mRNA_F-serratus_M_contig1425.3042.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: H3G9E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9E3_PHYRM) HSP 1 Score: 237 bits (604), Expect = 3.400e-69 Identity = 142/395 (35.95%), Postives = 217/395 (54.94%), Query Frame = 1
Query: 1 RFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGR--LQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVIPVSSGKAPPSKADGPQNDAKIAEMHGI----PYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYGGATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPIDYNIRVHEDNEGAIKMAE 1167
R VAKG+ Q GI + ++ +P + SI +LA A D E +DV+ AFL DV EELY++ PDG+ D N + L++A++G A W+ K + L +GF RS ADP V+ R+ + I+V+YVDDL++ S+TK+ L+ F IK+LGE+ Y LG I R+R+ KT+ ++Q+ Y + + E+FG+ K KA + AD K+ E PYRE VGALM++A+ TRPD+A +AKF ++ HW A + L+YLK T +G+ + GA + + + DA+ A DTR S +G L G A SW S+ Q T+++E+EY +L E +R + M +++DN+G I +A+
Sbjct: 48 RLVAKGYTQRPGIDFTDTFAPVAREESINASLATAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQSNPAMKCLLKQALYGTKQAARQWNSKLNKHLEDQGFRRSDADPCVYVRRSTDE-YSIVVIYVDDLMLFSKTKEHIESIKVALKKEFSIKELGELKYCLGIEIDRNREDKTILMNQRAYIKRLAEKFGVDKC--------KAVHTPADCNSKLVKMTEEEAFVAKYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDMGIVFNGAIKGEPIG-YADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYTSLYSATQEAVRLRLLLKDMGYEDQGATLIYQDNQGCIALAK 432
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE) HSP 1 Score: 248 bits (632), Expect = 7.770e-69 Identity = 140/393 (35.62%), Postives = 231/393 (58.78%), Query Frame = 1
Query: 1 RFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVIPVSSGKAPP---SKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYGGATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPID-YNIRVHEDNEGAIKMAE 1167
R V KG Q KG+ ++E+ SP SSIR LA+ A D + Q+D AFL+ D+TEE+Y+ P+GY++S +V RL+K+++G A +W+ K R L G +S+ DP ++ K K +V + V+VDDLL+ S+ K+ + L F + D+GE + LG I+RDR+ K + +DQ+ Y V RFG+ + P ++ P SK P + + +M IPY+EAVG+L++ + + RPD+A+ +++F PGP HW AV + L+Y+K T+ + Y G T+ +++ + D+D AS D R SV+G ++ G+ SW ++ Q T +T+E+EY+AL+ E ++R + +VPP + +R+ DN+GA+ +A+
Sbjct: 906 RLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQES-GKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYY-KSSQKKMVFVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCN--PAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDG-TKSSEITGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLRGLSEELVPPSERIPLRIFVDNQGALNLAQ 1293
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A6H5KG67_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG67_9PHAE) HSP 1 Score: 237 bits (604), Expect = 1.540e-68 Identity = 140/389 (35.99%), Postives = 227/389 (58.35%), Query Frame = 1
Query: 25 QIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVIPV-SSGKAPPSKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYG-GATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPP-IDYNIRVHEDNEGAIKMAEKRFSS 1182
Q + I + + S+PT SS+RM A+ LD E D++ AF+ A + E++++ +P+G ++ +L K+++G A W + L+A GFE+ AD VFR G+ V+++ V+VDD+ + TK+ Q +DL P+K LGE+ +Y GC+ RDR+A +T+ QQ Y + + ER+G+ IP+ ++ K AD P + P+R VG+L+W+A +TRPD+A + +A++ P HWKA + L Y RT+ G+ + G L +VDAD+AS R SVSGG V+ GGA +WFS+AQ+ T +T+ +E+VA+A++ E+ F+RQ+ FM+P + I ++EDNEGAI++A+ S+
