Gcaud1792.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1792.t1
Unique NameGcaud1792.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length283
Homology
BLAST of Gcaud1792.t1 vs. uniprot
Match: A0A7J7IIQ9_9RHOD (Elongation of fatty acids protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IIQ9_9RHOD)

HSP 1 Score: 166 bits (420), Expect = 2.620e-46
Identity = 90/207 (43.48%), Postives = 134/207 (64.73%), Query Frame = 0
Query:   69 DPFVKHVAIMHNIILAIASAYMNVHATRSIILVSKAQTWLA-TVCTPAQTAVPSPIQATFYLFYLSKFYELLDTFILVMRNKPLSFLHVWHHCTVILSVWGWLEYGVTIGLYGLWFNTFVHVIMYTYFAFSLAGVKMPFKRLITLMQIIQFLTGFASLIPFF---WSYIKVGGCTGLPGLAVTGTTNLSYLVLFLRFYSKSYKSSTK 271
            D  ++ +A +HNIIL++ SA M + A R+++ +++ +  ++ T C+ +    P  I    Y+FYLSK  E +DTF+L  R KPL+ LHVWHH +V+L  W WL +G+T  +YG+ FN  +H +MY YFA++    + P KR+ITLMQI+QF+  F   +P+    W   +  GC GLPGLAV+   N SYL+LF+RFY ++YK  TK
Sbjct:   85 DGVLRLLAFLHNIILSVWSAGMFLGAGRTVLAIARNRGGVSQTFCSSSFGEFPQNIYYWLYMFYLSKPVEFMDTFLLAARGKPLTLLHVWHHASVVLETWSWLRFGLTFSIYGMLFNAGIHAVMYLYFAYTSMQWRFPGKRMITLMQIMQFVASFVLTVPYLILLWK--RPEGCMGLPGLAVSTFCNGSYLLLFVRFYRRTYKVRTK 289          
BLAST of Gcaud1792.t1 vs. uniprot
Match: M1UTA5_CYAM1 (Elongation of fatty acids protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1UTA5_CYAM1)

HSP 1 Score: 160 bits (404), Expect = 5.850e-44
Identity = 84/200 (42.00%), Postives = 126/200 (63.00%), Query Frame = 0
Query:   69 DPFVKHVAIMHNIILAIASAYMNVHATRSIILVSKAQTWLA-TVCTPAQTAVPSPIQATFYLFYLSKFYELLDTFILVMRNKPLSFLHVWHHCTVILSVWGWLEYGVTIGLYGLWFNTFVHVIMYTYFAFSLAGVKMPFKRLITLMQIIQFLTGFASLIPFFWSYIK-VGGCTGLPGLAVTGTTNLSYLVLFLRFYSKSY 266
            D  ++ +A +HN++L+  S  M + A  +++ V+++   +  T C+ +    P  I    Y+FYLSK  E  DTF+L  R KPL+ LHVWHH +V+   W WL YG+   +YG+ FNT +H IMY YFA++    + P+KR ITL+QI+QF+T FA  IP+ + Y +    C G+P LA++   N SYL+LFLRFY ++Y
Sbjct:   82 DQALRLLAFLHNLVLSAWSGVMFLGAASAVVAVTRSDGSIERTFCSSSFDNFPRNIYYWLYMFYLSKPVEFFDTFLLAARGKPLTVLHVWHHASVVFETWSWLRYGLNFSIYGMLFNTAIHTIMYMYFAYASMQWRFPWKRWITLLQIVQFITSFALTIPYLYLYWRNPQRCMGMPALAISTFCNASYLLLFLRFYRRTY 281          
BLAST of Gcaud1792.t1 vs. uniprot
Match: A0A1X6PEF7_PORUM (Elongation of fatty acids protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEF7_PORUM)

