAIG-VTAFGGQVLLNKGLQLARAGPGVLMRNLDVVFAFIFGITLFDERPFVTSILGAILIVGTTVLTGIGKL 392          
BLAST of Gcaud1908.t1 vs. uniprot
Match: A0A0L0SHH4_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SHH4_ALLM3)

HSP 1 Score: 73.9 bits (180), Expect = 2.880e-11
Identity = 42/120 (35.00%), Postives = 70/120 (58.33%), Query Frame = 0
Query:  160 AAAAYVCVRGMGTEVHFMLSVFALGILGVPVTGVL---GGKEAFRQIWSNH--KGTGIVFVGSLAAFFAQSCLNKGLQLCKAGEGVIVKNLEVPSAYLFGMLVLNERPSVLRLTGSAVVV 274
            ++ AYV VR +G   H+++ V   G+    ++GVL      E     W     + T ++ +G + AF  Q  LNKGLQL +AG GV+++NL+V  A++FG+ + +ERP V  + G+ ++V
Sbjct:  264 SSCAYVLVRKVGRGAHYLIHVVYFGMASTALSGVLMVFAPDERGPARWPATLLEATVLLTIG-ITAFGGQVLLNKGLQLARAGPGVLMRNLDVVFAFIFGITLFDERPFVTSILGAILIV 382          
BLAST of Gcaud1908.t1 vs. uniprot
Match: A0A8H7PRJ9_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PRJ9_MORIS)

HSP 1 Score: 72.8 bits (177), Expect = 7.180e-11
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 0
Query:  160 AAAAYVCVRGMGTEVHFMLSVFALGILGVPVTGV-LGGKEAFRQIWSNHKGTGIVFVGSLAAFFAQSCLNKGLQLCKAGEGVIVKNLEVPSAYLFGMLVLNERPSVLRLTGSAVVVSAVIVVGIRR 284
            +A AYV VR +G   HFM+ V   G L   ++ + + G + F    + +    +V VG+ A F  Q  LN+GLQ+  AG G +++  ++  A+LFG+L+L+E P++  + G+AV+V     +GI +
Sbjct:  270 SAVAYVTVRKIGKGAHFMVHVVYFGALSSALSPIGIWGFQHFVMPETFNDYLILVLVGTFA-FLGQCLLNQGLQMAPAGPGTLMRMNDIVFAFLFGILLLHEIPTLSSILGAAVIVGCTTALGIHK 394          
BLAST of Gcaud1908.t1 vs. uniprot
Match: A0A1Y2HQ37_9FUNG (Uncharacterized protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HQ37_9FUNG)

HSP 1 Score: 72.4 bits (176), Expect = 8.410e-11
Identity = 46/124 (37.10%), Postives = 72/124 (58.06%), Query Frame = 0
Query:  160 AAAAYVCVRGMGTE-VHFMLSVFALGILGVPVTGVLGGKE-AFRQIWSNHKGTGIVFVGSLAAFFAQSCLNKGLQLCKAGEGVIVKNLEVPSAYLFGMLVLNERPSVLRLTGSAVVVSAVIVVG 281
            +A AYV VR +G    H+M+ V   G++   ++G L   + A R   S ++   +  VG L AF  Q  LN+GLQL +AG GV+++NL+V  AY+FG+ V +E+     L G+ ++V   + VG
Sbjct:  206 SATAYVTVRKLGANGAHYMVHVVYFGLVSTLLSGTLMYVDPATRLPASAYEWCLLALVG-LCAFGGQILLNRGLQLARAGPGVLMRNLDVVFAYVFGVCVFHEQVFWTSLVGAGLIVGTAVGVG 328          
BLAST of Gcaud1908.t1 vs. uniprot
Match: A0A1Y2EMA1_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2EMA1_9FUNG)

HSP 1 Score: 65.5 bits (158), Expect = 1.530e-8
Identity = 36/128 (28.12%), Postives = 73/128 (57.03%), Query Frame = 0
Query:  160 AAAAYVCVRGMGTEVHFMLSVFALGILGVPVTGV-LGGKEAFRQIWSNHKGTGIV--FVGSLAAFFAQSCLNKGLQLCKAGEGVIVKNLEVPSAYLFGMLVLNERPSVLRLTGSAVVVSAVIVVGIRR 284
            AA AYV +R +G E+H+++  F  G++   ++   L   +    +        I+  F+G ++AF  Q  L++G+Q C +G G +++NL+V  +++FGM+   E P    + GS ++V + +++G ++
Sbjct:  169 AAFAYVMIRDIGKEIHYLIHRFYFGVVSTAISACSLFIFKIQDPVLPESLFDWIIYGFIG-ISAFLGQYLLHQGIQHCTSGSGTLLRNLDVVFSFIFGMIFFGEIPGWNSILGSLMIVGSNLMMGFKQ 295          
BLAST of Gcaud1908.t1 vs. uniprot
Match: A0A1Y1XJU0_9FUNG (DUF6-domain-containing protein n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XJU0_9FUNG)

