prot_F-serratus_M_contig14.2906.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig14.2906.1
Unique Nameprot_F-serratus_M_contig14.2906.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length141
Homology
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5KVK4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK4_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 3.600e-50
Identity = 76/135 (56.30%), Postives = 99/135 (73.33%), Query Frame = 0
Query:    6 GTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA 140
            GT+P+ SRPYR+NPF+ K+VDA+LD Y A  LIQHSTSPW+SPLV +PKK G +RITVNY++LN + ++    +PRVD +L +L  G VFS+FDL S F Q+      +PLTAFC P  L EWLR+P GA  +P+
Sbjct:   54 GTKPVASRPYRINPFMQKKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDDETVPLTAFCTPTQLLEWLRVPQGANASPS 188          
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5JB88_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB88_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 5.530e-50
Identity = 79/133 (59.40%), Postives = 106/133 (79.70%), Query Frame = 0
Query:    7 TQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAP 139
            ++P+ SRPYR++P ++KQVDAILD Y   DLIQHSTSP+SSPLV +PKKSGG+RITVNY+KLNK+  + Q+ I RVDE L  L  G+++S+FD+ S F Q+T++ + IPLTAF   +GL+EWL+MP G+A AP
Sbjct:    8 SEPVTSRPYRVSPPVAKQVDAILDQYLTADLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPILRVDETLDKLLKGNIYSLFDIKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSAAAP 140          
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 2.060e-48
Identity = 81/135 (60.00%), Postives = 107/135 (79.26%), Query Frame = 0
Query:    5 PGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAP 139
            PG+ P+ SRPYR+NP ++KQVDAILD Y A  LIQHSTSP+SSPLV +PKKSGG+RITVNY+KLNK+  + Q+ IPRVD+ L  L  G ++S+FD+ S F Q+T++ + IPLTAF   +GL+EWL+MP G++ AP
Sbjct:  268 PGSAPVTSRPYRVNPPVAKQVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSSAAP 402          
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5JV14_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV14_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 2.460e-48
Identity = 77/135 (57.04%), Postives = 102/135 (75.56%), Query Frame = 0
Query:    5 PGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAP 139
            PG+ P+ SRPY +NP ++KQVDAILD   A  LIQHSTSP+SSPLV +PKKSGG+ ITVNY+KLNK+  + Q+ IPRVD+ L  L  G ++S+FD+ S F Q+T++   I LTAF   +GL+EWL+MP G++ AP
Sbjct:    6 PGSAPVTSRPYHVNPPVAKQVDAILDQCLAAGLIQHSTSPYSSPLVVIPKKSGGVHITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRETIHLTAFVTSSGLFEWLKMPQGSSAAP 140          
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5K9P3_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9P3_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 3.890e-47
Identity = 74/135 (54.81%), Postives = 96/135 (71.11%), Query Frame = 0
Query:    6 GTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA 140
            GT+P+ SRPYR+NP + K+VDA+LD Y A  LIQH TSPW+SPLV V KK G +R TVNY++LN + ++    +PRVD +L +L  G VFS+FDL S F Q+      +PLTAFC P  L+EWLRMP GA  +P+
Sbjct:   10 GTKPVASRPYRINPLMQKKVDAVLDQYLAAGLIQHPTSPWASPLVVVLKKDGSVRTTVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDDETVPLTAFCTPTQLFEWLRMPQGANASPS 144          
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5JJR1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR1_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.040e-46
Identity = 80/135 (59.26%), Postives = 106/135 (78.52%), Query Frame = 0
Query:    5 PGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAP 139
            PG+ P+ SRPYR+NP ++K VDAILD Y A  LIQHSTSP+SSPLV +PKKSGG+RITVNY+KLNK+  + Q+ IPRVD+ L  L  G ++S+FD+ S F Q+T++ + IPLTAF   +GL+EWL+MP G++ AP
Sbjct:   25 PGSAPVTSRPYRVNPPVAKIVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDIKSSFHQITVH-DTIPLTAFVTSSGLFEWLKMPQGSSAAP 158          
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5JZX7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX7_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.360e-46
Identity = 72/135 (53.33%), Postives = 97/135 (71.85%), Query Frame = 0