HSP 1 Score: 150 bits (379), Expect = 7.820e-40
Identity = 72/140 (51.43%), Postives = 98/140 (70.00%), Query Frame = 0
Query:  128 YLFYLSKFYELLDTFILVMRNKPLSFLHVWHHCTVILSVWGWLEYGVTIGLYGLWFNTFVHVIMYTYFAFSLAGVKMPFKRLITLMQIIQFLTGFASLIPFFWSYIKVGGCTGLPGLAVTGTTNLSYLVLFLRFYSKSYK 267
            YLFYLSKF+EL DTF+L+ R KPL+ LHVWHH +V+   W WL++G+T+G  G+  N  VHV+MY+YF  S+ G ++PF+RLIT  QI QF+  F    P   ++++   C G+P LAV+   N SYL LFLRFY K+Y+
Sbjct:  178 YLFYLSKFWELGDTFVLLARRKPLTLLHVWHHMSVMGETWAWLQFGMTLGAVGMAVNAGVHVLMYSYFGASILGRRLPFRRLITRTQITQFVASFLLAAPMVVTHVRSRSCAGMPALAVSAFCNASYLALFLRFYRKAYR 317          
BLAST of Gcaud1792.t1 vs. uniprot
Match: A0A2R6WA11_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WA11_MARPO)

HSP 1 Score: 135 bits (339), Expect = 1.760e-34
Identity = 83/239 (34.73%), Postives = 132/239 (55.23%), Query Frame = 0
Query:   44 SVLLAIAV-YLILLRVIRSQCFALRDDPFVKHVAIMHNIILAIASAYMNVHATRSIILVSKAQTWL--------ATVCTPAQTAVPSPIQATFYLFYLSKFYELLDTFILVMRNKPLSFLHVWHHCTVILSVWGWLEYGVTIGLYGLWFNTFVHVIMYTYFAFSLAGVKMPFKRLITLMQIIQFLTGFASLIPFFWSYIKVGGCTGLPGLAVTGTTNLSYLVLFLRFYSKSYKSSTKID 273
            SVL+  AV YL L+ V+R    + +    +  + I+HNI+L++ S  M     ++  L  ++  W+          +C P  T    P+    Y++YLSKFYEL+DT +LV+R +PL+FLHV+HH TVI   + WLEY +++ +  L  NT VHV+MYTY+     G    +K+L+T +QI+QF+  F + +   W +    GC+G+         N   L LFL F+++ YK   + +
Sbjct:   30 SVLIGWAVGYLALIYVLRVVVKSRKTPVPLGPIPILHNIVLSVGSLVMFCGCLQASALQIESSKWIWGFKSPWKLVLCFPRGTISAGPVFFWSYIYYLSKFYELIDTVVLVLRKRPLTFLHVFHHVTVIFMSFFWLEYAMSLQIVALLTNTGVHVVMYTYYLLCSIGKPPAWKKLVTNLQILQFVFSFVASMGTLWYHFTGAGCSGMGAWVFNAVFNALLLALFLNFHNRQYKKGVRSE 268          
BLAST of Gcaud1792.t1 vs. uniprot
Match: A0A7S3FGE8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FGE8_9VIRI)

HSP 1 Score: 134 bits (337), Expect = 3.810e-34
Identity = 76/191 (39.79%), Postives = 111/191 (58.12%), Query Frame = 0
Query:   78 MHNIILAIASAYMNVHATRSIILVSKAQTWLATVCTPAQTAVPSPIQATFYLFYLSKFYELLDTFILVMRNKPLSFLHVWHHCTVILSVWGWLEYGVTIGLYGLWFNTFVHVIMYTYFAFSLAGVKMPFKRLITLMQIIQFLTGFASLIPFFWSYIKVGGCTGLPGLAVTGTTNLSYLVLFLRFYSKSYKS 268
            +HN++L++ SA M   A  +       + WL   C P        +    Y++YLSKFYELLDT ++V+ +KPL  LHVWHH  VIL  W WLE+  ++ L  +  NT VHVIMY+Y+  +  G++ P+K+L+T +QI+QF+  FA  +P  W  +  GGC G          N + LVLF  F+ +SYK+
Sbjct:   66 LHNLVLSVGSAVMFAGALSAGYERGLGE-WLF--CLPQGETARGALYFWSYVYYLSKFYELLDTALIVLSDKPLIALHVWHHAVVILMSWLWLEHAQSLQLIAMLTNTGVHVIMYSYYFLTSVGIRPPWKKLVTNIQIVQFVFSFAVSMPLVWMQLNGGGCQGFGAWGFNAAFNATLLVLFWDFHRRSYKA 253          
BLAST of Gcaud1792.t1 vs. uniprot
Match: A0A4P9WMB0_9FUNG (Elongation of fatty acids protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WMB0_9FUNG)

