Gcaud1707.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1707.t1
Unique NameGcaud1707.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length250
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1707.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 122..158
e-value: 0.0013
score: 28.0
coord: 198..234
e-value: 0.47
score: 19.5
coord: 160..196
e-value: 0.082
score: 22.0
coord: 65..101
e-value: 120.0
score: 4.1
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 123..155
e-value: 1.7E-5
score: 25.3
coord: 71..97
e-value: 0.26
score: 12.1
coord: 198..228
e-value: 0.66
score: 10.8
coord: 161..195
e-value: 0.0032
score: 18.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 44..250
e-value: 1.8E-31
score: 111.2
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 117..245
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 117..245
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 70..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3969_length_2728_cov_4.393629contigNODE_3969_length_2728_cov_4.393629:1268..2017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1707.t1Gcaud1707.t1Gracilaria caudata M_176_S67 malemRNANODE_3969_length_2728_cov_4.393629 1268..2017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1707.t1 ID=Gcaud1707.t1|Name=Gcaud1707.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=250bp
MEVILVSSQSSTYLLPTYADSFGYPAERSSEPGDAVMRAPLPVKEDFRVK
YLILEMAVQYLPRDRDVLNSLAKLLSKGAFGVRRDAVRAKALYERALHED
ERALMSGRIIVSDRTTIEGGHIDAMYNLANLLAAGAPGVPQDAPSAVKLY
ERAIKVGGHPGAMSKLASLLTNGAPGVAVNASRAAELYRRAIEEGGRADA
MYYLANLLTVGAAGVNVNFERAAQYLELSVLQYGNTDAMVALAWLMSSRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf