Gcaud1450.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1450.t1
Unique NameGcaud1450.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length323
Homology
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BLAST of Gcaud1450.t1 vs. uniprot
Match: A0A2V3IRA2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRA2_9FLOR)

HSP 1 Score: 200 bits (509), Expect = 9.310e-59
Identity = 115/307 (37.46%), Postives = 163/307 (53.09%), Query Frame = 0 
Query:    1 MYVVPRRSLKLTILSCEALPPITSDRLWANERVRAEHDTLKRKRDQAERLLRQNADNASDYSDESMLMSFNIGPSALGSPQVALYMEYLRAVGGLQDFHAMYGD-SAASDKKIAPNCYASVTLERNSLAPPLAVTEVKRANYDPFWNCTTEDINIDLMLLCGEMESATYLYCQRLRMAVYHDFGFGQDASSTGWKHDKSRDGLLIGEAFLAVGDLFADPCQKRHELKVYSSDHTLISGCTLHIETQVCCKS--AKVPSAFPYQGAFPTMIPVEIEKD-CGTGESAKNECANNCGGADVALSVCESIS 303
            MY  PRRSL+LTI SCE+LP I +  LW  + +  + + LKR ++ A   L++       Y D        +GP  +      L             F  +YG   AA DK+I+PNCY   TL+R       A T+VKRA + PFWN + +DIN+D M+L    ++A Y  C R +  VYHD G  + AS   W  + +  G LIGEAFL +G++  +PC KRHEL+V+++  T +SGCTLHIET+V CK+  + +       G  P  +PVE++   C    SA     + C GA V  S   ++S
Sbjct:    1 MYAYPRRSLELTIWSCESLPHIKASDLWKEDGIGGKCNELKRAKEDANIKLQE-------YQDRET----RVGPGPMYREHFLLQEAAFNTQDAYDKFVELYGQPGAAQDKEISPNCYVVATLDRGVGGNDFAKTDVKRATHSPFWNMSKKDINLDWMMLYSSKDTAPYTGCDRFKFTVYHDLGLDKKASDREWAVNDTTKGFLIGEAFLTLGEVLCNPCSKRHELQVFNARRTELSGCTLHIETKVVCKTENSSMMGCAAMPGFMPGYVPVEVDNPPC---HSASEISMSACIGAPVVPSAVHAVS 293
The following BLAST results are available for this feature:
BLAST of Gcaud1450.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRA2_9FLOR9.310e-5937.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1295_length_11728_cov_4.118158contigNODE_1295_length_11728_cov_4.118158:587..1744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1450.t1Gcaud1450.t1Gracilaria caudata M_176_S67 malemRNANODE_1295_length_11728_cov_4.118158 587..1744 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1450.t1 ID=Gcaud1450.t1|Name=Gcaud1450.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=323bp
MYVVPRRSLKLTILSCEALPPITSDRLWANERVRAEHDTLKRKRDQAERL
LRQNADNASDYSDESMLMSFNIGPSALGSPQVALYMEYLRAVGGLQDFHA
MYGDSAASDKKIAPNCYASVTLERNSLAPPLAVTEVKRANYDPFWNCTTE
DINIDLMLLCGEMESATYLYCQRLRMAVYHDFGFGQDASSTGWKHDKSRD
GLLIGEAFLAVGDLFADPCQKRHELKVYSSDHTLISGCTLHIETQVCCKS
AKVPSAFPYQGAFPTMIPVEIEKDCGTGESAKNECANNCGGADVALSVCE
SISLPSAVRLAVGSSKGSRKMT*
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