HSP 1 Score: 127 bits (320), Expect = 4.680e-33
Identity = 71/156 (45.51%), Postives = 90/156 (57.69%), Query Frame = 0
Query:  119 VPSPIQATFYLFYLSKFYELLDTFILVMRNKPLSFLHVWHHCTVILSVWGWLEYGVTIGLYGLWFNTFVHVIMYTYFAFSLAGVKMPFKRLITLMQIIQFLTGFASLIPFFWSYIKVGGCTGLPGLAVTGTTNLSYLVLFLRFYSKSYKSSTKIDK 274
            +  P+  T Y++YLSKFYEL DT ILV++ KPL FLH +HH  VIL VW WL+YG+T    G   NT +HV MY Y+  S  G  + FKR +T  QIIQF   F    P+   + K  GC+G      +   N S+L LF+RFY  SY      DK
Sbjct:    1 ISGPLFFTLYIYYLSKFYELFDTVILVLKKKPLIFLHWYHHAIVILMVWSWLQYGITYSSLGTIANTLIHVFMYYYYFVSSLGGNVWFKRYLTFGQIIQFAVSFILCGPYLHYHFK-RGCSGWDAFLFSMAVNGSFLFLFVRFYRSSYGKGKAADK 155          
BLAST of Gcaud1792.t1 vs. uniprot
Match: A0A507DSV1_9FUNG (Elongation of fatty acids protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DSV1_9FUNG)

HSP 1 Score: 128 bits (321), Expect = 6.960e-32
Identity = 75/192 (39.06%), Postives = 108/192 (56.25%), Query Frame = 0
Query:   78 MHNIILAIASAYMNVHATRSIILVSKAQTWLATVCTPAQTAVPSPIQATFYLFYLSKFYELLDTFILVMRNKPLSFLHVWHHCTVILSVWGWLEYGVTIGLYGLWFNTFVHVIMYTYFAFSLAGVKMPFKRLITLMQIIQFLTGFASLIPFFWSYIKVGGCTGLPGLAVTGTTNLSYLVLFLRFYSKSYKSS 269
            +HN+ L +AS ++     R     ++ +      CT   T++  P+    Y++YLSKFYELLDT ILV++ KP+ FLH +HH  VI+ VW WL+YG+   + G   N  VHV MY Y+  +  G  + FKR +T +QI+QF   F   IP+ + Y    GC G P    +   N S+LVLF+ FY  +Y  S
Sbjct:   67 LHNLFLCLASFFIFAGVIRYTYARAQTRGIDEVFCTTDTTSLSGPLTWFLYIYYLSKFYELLDTVILVLKKKPVIFLHWYHHAIVIVMVWSWLQYGIVFSVLGTIANAGVHVFMYYYYFRTSLGGIVWFKRYLTGLQIVQFSASFILSIPYVY-YHLTKGCGGGPAFIFSMAVNASFLVLFINFYKGAYGKS 257          
BLAST of Gcaud1792.t1 vs. uniprot
Match: A9TW15_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TW15_PHYPA)

