Gcaud1647.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1647.t1
Unique NameGcaud1647.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length187
Homology
BLAST of Gcaud1647.t1 vs. uniprot
Match: A0A2V3IUS4_9FLOR (Trafficking protein particle complex subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUS4_9FLOR)

HSP 1 Score: 332 bits (850), Expect = 1.980e-114
Identity = 164/186 (88.17%), Postives = 171/186 (91.94%), Query Frame = 0
Query:    1 MSRPSLQTIGDAAFARCDRVSAELLALTYGTFVRQLLLDYEHVNDVNAQLDTIGYNIGVRLVEDFLAKSKINYCQSFVDTADVIAKVAFKMFLGITANVTSWSADRTTFSLVFDDNPLAEFTELPSNCSDLWYSNVLCGVIRGALEMVNMKVGCSFVRCKLRKDDTNEIRVSLHELLAEQPPQADD 186
            MSRPSLQT+G+AAFARCDRVSAELLALTYGTFVRQLLLDYE V DVNAQLD +G NIGVRLVEDFLAKSKI  C SF  TADVIAKVAFKMFLG+TANVTSWSADR TFSL+FDDNPLAEFTELP  C DLWYSNVLCGVIRGALEM+NMKVGC+FVRCKLR  DTNEIRVSLHELLAEQPPQADD
Sbjct:    1 MSRPSLQTVGEAAFARCDRVSAELLALTYGTFVRQLLLDYEKVADVNAQLDAVGCNIGVRLVEDFLAKSKIAACNSFAHTADVIAKVAFKMFLGVTANVTSWSADRNTFSLLFDDNPLAEFTELPEQCPDLWYSNVLCGVIRGALEMLNMKVGCTFVRCKLRGHDTNEIRVSLHELLAEQPPQADD 186          
BLAST of Gcaud1647.t1 vs. uniprot
Match: R7Q6K9_CHOCR (Trafficking protein particle complex subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6K9_CHOCR)

HSP 1 Score: 282 bits (721), Expect = 8.970e-95
Identity = 135/186 (72.58%), Postives = 158/186 (84.95%), Query Frame = 0
Query:    1 MSRPSLQTIGDAAFARCDRVSAELLALTYGTFVRQLLLDYEHVNDVNAQLDTIGYNIGVRLVEDFLAKSKINYCQSFVDTADVIAKVAFKMFLGITANVTSWSADRTTFSLVFDDNPLAEFTELPSNCSDLWYSNVLCGVIRGALEMVNMKVGCSFVRCKLRKDDTNEIRVSLHELLAEQPPQADD 186
            MSRPSLQ +GDA+FAR + VSAELLALTYG+FVRQL+ DYE  +DVNAQL++IGYN+GVRLV+DFLAKS I++C S   TA+VIAKVAFKMFLG++A V  WS D+ TF +VFDDNPLAEF ELP  C+ LWYSNVLCGVIRGALEMVNMKV C F RC+LR D+ NEIRVSLHE+L EQPP+ +D
Sbjct:    1 MSRPSLQALGDASFARSEHVSAELLALTYGSFVRQLVQDYESPSDVNAQLESIGYNMGVRLVDDFLAKSNISHCSSLAKTAEVIAKVAFKMFLGVSATVGVWSQDKKTFGIVFDDNPLAEFAELPEECAGLWYSNVLCGVIRGALEMVNMKVECRFERCRLRGDECNEIRVSLHEILVEQPPKGED 186          
BLAST of Gcaud1647.t1 vs. uniprot
Match: A0A1X6NLP0_PORUM (Trafficking protein particle complex subunit n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLP0_PORUM)

HSP 1 Score: 257 bits (656), Expect = 7.080e-85
Identity = 128/186 (68.82%), Postives = 149/186 (80.11%), Query Frame = 0
Query:    1 MSRPSLQTIGDAAFARCDRVSAELLALTYGTFVRQLLLDYEHVNDVNAQLDTIGYNIGVRLVEDFLAKSKINYCQSFVDTADVIAKVAFKMFLGITANVTSWSADRTTFSLVFDDNPLAEFTELPSNCSDLWYSNVLCGVIRGALEMVNMKVGCSFVRCKLRKDDTNEIRVSLHELLAEQPPQADD 186
            MS+ SL  +GDAAF R D+VSAELLALTYG+FVRQLL+DYE   +VNAQL  +GYNIGVRLV+DFLAKS    C SF DTAD++AKVAFKMFLG+ A V SWS+DR TFSLVF DNPLAEFTELP     +WYSNVLCGVI+GALEMV M+V   FVRC LR +D NEIRV+L ++L E+PP  D+
Sbjct:    1 MSKASLSKLGDAAFERTDKVSAELLALTYGSFVRQLLIDYEDAEEVNAQLAKMGYNIGVRLVDDFLAKSNAPPCASFADTADIVAKVAFKMFLGVPALVGSWSSDRRTFSLVFTDNPLAEFTELPEKWGGVWYSNVLCGVIKGALEMVQMEVDARFVRCTLRGEDLNEIRVTLLQVLQEKPPVDDE 186          
BLAST of Gcaud1647.t1 vs. uniprot
Match: A0A7S1XF07_9RHOD (Trafficking protein particle complex subunit n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF07_9RHOD)