Sbjct: 2 QKEYIDFGDLSAPTVASSSVRMLAALACELDLEFCHSDIDQAFVRAPLKEDIFMRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFRFVEGGEVVLLLEVHVDDIFAVG-TKERCDQFGKDLGEYVPVKSLGELKWYSGCYYERDREAGRLTISQQTYTEELGERYGVEWGGGIPLPTTWKLWDFDADEPSVEH--------PFRALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSILGYAVRTSSFGICFQRGTVSGFTLITFVDADYASRAADRRSVSGGVVMCAGGAIAWFSKAQKCVTLSTTPAEFVAVADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIAKYPISN 381
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048) HSP 1 Score: 246 bits (627), Expect = 2.380e-68 Identity = 144/392 (36.73%), Postives = 228/392 (58.16%), Query Frame = 1
Query: 1 RFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDS-PNQVGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVIPVS-SGKAPPSKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYGGATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFI-RQIKAFMVPPIDYNIRVHEDNEGAIKMAE 1167
R V KGF+Q KGI + E SP +SIR+ L ++A ++ E Q+DV+ AFL + EE+Y+E P+G+ S N V +L+K+++G A W KKF + ++G++++ AD V+ +K V +++YVDD+L++ + + +Q ++L SF +KDLG LG ITRDRK + + L Q++Y + V RF + + + + SK P + +I EM +PY AVG+LM+ TRPD+A+ +++F PG EHW+AV L+YLK T L + YGGA D L + DAD A D+R S SG GGA SW SR Q+ +T+E+EY+A AE E+ ++ R ++ F + +Y +VH D++ A+ +++
Sbjct: 712 RLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGMVASMNLELEQMDVKTAFLHGGLDEEIYMEQPEGFEVSGDNLVCKLKKSLYGLKQAPRQWYKKFDSCMTSQGYKKTSADECVYIQKFSDGNFVALLLYVDDILIVGKDAKKINQLKKELSKSFDMKDLGPAQQILGMQITRDRKNRRLWLSQEKYIERVLARFNMNNAKPVSIPLANHFKLSKRSCPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDIAHAVGKVSRFLSNPGKEHWEAVKWILRYLKGTIKLCLCYGGA--DPILEGYTDADMAGDLDSRKSTSGFIFTFAGGAVSWQSRLQKCVALSTTEAEYIAAAEAGKEMLWLKRYLQEFGIKQKEY--KVHCDSQSALDLSK 1099
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE) HSP 1 Score: 233 bits (594), Expect = 2.440e-68 Identity = 134/384 (34.90%), Postives = 223/384 (58.07%), Query Frame = 1
Query: 25 QIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIR--KTSVIPVSSGKAPPSKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYG-GATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPIDYN-IRVHEDNEGAIKMA 1164
Q I + E +PT + SS+R+ A+ + + D++ AF+++++ E++++ LP G + +L K+++G A W R L+ GF + AD VFR G+ ++IIVV+VDD+ + + ++ + EDL P+K+LGE+ +Y C RD + + + QQR+A+ + +GI ++ +PVS D +N+A +P+RE VG+LMW+A+ TRPD+A +A++ P HWKA + L Y++RT+ +G+T+ G + + +VDAD+AS R SVSGG V+ GGG +WFSR Q+ T +T+E+EYVA+A+++ E+ F+RQ+ FM+P I V EDN+GAI++A
Sbjct: 2 QRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELDEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRHWHSHLTRCLLLLGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERCDKFG-EDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSV-----KLTDFDENEACA----DVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIA 375
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A6H5K307_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K307_9PHAE) HSP 1 Score: 237 bits (604), Expect = 5.480e-68 Identity = 140/397 (35.26%), Postives = 229/397 (57.68%), Query Frame = 1
Query: 1 RFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVIPV-SSGKAPPSKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYG-GATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPP-IDYNIRVHEDNEGAIKMAEKRFSS 1182