Query:    6 GTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA 140
            GT+ + SRPYR+NP + K+VDA+LD Y A  LIQHSTSPW+SPLV +PKK G +RITVNY++LN + ++    +PRVD +L +   G VFS+FDL S F Q+    + +PLTA C P  L+EWLR+P GA  +P+
Sbjct:   10 GTKLVASRPYRINPLMQKKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSFYTGKVFSIFDLNSAFHQIVCDEDTVPLTALCTPTQLFEWLRIPQGANASPS 144          
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5L3T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T0_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.550e-46
Identity = 76/135 (56.30%), Postives = 99/135 (73.33%), Query Frame = 0
Query:    6 GTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA 140
            GT+P+ SRPYR+NP + K+VDA+LD Y A  LIQHSTSPW+SPLV +PKK G +RITVNY+ LN + ++    +PRVD +L +L  G VFS+FDL S F Q+    + +PLTAFC P  L+EWLRMP GA  +P+
Sbjct:   10 GTKPVASRPYRINPLMQKKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKCLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPS 144          
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5LRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRK5_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 1.590e-46
Identity = 79/135 (58.52%), Postives = 104/135 (77.04%), Query Frame = 0
Query:    5 PGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAP 139
            PG+ P+ SRPYR NP ++KQVDAILD Y A  LIQHSTSP+SSPLV +PKKSG +RITVNY+KLN++  + Q+ IPRVD  L  L  G ++S+FD+ S F Q+T++ + IPLTAF   +GL+EWL+MP G++ AP
Sbjct:   25 PGSAPVASRPYRANPPVAKQVDAILDQYLAVGLIQHSTSPYSSPLVVMPKKSGSVRITVNYRKLNQLCALIQLPIPRVDYTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSSAAP 159          
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Match: A0A6H5K4H4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H4_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 2.950e-46
Identity = 76/135 (56.30%), Postives = 100/135 (74.07%), Query Frame = 0
Query:    6 GTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLVCVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDLFSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA 140
            GT+P+ SRPYR+NP + K+VDA+LD Y A  LIQHSTSPW+SPLV +PKK G +RITVNY++LN + ++    +PRVD +L +L  G VFS+FDL S F Q+    + +PLTAFC P  L+EWLRMP GA  +P+
Sbjct:  883 GTKPVASRPYRINPLMQKKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPS 1017          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig14.2906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVK4_9PHAE3.600e-5056.30Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JB88_9PHAE5.530e-5059.40Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JUZ4_9PHAE2.060e-4860.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV14_9PHAE2.460e-4857.04Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K9P3_9PHAE3.890e-4754.81Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JJR1_9PHAE1.040e-4659.26Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JZX7_9PHAE1.360e-4653.33Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L3T0_9PHAE1.550e-4656.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LRK5_9PHAE1.590e-4658.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4H4_9PHAE2.950e-4656.30Reverse transcriptase domain-containing protein n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 77..140
e-value: 1.1E-38
score: 134.7
NoneNo IPR availableGENE3D3.10.10.10coord: 2..137
e-value: 1.1E-38
score: 134.7
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 3..121
NoneNo IPR availablePANTHERPTHR24559:SF299coord: 3..121
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig14contigF-serratus_M_contig14:1398740..1399162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig14.2906.1mRNA_F-serratus_M_contig14.2906.1Fucus serratus malemRNAF-serratus_M_contig14 1398662..1399821 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig14.2906.1 ID=prot_F-serratus_M_contig14.2906.1|Name=mRNA_F-serratus_M_contig14.2906.1|organism=Fucus serratus male|type=polypeptide|length=141bp
MKMLPGTQPIQSRPYRLNPFLSKQVDAILDSYFATDLIQHSTSPWSSPLV
CVPKKSGGIRITVNYQKLNKVTEIPQIAIPRVDEVLHTLGGGSVFSVFDL
FSGFPQLTIYPNNIPLTAFCDPNGLYEWLRMPPGAAGAPA*
back to top