mRNA_F-serratus_M_contig14.2906.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5KVK4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK4_9PHAE) HSP 1 Score: 201 bits (510), Expect = 3.970e-59 Identity = 91/170 (53.53%), Postives = 122/170 (71.76%), Query Frame = 1
Query: 16 YADVFSSSKLDYGECSTRPFDMKMLPGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA*FISVMRLV 525
Y+DVFS+SK D+G C+ PF + + GT+P+ SRPYR+NPF+ K+VDA+LD Y A LIQHSTSPW+SPLV +PKK G +RITVNY++LN + ++ +PRVD +L +L G VFS+FDL S F Q+ +PLTAFC P L EWLR+P GA +P+ F+ V+ V
Sbjct: 28 YSDVFSTSKTDFGSCNIMPFTLSVPTGTKPVASRPYRINPFMQKKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDDETVPLTAFCTPTQLLEWLRVPQGANASPSWFVKVINRV 197
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5KZ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ53_9PHAE) HSP 1 Score: 194 bits (494), Expect = 7.980e-55 Identity = 89/170 (52.35%), Postives = 120/170 (70.59%), Query Frame = 1
Query: 16 YADVFSSSKLDYGECSTRPFDMKMLPGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA*FISVMRLV 525
Y+DVFS+SK D+G C+ PF + + GT+P+ SR YR+NP + K+VDA+LD Y A LIQHSTSPW+SPLV +PKK G +RITVNY++LN + ++ +PRVD +L +L G VFS+FDL S F Q+ +PLTAFC P L+EWL MP GA +P+ F+ V+ V
Sbjct: 50 YSDVFSTSKTDFGSCNIMPFTLSVPAGTKPVASRLYRINPLMQKKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDDETVPLTAFCTPTQLFEWLCMPQGANASPSWFVKVINRV 219
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE) HSP 1 Score: 204 bits (520), Expect = 1.090e-54 Identity = 97/170 (57.06%), Postives = 127/170 (74.71%), Query Frame = 1
Query: 16 YADVFSSSKLDYGECSTRPFDMKMLPGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA*FISVMRLV 525
Y DVFSSS D+G CS PF + + PG+ P+ SRPYR+NP ++KQVDAILD Y A LIQHSTSP+SSPLV +PKKSGG+RITVNY+KLNK+ + Q+ IPRVD+ L L G ++S+FD+ S F Q+T++ + IPLTAF +GL+EWL+MP G++ AP F V+ V
Sbjct: 243 YHDVFSSSPTDFGSCSLFPFKLTVPPGSAPVTSRPYRVNPPVAKQVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSSAAPGWFCKVVNEV 412
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5K4H4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H4_9PHAE) HSP 1 Score: 203 bits (517), Expect = 2.740e-54 Identity = 94/174 (54.02%), Postives = 127/174 (72.99%), Query Frame = 1
Query: 10 VTYADVFSSSKLDYGECSTRPFDMKMLPGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA*FISVM-RLVN 528
V Y+DVFS+SK D+G C+ PF + + GT+P+ SRPYR+NP + K+VDA+LD Y A LIQHSTSPW+SPLV +PKK G +RITVNY++LN + ++ +PRVD +L +L G VFS+FDL S F Q+ + +PLTAFC P L+EWLRMP GA +P+ F+ V+ RLV+
Sbjct: 855 VEYSDVFSTSKTDFGSCNIMPFTLSVPAGTKPVASRPYRINPLMQKKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVVNRLVH 1028
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5KDT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDT3_9PHAE) HSP 1 Score: 202 bits (514), Expect = 4.600e-54 Identity = 92/172 (53.49%), Postives = 124/172 (72.09%), Query Frame = 1
Query: 10 VTYADVFSSSKLDYGECSTRPFDMKMLPGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA*FISVMRLV 525
V Y+DVFS+SK D+G C+ PF + + GT+P+ SRPYR+NP + K+VDA+LD Y A LIQHSTSPW+SPLV +PKK G +RITVNY++LN + ++ +PRVD +L +L G VFS+FDL S F Q+ + +PLTAFC P L+EWLRMP GA +P+ F+ V+ V
Sbjct: 166 VEYSDVFSTSKTDFGSCTIMPFTLSVPAGTKPVASRPYRINPLMQKKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDAVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRV 337
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5L4V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V5_9PHAE) HSP 1 Score: 198 bits (503), Expect = 9.260e-54 Identity = 90/172 (52.33%), Postives = 123/172 (71.51%), Query Frame = 1
Query: 10 VTYADVFSSSKLDYGECSTRPFDMKMLPGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA*FISVMRLV 525
V Y+DVFS+SK D+G C+ PF + + GT+P+ SRPYR+NP + K+VDA+LD Y A +IQHSTSPW+SPLV + KK G +RITVNY++LN + ++ +PRVD +L +L G VFS+FDL S F Q+ + +PLTAFC P L+EWLRMP GA +P+ F+ V+ V
