Gcaud1634.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1634.t1
Unique NameGcaud1634.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length188
Homology
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BLAST of Gcaud1634.t1 vs. uniprot
Match: A0A2V3IGN0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGN0_9FLOR)

HSP 1 Score: 181 bits (458), Expect = 5.120e-55
Identity = 87/110 (79.09%), Postives = 99/110 (90.00%), Query Frame = 0 
Query:   42 MSFDAAHALPQLVNHLIVSCGIGLAGIVGAKATEEVRALTAGDRRADDMTALAVEIDSFRRRRELASSPGDRDWADVTVDRFSNILVVPEPVPELESQDDLNAFDRLLKQ 151
            M+F+AAHALPQLVNHL+VSCGIGLAGIVGAKATEEVRAL+AGD +AD+M  LA+EIDSFRRR ELA+ PGDRDW +VTVDRFSN++V PE VPEL+S DDL AFDRLL Q
Sbjct:    1 MTFEAAHALPQLVNHLVVSCGIGLAGIVGAKATEEVRALSAGDSQADEMATLALEIDSFRRRNELAARPGDRDWTEVTVDRFSNVVVAPELVPELDSYDDLKAFDRLLTQ 110
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BLAST of Gcaud1634.t1 vs. uniprot
Match: R7QP67_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QP67_CHOCR)

HSP 1 Score: 80.9 bits (198), Expect = 1.010e-16
Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 0 
Query:   90 MTALAVEIDSFRRRRELASSPGDRDWADVTVDRFSNILVVPEPVPELESQDDLNAFDRLL 149
            M  LA +IDS RRR+ELA+   +RDW DV VDR++N++V PE VPELES DDL AFD+LL
Sbjct:    1 MDELARDIDSLRRRKELANVSRERDWDDVGVDRYANVVVEPEVVPELESHDDLEAFDKLL 60
The following BLAST results are available for this feature:
BLAST of Gcaud1634.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IGN0_9FLOR5.120e-5579.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QP67_CHOCR1.010e-1663.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_496_length_23667_cov_4.408424contigNODE_496_length_23667_cov_4.408424:16381..17114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1634.t1Gcaud1634.t1Gracilaria caudata M_176_S67 malemRNANODE_496_length_23667_cov_4.408424 16381..17114 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1634.t1 ID=Gcaud1634.t1|Name=Gcaud1634.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=188bp
MASGTKGVWGFVPNAPALQPSQLRLRFCSPHRRPRRPNAARMSFDAAHAL
PQLVNHLIVSCGIGLAGIVGAKATEEVRALTAGDRRADDMTALAVEIDSF
RRRRELASSPGDRDWADVTVDRFSNILVVPEPVPELESQDDLNAFDRLLK
QSTKIILRQADGRCRFRNQIQATPRANLLAVRLSRRH*
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