HSP 1 Score: 127 bits (318), Expect = 3.180e-31
Identity = 80/221 (36.20%), Postives = 116/221 (52.49%), Query Frame = 0
Query:   67 RDDPF-VKHVAIMHNIILAIASAYMNVHATRSIILVSKAQTWLA--------TVCTPAQTAVPSPIQATFYLFYLSKFYELLDTFILVMRNKPLSFLHVWHHCTVILSVWGWLEYGVTIGLYGLWFNTFVHVIMYTYFAFSLAGVKMPFKRLITLMQIIQFLTGFASLIPFFWSYIKVGGCTGLPGLAVTGTTNLSYLVLFLRFYSKSYKSSTKIDKAYEA 278
            RD P  +  + ++HN++L + S  M V    + +   +   WL          +C P  T    P+    Y++YLSKFYELLDT IL+ + +PLSFLHV+HH TVI   + WL+   ++ +  L  NT VHVIMYTY+         P+K+++T +QI+QF+  F   +   W +    GC G+         N S L LFL F+SK Y  S K+ K   A
Sbjct:   60 RDKPVRLGFIPVVHNLVLTVGSLAMFVGCLNATLAEVRQSNWLWGKSSGAEWVLCFPHGTRAVGPVFFWSYVYYLSKFYELLDTVILIFKKRPLSFLHVFHHATVIFMCFFWLQDTQSLQIIALLTNTAVHVIMYTYYFLCSINCPPPWKKVVTNVQIVQFVFSFICGVATLWLHFSGPGCAGMYAFCFNLVFNASLLFLFLNFHSKQYGGS-KVSKGSTA 279          
BLAST of Gcaud1792.t1 vs. uniprot
Match: A0A1Y1IB38_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IB38_KLENI)

HSP 1 Score: 125 bits (314), Expect = 8.330e-31
Identity = 71/168 (42.26%), Postives = 98/168 (58.33%), Query Frame = 0
Query:  107 WLATVCTPAQTAVPSPIQATFYLFYLSKFYELLDTFILVMRNKPLSFLHVWHHCTVILSVWGWLEYGVTIGLYGLWFNTFVHVIMYTYFAFSLAGVKMPFKRLITLMQIIQFLTGFASLIPFFWSYIKVGGCTGLPGLAVTGTTNLSYLVLFLRFYSKSYKSSTKIDK 274
            WL  +C P  T     I    Y++YLSKFYELLDT ILV++ KPLSFLHV+HH  V++  W WL+Y  ++   GL  NT +HVIMY Y+     G   P+++ +T  QI+QFL  F   IPF + ++K   C G        + N + L+LF  F+ + Y S TK+ K
Sbjct:  108 WL--LCFPEDTLPRGRIFFWSYIYYLSKFYELLDTVILVLKKKPLSFLHVYHHSLVVVMCWLWLQYSQSLQTIGLLTNTGIHVIMYWYYFMHSIGHPPPWRKFVTNGQIVQFLFSFTVSIPFVYLHVKES-CAGFYAWLYNASFNFTLLLLFFNFHRRQYSSRTKVAK 272          
BLAST of Gcaud1792.t1 vs. uniprot
Match: A0A1X6NX28_PORUM (Elongation of fatty acids protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NX28_PORUM)