R VA+G Q + I + + +PT SS+RM A+ LD E D++ AF+ A + E +++ +P+G ++ +L K+++G A W + L+A GFE+ AD +FR G+ V+++VV+VDD+ + TK+ Q +DL P+K LGE+ +Y GC+ DR+A +T+ QQ Y + + ER+G+ IP+ ++ K AD P + P+R VG+L+W+A +TRPD+A + +A++ P HWKA + L Y RT+ G+++ G L +V AD+AS R S SGG V+ GGA +WFS+ Q+ T +T+++EYVA+A++ E+ F+RQ+ FM+P + I ++EDNEGAI++A+ S+
Sbjct: 173 RLVARGDMQKEYIDFGDLYAPTVASSSVRMLAALACELDLELCHFDIDQAFVRAPLNENIFMRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCLFRFVEGGEVVLLLVVHVDDIFAVG-TKERCDQFGKDLGEYVPVKSLGELKWYSGCYYEGDREAGRMTISQQTYTEELGERYGVEWGGGIPLPTTWKLWDFDADEPSVEH--------PFRALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSFLGYAVRTSSFGISFQRGTVSGFSLITFVYADYASRAADRRSESGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIAKHPISN 560
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS) HSP 1 Score: 231 bits (588), Expect = 5.350e-67 Identity = 133/390 (34.10%), Postives = 223/390 (57.18%), Query Frame = 1
Query: 1 RFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVIPVSSGKAPPSKADGPQNDAKIAEMHGIP-YREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYGGATE-DVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPIDYNIRVHEDNEGAIKMA 1164
R VA+G+ QI G+ Y E+ +P S+ AL + A+ D E Q+DV+ A+L ++ EE+Y+ P+GY D +V RL+K ++G +G W+ +F R+L + GF + +AD V++R G+ + II V+VDDLL+ SET +D + +L + F +KDLGE +G I RDR+ T++L Q++Y + V RFG++ PVS+ P+ + D IA+ + Y+ +G+L++ A TRPD+++ L +F PGPEHW A+ + +YL T L + + E ++ + + DA AS PD R S+SG ++GG + +W S+ Q +++E+EY AL + + R + + + P + + + EDN+ I +A
Sbjct: 38 RLVAQGYSQIPGVDYNETFAPVVRLESVHAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGR-MTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNAR--PVST-LLDPNVILKKRTDDLIADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEEGEIISTGYSDASFASNPDDRKSISGYTYLIGGASFAWSSKKQSTVALSSTEAEYTALTHATRQAIWNRNLLSELGCPQEDSTLIFEDNQSTIALA 423
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A4Y9ZBF0_9AGAM (Uncharacterized protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9ZBF0_9AGAM) HSP 1 Score: 240 bits (613), Expect = 3.160e-66 Identity = 145/395 (36.71%), Postives = 222/395 (56.20%), Query Frame = 1
Query: 1 RFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDS-PNQVGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADP--FVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVI--PVSSGKAPPSKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYGGATEDVKL-SAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPIDYNIRVHEDNEGAIKMAE 1167
R V +GF Q G Y E+ +PTP S++R LA+ A+ D E +D+ AFL D+ EE+YV P+G+ + P V RL K+++G AG W KK L A GF R + + +V++R + +II V++DD+ + S+++ + +DLR+ F +DLG S+ LG ITRDR +T++L Q++Y + ERFG+ + + P++ G S A P+ + AEMH PYR AVGAL ++A+ TR D+A++ LA+FG PG EHWKA+ L+YLK T +TY L +A+ DADH D S SG + +G A SW SR Q I +T+E+EYV+ E+ F+R + ++ + DN+ A+ + +
Sbjct: 735 RLVVQGFSQRPGFDYTETFAPTPRWSALRAVLALAAIEDLELESIDISSAFLNGDLEEEIYVRQPEGFTEKGPEWVWRLLKSLYGLKQAGRCWHKKLNEVLEALGFHRIKCEHSIWVYQRDDVR---IIIPVFIDDMTIASKSQAAIQKVKDDLRAHFKFRDLGPTSWLLGVEITRDRSTRTLSLSQRQYTLDLLERFGMSQCDTVATPLNPGTRLTS-AMSPKTQEESAEMHDKPYRAAVGALQYLATATRCDIAHSVGVLARFGHNPGIEHWKALKHLLRYLKGTLDYKLTYHPDPSGSHLFTAFCDADHGGDLDNGRSTSGFMIRMGTAAISWASRLQTIVALSTTEAEYVSAVAAGQEILFLRNLFTCFGYSLNSPTPLSIDNQSALSVTK 1125
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A4Y9ZKD1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZKD1_9AGAM) HSP 1 Score: 230 bits (587), Expect = 7.800e-66 Identity = 143/404 (35.40%), Postives = 218/404 (53.96%), Query Frame = 1