HSP 1 Score: 249 bits (637), Expect = 5.520e-82
Identity = 117/186 (62.90%), Postives = 148/186 (79.57%), Query Frame = 0
Query:    1 MSRPSLQTIGDAAFARCDRVSAELLALTYGTFVRQLLLDYEHVNDVNAQLDTIGYNIGVRLVEDFLAKSKINYCQSFVDTADVIAKVAFKMFLGITANVTSWSADRTTFSLVFDDNPLAEFTELPSNCSDLWYSNVLCGVIRGALEMVNMKVGCSFVRCKLRKDDTNEIRVSLHELLAEQPPQADD 186
            MS+ SLQ IG+AAFARC+RVSAELL+LTYG+ VRQLL DYE V++VN QLD +GYNIG+RLV+DFL+KS++ +C  F +TA+ I+KV FKM+LG+ A  T+WS D+ +F LVFD+NPL EFTELP     LWYSN+LCGVIRG+L+ V M   C FVRC LR D+ NEIRV+L E+L E+PP  +D
Sbjct:    1 MSKQSLQKIGEAAFARCERVSAELLSLTYGSMVRQLLHDYESVDEVNVQLDKMGYNIGIRLVDDFLSKSRVYHCAGFAETAETISKVGFKMYLGVNAVATNWSEDKKSFGLVFDENPLTEFTELPEAYEGLWYSNILCGVIRGSLQNVQMVCECKFVRCTLRGDEANEIRVTLKEILQEKPPADED 186          
BLAST of Gcaud1647.t1 vs. uniprot
Match: D8S611_SELML (Trafficking protein particle complex subunit n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S611_SELML)

HSP 1 Score: 219 bits (559), Expect = 3.770e-70
Identity = 106/177 (59.89%), Postives = 131/177 (74.01%), Query Frame = 0
Query:   10 GDAAFARCDRVSAELLALTYGTFVRQLLLDYEHVNDVNAQLDTIGYNIGVRLVEDFLAKSKINYCQSFVDTADVIAKVAFKMFLGITANVTSWSADRTTFSLVFDDNPLAEFTELPSNCSDLWYSNVLCGVIRGALEMVNMKVGCSFVRCKLRKDDTNEIRVSLHELLAEQPPQADD 186
            GDAAFA  D V+AEL  LTYG  VRQLL D+E V +VN QLDT+GYNIG+RL++DFL+K+ +  C  F +TADVIAK+ FKMFLG+TA V++W+AD T  SLV DDNPL +F ELP  C  L+Y NVLCGVIRGALEMV+M+    + R  LR DD  E+R+ L E +AE+ P  DD
Sbjct:    7 GDAAFANVDHVNAELFTLTYGAMVRQLLTDFEDVEEVNKQLDTMGYNIGIRLIDDFLSKANVTRCSEFRETADVIAKIGFKMFLGVTATVSNWNADFTECSLVLDDNPLVDFVELPETCQGLYYCNVLCGVIRGALEMVSMRTEVKWARDMLRGDDAYELRLKLIEHVAEEYPYKDD 183          
BLAST of Gcaud1647.t1 vs. uniprot
Match: A0A176VXS5_MARPO (Trafficking protein particle complex subunit n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VXS5_MARPO)

HSP 1 Score: 216 bits (549), Expect = 1.290e-68
Identity = 103/177 (58.19%), Postives = 130/177 (73.45%), Query Frame = 0
Query:   10 GDAAFARCDRVSAELLALTYGTFVRQLLLDYEHVNDVNAQLDTIGYNIGVRLVEDFLAKSKINYCQSFVDTADVIAKVAFKMFLGITANVTSWSADRTTFSLVFDDNPLAEFTELPSNCSDLWYSNVLCGVIRGALEMVNMKVGCSFVRCKLRKDDTNEIRVSLHELLAEQPPQADD 186
            GDA FA  +RV+AEL  LTYG  VRQLL D+E V++VN QLDT+GYNIG+RL++DFLAK+ I  C  F +TA+ IAKV FKMFLG+T +V +W+AD T  SL+ DDNPL +F ELP  C  L+Y N+LCGVIRGALEMV+M+    FV+  LR DD  E+R+ L E + E+ P  DD
Sbjct:    8 GDAVFANVERVNAELFTLTYGAIVRQLLTDFEEVDEVNKQLDTMGYNIGIRLIDDFLAKANITRCSDFRETAETIAKVGFKMFLGVTGSVANWNADGTECSLILDDNPLVDFVELPETCQGLYYCNILCGVIRGALEMVSMRTEVKFVKDILRGDDAYEMRLKLLEQVPEEYPYKDD 184          
BLAST of Gcaud1647.t1 vs. uniprot
Match: A0A388KNM1_CHABU (Trafficking protein particle complex subunit n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KNM1_CHABU)