HSP 1 Score: 126 bits (317), Expect = 9.690e-31
Identity = 96/256 (37.50%), Postives = 140/256 (54.69%), Query Frame = 0
Query:   29 RSVSPASAPILSDLRSVLLAIAVYLILLRVIRSQCFALRDDPFV--KHVAIMHNIILAIASAYMNVHATRSIILVSKAQTWLATVCTPAQTAVPSPIQATFYLFYLSKFYELLDTFILVMRNKPLSFLHVWHHCTVILSVWGWLEYGVTIGLYGLWFNTFVHVIMYTYFAFSLAGVKMPFKRLITLMQIIQFLTGFASLIPFFWSYIKVGGCTG-LPGLAVTGTTNLSYLVLFLRFYSKSYKSSTKIDKAYEAKKA 281
            R+ S A AP LS LR     + V  + L VI +    +R  P +  K  A +HNI+L   SA M V     +I+ ++   +++ VC   +TA+   +   FY+FYLSK+YELLDT +LV++ +PLSFLHV+HHC V++  W + +  + I    +  N+ VHV MY Y+  S  GV   +KR IT  QI+QF+    +  PF   Y    GC+G + G         S+  LFL FY +SYK    ++KA  A+ A
Sbjct:   53 RNFSWADAP-LSSLRY---PVGVMFVYLAVIWALHRTMRSRPPIRMKAAAAVHNILLTGLSAAMAVGTIVELIINARRHGFVSVVCDREKTAMTGRLAVWFYVFYLSKYYELLDTVLLVVKKRPLSFLHVYHHCVVLILFWTYNQSRMIISWVLVVANSLVHVAMYGYYTASTFGVPCWWKRYITQAQIVQFVIDLTATWPFPLLYYGARGCSGSMRGWLFGQAVGFSFFHLFLDFYRRSYKKRG-VEKAAGAQPA 303          
The following BLAST results are available for this feature:
BLAST of Gcaud1792.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J7IIQ9_9RHOD2.620e-4643.48Elongation of fatty acids protein n=1 Tax=Cyanidio... [more]
M1UTA5_CYAM15.850e-4442.00Elongation of fatty acids protein n=2 Tax=cellular... [more]
A0A1X6PEF7_PORUM7.820e-4051.43Elongation of fatty acids protein n=1 Tax=Porphyra... [more]
A0A2R6WA11_MARPO1.760e-3434.73Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
A0A7S3FGE8_9VIRI3.810e-3439.79Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A4P9WMB0_9FUNG4.680e-3345.51Elongation of fatty acids protein (Fragment) n=1 T... [more]
A0A507DSV1_9FUNG6.960e-3239.06Elongation of fatty acids protein n=1 Tax=Powellom... [more]
A9TW15_PHYPA3.180e-3136.20Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A1Y1IB38_KLENI8.330e-3142.26Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A1X6NX28_PORUM9.690e-3137.50Elongation of fatty acids protein n=1 Tax=Porphyra... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002076ELO familyPFAMPF01151ELOcoord: 39..271
e-value: 5.6E-53
score: 180.0
IPR002076ELO familyPANTHERPTHR11157FATTY ACID ACYL TRANSFERASE-RELATEDcoord: 38..272
NoneNo IPR availablePANTHERPTHR11157:SF134ELONGATION OF VERY LONG CHAIN FATTY ACIDS PROTEINcoord: 38..272
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 171..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 209..233
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 198..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 239..262
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..170
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 234..238
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 263..282
NoneNo IPR availableTMHMMTMhelixcoord: 241..263
NoneNo IPR availableTMHMMTMhelixcoord: 209..231
NoneNo IPR availableTMHMMTMhelixcoord: 42..59
NoneNo IPR availableTMHMMTMhelixcoord: 180..202
NoneNo IPR availableTMHMMTMhelixcoord: 151..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_472_length_24489_cov_3.453562contigNODE_472_length_24489_cov_3.453562:19302..20150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1792.t1Gcaud1792.t1Gracilaria caudata M_176_S67 malemRNANODE_472_length_24489_cov_3.453562 19302..20150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1792.t1 ID=Gcaud1792.t1|Name=Gcaud1792.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=283bp
MLNRAFEAGWSSATSGTTSVSSFVTRLFRSVSPASAPILSDLRSVLLAIA
VYLILLRVIRSQCFALRDDPFVKHVAIMHNIILAIASAYMNVHATRSIIL
VSKAQTWLATVCTPAQTAVPSPIQATFYLFYLSKFYELLDTFILVMRNKP
LSFLHVWHHCTVILSVWGWLEYGVTIGLYGLWFNTFVHVIMYTYFAFSLA
GVKMPFKRLITLMQIIQFLTGFASLIPFFWSYIKVGGCTGLPGLAVTGTT
NLSYLVLFLRFYSKSYKSSTKIDKAYEAKKAK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002076ELO_fam