Sbjct: 26 VEYSDVFSTSKTDFGSCNIMPFTLSVPAGTKPVASRPYRINPLMQKKVDAVLDQYLAAGVIQHSTSPWASPLVVILKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRV 197
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5L323_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L323_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.310e-53 Identity = 91/170 (53.53%), Postives = 122/170 (71.76%), Query Frame = 1
Query: 16 YADVFSSSKLDYGECSTRPFDMKMLPGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA*FISVMRLV 525
Y+DVFS+SK D+G C+ PF + + GT+P+ SRPYR+NP + K+VDA+LD Y A LIQHSTSPW+SPLV +PKK G +RITVNY++LN + ++ +PRVD +L +L G VFS+FDL S F Q+ +PLTAFC P L+EWLRMP GA +P+ F+ V+ V
Sbjct: 681 YSDVFSTSKTDFGSCNIMPFTLSVPAGTKPVASRPYRINPLMQKKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDDETVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRV 850
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5JGS1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS1_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.350e-53 Identity = 92/172 (53.49%), Postives = 124/172 (72.09%), Query Frame = 1
Query: 10 VTYADVFSSSKLDYGECSTRPFDMKMLPGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA*FISVMRLV 525
V Y+DVFS+SK D+G C+ PF + + GT+P+ SRPYR+NP + K+VDA+LD Y A LIQHSTSPW+SPLV +PKK G +RITVNY++LN + ++ A+ RVD +L +L G VFS+FDL S F Q+ + +PLTAFC P L+EWLRMP GA +P+ F+ V+ V
Sbjct: 661 VEYSDVFSTSKTDFGSCTIMPFTLSVPAGTKPVASRPYRINPLMQKKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQALHRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRV 832
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5JK47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK47_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.390e-53 Identity = 91/170 (53.53%), Postives = 122/170 (71.76%), Query Frame = 1
Query: 16 YADVFSSSKLDYGECSTRPFDMKMLPGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA*FISVMRLV 525
Y+DVFS+SK D+G C+ PF + + GT+P+ SRPYR+NP + K+VDA+LD Y A LIQHSTSPW+SPLV +PKK G +RITVNY++LN + ++ +PRVD +L +L G VFS+FDL S F Q+ +PLTAFC P L+EWLRMP GA +P+ F+ V+ V
Sbjct: 728 YSDVFSTSKTDFGSCNIMPFTLSVPAGTKPVASRPYRINPLMQKKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDDETVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRV 897
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5KPN8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN8_9PHAE) HSP 1 Score: 200 bits (509), Expect = 2.970e-53 Identity = 91/172 (52.91%), Postives = 121/172 (70.35%), Query Frame = 1
Query: 10 VTYADVFSSSKLDYGECSTRPFDMKMLPGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA*FISVMRLV 525
V Y+DVFS+SK D+G C+ PF + GT+P+ SRPYR+NP + K VDA+LD Y A LIQHSTSPW+SPLV +PKK G +RITVNY++L + ++ +PRVD +L +L G VFS+FDL S F Q+ + +PLTAFC P L+EWLRMP GA +P+ F+ V+ V
Sbjct: 724 VEYSDVFSTSKTDFGSCTIMPFTLSFPAGTKPVASRPYRINPLMQKNVDAVLDQYLAAGLIQHSTSPWASPLVAIPKKDGSVRITVNYKRLKALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRV 895 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig14.2906.1 >prot_F-serratus_M_contig14.2906.1 ID=prot_F-serratus_M_contig14.2906.1|Name=mRNA_F-serratus_M_contig14.2906.1|organism=Fucus serratus male|type=polypeptide|length=141bp MKMLPGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVback to top mRNA from alignment at F-serratus_M_contig14:1398662..1399821+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig14.2906.1 ID=mRNA_F-serratus_M_contig14.2906.1|Name=mRNA_F-serratus_M_contig14.2906.1|organism=Fucus serratus male|type=mRNA|length=1160bp|location=Sequence derived from alignment at F-serratus_M_contig14:1398662..1399821+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig14:1398662..1399821+ >mRNA_F-serratus_M_contig14.2906.1 ID=mRNA_F-serratus_M_contig14.2906.1|Name=mRNA_F-serratus_M_contig14.2906.1|organism=Fucus serratus male|type=CDS|length=846bp|location=Sequence derived from alignment at F-serratus_M_contig14:1398662..1399821+ (Fucus serratus male)back to top |