HSP 1 Score: 212 bits (540), Expect = 3.010e-67
Identity = 104/177 (58.76%), Postives = 127/177 (71.75%), Query Frame = 0
Query:   10 GDAAFARCDRVSAELLALTYGTFVRQLLLDYEHVNDVNAQLDTIGYNIGVRLVEDFLAKSKINYCQSFVDTADVIAKVAFKMFLGITANVTSWSADRTTFSLVFDDNPLAEFTELPSNCSDLWYSNVLCGVIRGALEMVNMKVGCSFVRCKLRKDDTNEIRVSLHELLAEQPPQADD 186
            GDAA+A  ++V+AEL  LTYG  VRQLL D E +N+VN QLDT+GYNIG+RL+++FLAK+ I+ C  F +TADVIAKV  KMFLG+T  V +W+ D T  SL+ DDNPL +F ELP  C  L Y N+LCGVIRGALEMV+MK    FVR  LR D+  EIR+ L E L E  P  DD
Sbjct:    8 GDAAYANIEKVNAELFTLTYGAVVRQLLTDLEDINEVNKQLDTMGYNIGIRLIDEFLAKANISRCTDFKETADVIAKVGLKMFLGVTGTVANWNQDNTECSLILDDNPLVDFVELPETCQGLLYCNILCGVIRGALEMVSMKTEARFVRDVLRGDEAYEIRLKLLEHLPEVLPYKDD 184          
BLAST of Gcaud1647.t1 vs. uniprot
Match: M2WZZ6_GALSU (Trafficking protein particle complex subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WZZ6_GALSU)

HSP 1 Score: 212 bits (540), Expect = 3.660e-67
Identity = 99/179 (55.31%), Postives = 143/179 (79.89%), Query Frame = 0
Query:    9 IGDAAFARCDRVSAELLALTYGTFVRQLLLDYEHVNDVNAQLDTIGYNIGVRLVEDFLAKSKINYCQSFVDTADVIAKVAFKMFLGITANVTSWSADRTTFSLVFDDNPLAEFTELPSNCS-DLWYSNVLCGVIRGALEMVNMKVGCSFVRCKLRKDDTNEIRVSLHELLAEQPPQADD 186
            +GDAA+A+ ++VSA+L+ALTYG+FVR+++ D+E  + VN +L+ +GYNIG+RL+EDFLAKS I+ C SF ++A++I++VAFKMFLGI A V++W+++  + S++FD+NPLAE+ ELP   +  L+YSN+LCGVIRGALEMV + V C FV+ +LR DDTNEI +   E+L EQ P  D+
Sbjct:   12 LGDAAYAKSEKVSADLVALTYGSFVREIIKDFEEPDQVNKELEKLGYNIGIRLIEDFLAKSGISNCSSFEESAEIISRVAFKMFLGIRATVSNWNSEHNSCSIIFDENPLAEYVELPPEYTHSLFYSNLLCGVIRGALEMVQIIVECEFVKDQLRGDDTNEINIRFKEMLQEQVPWNDE 190          
BLAST of Gcaud1647.t1 vs. uniprot
Match: UPI0006449D86 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449D86)

HSP 1 Score: 211 bits (538), Expect = 6.260e-67
Identity = 97/175 (55.43%), Postives = 133/175 (76.00%), Query Frame = 0
Query:    9 IGDAAFARCDRVSAELLALTYGTFVRQLLLDYEHVNDVNAQLDTIGYNIGVRLVEDFLAKSKINYCQSFVDTADVIAKVAFKMFLGITANVTSWSADRTTFSLVFDDNPLAEFTELPSNCSD-LWYSNVLCGVIRGALEMVNMKVGCSFVRCKLRKDDTNEIRVSLHELLAEQPP 182
            +GDAAF++ D++SAEL  LTYG  V QL+ DYE ++ VN +L+ +GYNIGVRL+E+FLAKS I  C  F++TA+VIAKV FKMFLG++A ++ W A++  F L+ DDNPL +F ELP +    L+YSN+LCGV+RGALEMV MKV C+FV+C L  +  +EI+V L E+L++  P
Sbjct:    8 LGDAAFSKVDKISAELFTLTYGALVTQLIKDYEDIDQVNTKLEQMGYNIGVRLIEEFLAKSSIGRCADFIETAEVIAKVGFKMFLGVSAQISDWDAEKKEFHLIIDDNPLVDFVELPEHLKHKLYYSNILCGVMRGALEMVQMKVKCTFVKCALSDESPSEIKVVLEEVLSDLAP 182          
BLAST of Gcaud1647.t1 vs. uniprot
Match: A0A7S4II77_9EUKA (Trafficking protein particle complex subunit n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4II77_9EUKA)

