Gcaud1648.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1648.t1
Unique NameGcaud1648.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length365
Homology
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BLAST of Gcaud1648.t1 vs. uniprot
Match: A0A2V3IUX6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX6_9FLOR)

HSP 1 Score: 540 bits (1391), Expect = 5.890e-191
Identity = 287/367 (78.20%), Postives = 308/367 (83.92%), Query Frame = 0 
Query:    1 MRGISFSAATRPDKHRPTFVQPG-LAAQPPSTASKMMKKLSTTFRRKTNVSPTNILAASNALASRPVVSAPQPATPPKPAPRAITFSAGSSVDAPVSPTLAEPEIPFFDDRQPLRPKS--HAPVVAAVRGKPAWMRDSTAQPPIPGHYPRQMSHQPQLAPEQKPQHGNDPYSRHRHFSFDIGCARPPXXXXXXXXXXXXXXXXXXXXXSRRRWLLPLKQNPDVPKLFDPPAGSNYEKIIRHRDRAEAKILVSACTYLESELDRIGSHLKSTQEQTCCSCKTSASENVDANKPCQCASRALLAATSERLRAVLTMLEDRYDSIEQVYVKSEEYTRAMGKFFQVSPDEFHRILNERDMAKRVDSRKSLR 364
            MRGISFSAA RPDK RP   Q   LA QPPS ASKMMKKLSTTFRRKTNVSPTNILAAS ALA+RP+VSAPQP+TPPKPAPRAITFSAGSSVDAPVSPTLAEP+IPFF DR+P RPKS  + P+VAAVRGKPAWMR      P+  HYPRQMSHQP+L P+QK   G+DPYSRHRHFSFDIG +RPP                     SRRRWLLPL+Q+PD PKLFDPPAGSNYEKIIRHRDRAEAKILVSACTYLESELDRIGSHLK T+++TCC+CK   SEN DANKP QC+SRALLAA SERLRAVL MLE+RYD+IEQVYVKSEEYTRAMGKFFQVSPDEFHRILNERDMAKRVDSRKSLR
Sbjct:    1 MRGISFSAAARPDKTRPLPNQSAPLATQPPSAASKMMKKLSTTFRRKTNVSPTNILAASTALAARPIVSAPQPSTPPKPAPRAITFSAGSSVDAPVSPTLAEPDIPFFGDREPPRPKSGSNPPLVAAVRGKPAWMRHDNNNAPVV-HYPRQMSHQPELPPQQKSAPGDDPYSRHRHFSFDIGQSRPPPAPPAVADKKGAVKPGRRRRPSRRRWLLPLQQSPDTPKLFDPPAGSNYEKIIRHRDRAEAKILVSACTYLESELDRIGSHLKCTRDETCCTCKPVCSENTDANKPGQCSSRALLAAGSERLRAVLRMLEERYDNIEQVYVKSEEYTRAMGKFFQVSPDEFHRILNERDMAKRVDSRKSLR 366
The following BLAST results are available for this feature:
BLAST of Gcaud1648.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUX6_9FLOR5.890e-19178.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_34_length_72082_cov_4.421108contigNODE_34_length_72082_cov_4.421108:23662..24756 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1648.t1Gcaud1648.t1Gracilaria caudata M_176_S67 malemRNANODE_34_length_72082_cov_4.421108 23662..24756 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1648.t1 ID=Gcaud1648.t1|Name=Gcaud1648.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=365bp
MRGISFSAATRPDKHRPTFVQPGLAAQPPSTASKMMKKLSTTFRRKTNVS
PTNILAASNALASRPVVSAPQPATPPKPAPRAITFSAGSSVDAPVSPTLA
EPEIPFFDDRQPLRPKSHAPVVAAVRGKPAWMRDSTAQPPIPGHYPRQMS
HQPQLAPEQKPQHGNDPYSRHRHFSFDIGCARPPPCPPAASDEKRKLAAG
RRRRPSRRRWLLPLKQNPDVPKLFDPPAGSNYEKIIRHRDRAEAKILVSA
CTYLESELDRIGSHLKSTQEQTCCSCKTSASENVDANKPCQCASRALLAA
TSERLRAVLTMLEDRYDSIEQVYVKSEEYTRAMGKFFQVSPDEFHRILNE
RDMAKRVDSRKSLR*
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