Query: 1 RFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVIPVSSGKAPP---SKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYGGATEDVKLSAWVDADHASCPD---TRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPIDYNIRVHEDNEGAIKMAEKRFSSRR 1188
R VAKGF Q+ G+ + E+ SP S R+AL + A DWE QLDV+ AFL + EE+Y+E P G+ + + + RL K ++G G W+ F + G++R + ++ R H I+VV+VDD+ V++++K + + +LRS F I +LG +S+ +G + RDR A+TVT+ Q +V +FG++ PVS+ P + AD P +DA AEM IPYRE +G+LM++A +RPD+A+ L++F PG HW +YLK T G+ GG + + LS + DA P R S+SG LG GA SW S+ Q +T +T ESEY A A E ++ I + P + + DN+ AI++ ++ S R
Sbjct: 123 RLVAKGFTQVPGVDFHETYSPVTRLKSQRLALHIGATHDWEMEQLDVKTAFLHGVLEEEVYMEQPPGFAEPGKEDFICRLLKGLYGLKQGGRAWNLLFDSIMQELGYKRLDCEWCIYYRTH-SSGRSIVVVHVDDMNVIADSKAEMARVKSELRSHFDIVELGPVSWLVGLAVARDRVARTVTITQTALVDSVITQFGLQDAH--PVSTPLDPNVHLTHADCPSDDASRAEMSIIPYRELIGSLMYLAIGSRPDIAHAVQHLSQFNANPGHNHWHGAKHVARYLKGTRTHGLVLGGL-QPLALSGFSDASFGGQPGPAGARRSISGFVFTLGSGAISWSSKRQPVTALSTCESEYAAAAHAAREALWLCNILTLLDFPPPGPVPIACDNQSAIRLTHEQSSHCR 522
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A2N9GV19_FAGSY (Integrase catalytic domain-containing protein n=6 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GV19_FAGSY) HSP 1 Score: 233 bits (595), Expect = 2.960e-65 Identity = 142/391 (36.32%), Postives = 219/391 (56.01%), Query Frame = 1
Query: 1 RFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSV--IPVSSGKAPPSKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYGGATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQI--KAFMVPPIDYNIRVHEDNEGAI 1155
R VAKGF Q +G+ Y+E+ SP ++ S R+ +A++A D E Q+DV+ AFL D+TE++Y+ PDG++ S + V +L+K+++G A W KF + + GF+ + D ++ K G ++ +V+YVDD+L+ S + L +F +KDLGE S+ LG I RDR + L Q+ Y V ERF + + PV G SK PQND + EM IPY AVG+LM+ TRPD+A+ L +F PG +HW+A K L+YL+RT +TY ++ +++ + DAD+A C D S SG +L GGA SW S Q +T ++T ++EYVA E + ++R + +V I + ++ DN A+
Sbjct: 344 RLVAKGFSQKEGVDYKETFSPVSSKDSFRIVMALVAHFDLELHQMDVKTAFLNGDLTEDVYMLQPDGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYL-KISGSKIIFLVLYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYISRVLERFNMSTCAAGDAPVVKGDKL-SKLQCPQNDLERNEMKKIPYASAVGSLMYAQVCTRPDIAFAISVLGRFQSDPGMDHWRAAKKVLRYLQRTKDFMLTYR-RSDLLEVVGYADADYAGCADDLKSTSGYVFMLAGGAISWKSVKQTLTASSTMQAEYVACYEATLQAVWLRNFISRLEIVDSISKPLTIYNDNSAAV 731 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1425.3042.1 >prot_F-serratus_M_contig1425.3042.1 ID=prot_F-serratus_M_contig1425.3042.1|Name=mRNA_F-serratus_M_contig1425.3042.1|organism=Fucus serratus male|type=polypeptide|length=368bp MALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQback to top mRNA from alignment at F-serratus_M_contig1425:130822..132164+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1425.3042.1 ID=mRNA_F-serratus_M_contig1425.3042.1|Name=mRNA_F-serratus_M_contig1425.3042.1|organism=Fucus serratus male|type=mRNA|length=1343bp|location=Sequence derived from alignment at F-serratus_M_contig1425:130822..132164+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1425:130822..132164+ >mRNA_F-serratus_M_contig1425.3042.1 ID=mRNA_F-serratus_M_contig1425.3042.1|Name=mRNA_F-serratus_M_contig1425.3042.1|organism=Fucus serratus male|type=CDS|length=2208bp|location=Sequence derived from alignment at F-serratus_M_contig1425:130822..132164+ (Fucus serratus male)back to top |