HSP 1 Score: 211 bits (536), Expect = 1.220e-66
Identity = 106/178 (59.55%), Postives = 129/178 (72.47%), Query Frame = 0
Query:   10 GDAAFARCDRVSAELLALTYGTFVRQLLLDYEHVNDVNAQLDTIGYNIGVRLVEDFLAKSKINYCQSFVDTADVIAKVAFKMFLGITANVTSWSADRTTFSLVFDDNPLAEFTELPSNCSDLWYSNVLCGVIRGALEMVNMKVGCSFVRCKLRK-DDTNEIRVSLHELLAEQPPQADD 186
            G+  +AR  ++SAEL  LTYG+ V QLL DY+ V++VN QLD +GYNIGVRL+++FLA++ I  C S   TA++IAKV FKMFLGITANV  WSAD   FSL+ D+NPL EF +LP N S L YSN+LCGVIRGALEM  MKV CSF+   LR  DDT EIRV   E L+E  P  D+
Sbjct:    8 GEQCYARAPKISAELFTLTYGSIVTQLLADYDTVDEVNTQLDQMGYNIGVRLIDEFLAQANITKCSSLKQTAEMIAKVGFKMFLGITANVGKWSADENEFSLILDENPLTEFVDLPENYSGLLYSNMLCGVIRGALEMTQMKVTCSFISDALRPGDDTTEIRVYFKEYLSEAIPINDE 185          
The following BLAST results are available for this feature:
BLAST of Gcaud1647.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUS4_9FLOR1.980e-11488.17Trafficking protein particle complex subunit n=1 T... [more]
R7Q6K9_CHOCR8.970e-9572.58Trafficking protein particle complex subunit n=1 T... [more]
A0A1X6NLP0_PORUM7.080e-8568.82Trafficking protein particle complex subunit n=1 T... [more]
A0A7S1XF07_9RHOD5.520e-8262.90Trafficking protein particle complex subunit n=1 T... [more]
D8S611_SELML3.770e-7059.89Trafficking protein particle complex subunit n=2 T... [more]
A0A176VXS5_MARPO1.290e-6858.19Trafficking protein particle complex subunit n=2 T... [more]
A0A388KNM1_CHABU3.010e-6758.76Trafficking protein particle complex subunit n=1 T... [more]
M2WZZ6_GALSU3.660e-6755.31Trafficking protein particle complex subunit n=1 T... [more]
UPI0006449D866.260e-6755.43hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A7S4II77_9EUKA1.220e-6659.55Trafficking protein particle complex subunit n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007194Transport protein particle (TRAPP) componentPFAMPF04051TRAPPcoord: 26..171
e-value: 5.0E-36
score: 123.7
IPR016721Bet3 familyPIRSFPIRSF018293TRAPP_1_Bet3coord: 3..186
e-value: 7.3E-78
score: 257.9
IPR016721Bet3 familyPANTHERPTHR13048TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3coord: 10..186
IPR016721Bet3 familyCDDcd14942TRAPPC3_bet3coord: 21..175
e-value: 3.16946E-98
score: 279.01
NoneNo IPR availableGENE3D3.30.1380.20Trafficking protein particle complex subunit 3coord: 1..186
e-value: 1.9E-79
score: 267.3
NoneNo IPR availablePANTHERPTHR13048:SF0TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNITcoord: 10..186
IPR024096NO signalling/Golgi transport ligand-binding domain superfamilySUPERFAMILY111126Ligand-binding domain in the NO signalling and Golgi transportcoord: 19..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_34_length_72082_cov_4.421108contigNODE_34_length_72082_cov_4.421108:22547..23171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1647.t1Gcaud1647.t1Gracilaria caudata M_176_S67 malemRNANODE_34_length_72082_cov_4.421108 22547..23171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1647.t1 ID=Gcaud1647.t1|Name=Gcaud1647.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=187bp
MSRPSLQTIGDAAFARCDRVSAELLALTYGTFVRQLLLDYEHVNDVNAQL
DTIGYNIGVRLVEDFLAKSKINYCQSFVDTADVIAKVAFKMFLGITANVT
SWSADRTTFSLVFDDNPLAEFTELPSNCSDLWYSNVLCGVIRGALEMVNM
KVGCSFVRCKLRKDDTNEIRVSLHELLAEQPPQADD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007194TRAPP_component
IPR016721Bet3
IPR024096NO_sig/Golgi_transp_ligand-bd