HSP 1 Score: 63.2 bits (152), Expect = 9.220e-8
Identity = 36/129 (27.91%), Postives = 71/129 (55.04%), Query Frame = 0
Query:  160 AAAAYVCVRGMGTEVHFMLSVFALGILGVPVTGVLGGKEAFRQIWSNHKGTGIVFVGSLAAFFAQSCLNKGLQLCKAGEGVIVKNLEVPSAYLFGMLVLNERPSVLRLTGSAVVVSAVIVVGIRRLTGR 288
            ++ A+V +R +G  VH+M+ V   G +    + ++       +I S       + V S++AF  Q  LN GLQL  +G   +++N ++  A++FG+ +  E P++  L G+ +++ + I +GI++  GR
Sbjct:  199 SSIAFVTIRQLGLGVHYMVHVVYFGGISSIFSLIISLIFEPVKIPSTLNDWVGLSVISISAFVGQGLLNYGLQLAPSGPATLMRNFDIVFAFIFGITIFKEIPTMNSLLGTGLILCSTIGMGIKKWAGR 327          
BLAST of Gcaud1908.t1 vs. uniprot
Match: A0A1G8XJ77_9GAMM (EamA domain-containing membrane protein RarD n=3 Tax=Ferrimonas TaxID=44011 RepID=A0A1G8XJ77_9GAMM)

HSP 1 Score: 62.0 bits (149), Expect = 1.990e-7
Identity = 56/203 (27.59%), Postives = 95/203 (46.80%), Query Frame = 0
Query:   26 TSQACAPQSEDTTIAFQGLIWIALAALGFSFMPTAVRLSVSRFDFSTSAAVLLRSIVHLVLSSVALRNFIHISPLDLNPSYRGLLAARGLFGTIAMILVFKSLAHLPAGQCTAVFSFSPIFTMFLSKLFLPRGFAAAAYVCVRGMGTEVHFMLSVFALGILGVPVTGVLGGKEAFRQIWSNHKGTGIVFVGSLAAFFAQSCLN 228
            +S A  P     T++   L +  L+ALGF+ M   V+L+ ++        V  R++V L+LS + +R+      L +   +RGLL ARGL GT+A++ V+ ++  LP  + T +    P+FT  L+  FL         +C+         +LS+  LG + VP  G+    +A    W +     +   GS  A+     L+
Sbjct:   10 SSDAAMPTRSTPTLS---LYYALLSALGFALMTACVKLTSAQ-GIPVLEIVAARALVSLILSYLDIRS----KGLSVLGQHRGLLLARGLVGTLALMCVYYAVTTLPLAEATLLQYLHPVFTAALAWYFLGERVHRFTLICI---------LLSLCGLGAMLVP--GLASADQALP--WFSVAIALLGACGSAVAYILVKTLS 191          
The following BLAST results are available for this feature:
BLAST of Gcaud1908.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2V3IDG3_9FLOR1.140e-8750.63Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3J2K6_9FLOR3.250e-1833.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2ZLH0_9RHOD8.150e-1434.17Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A0L0SKH9_ALLM31.110e-1234.35Uncharacterized protein n=1 Tax=Allomyces macrogyn... [more]
A0A0L0SHH4_ALLM32.880e-1135.00Uncharacterized protein n=1 Tax=Allomyces macrogyn... [more]
A0A8H7PRJ9_MORIS7.180e-1134.13Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A1Y2HQ37_9FUNG8.410e-1137.10Uncharacterized protein n=1 Tax=Catenaria anguillu... [more]
A0A1Y2EMA1_9FUNG1.530e-828.13Uncharacterized protein (Fragment) n=1 Tax=Neocall... [more]
A0A1Y1XJU0_9FUNG9.220e-827.91DUF6-domain-containing protein n=2 Tax=Basidiobolu... [more]
A0A1G8XJ77_9GAMM1.990e-727.59EamA domain-containing membrane protein RarD n=3 T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000620EamA domainPFAMPF00892EamAcoord: 43..155
e-value: 5.1E-8
score: 33.2
coord: 159..280
e-value: 6.0E-9
score: 36.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePANTHERPTHR22911ACYL-MALONYL CONDENSING ENZYME-RELATEDcoord: 159..279
coord: 31..155
NoneNo IPR availablePANTHERPTHR22911:SF6SOLUTE CARRIER FAMILY 35 MEMBER G1coord: 31..155
NoneNo IPR availablePANTHERPTHR22911:SF6SOLUTE CARRIER FAMILY 35 MEMBER G1coord: 159..279
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..95
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 224..263
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 126..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 156..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..125
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 195..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 206..223
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 283..288
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..282
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 202..283
NoneNo IPR availableTMHMMTMhelixcoord: 44..66
NoneNo IPR availableTMHMMTMhelixcoord: 174..196
NoneNo IPR availableTMHMMTMhelixcoord: 110..132
NoneNo IPR availableTMHMMTMhelixcoord: 73..95
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 203..225
NoneNo IPR availableTMHMMTMhelixcoord: 263..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_927_length_16063_cov_4.587278contigNODE_927_length_16063_cov_4.587278:3073..4072 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1908.t1Gcaud1908.t1Gracilaria caudata M_176_S67 malemRNANODE_927_length_16063_cov_4.587278 3073..4072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1908.t1 ID=Gcaud1908.t1|Name=Gcaud1908.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=289bp
MTSADVQFGSRPRSERDPLLPQKEETSQACAPQSEDTTIAFQGLIWIALA
ALGFSFMPTAVRLSVSRFDFSTSAAVLLRSIVHLVLSSVALRNFIHISPL
DLNPSYRGLLAARGLFGTIAMILVFKSLAHLPAGQCTAVFSFSPIFTMFL
SKLFLPRGFAAAAYVCVRGMGTEVHFMLSVFALGILGVPVTGVLGGKEAF
RQIWSNHKGTGIVFVGSLAAFFAQSCLNKGLQLCKAGEGVIVKNLEVPSA
YLFGMLVLNERPSVLRLTGSAVVVSAVIVVGIRRLTGR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom