mRNA_F-serratus_M_contig1391.2829.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1391.2829.1
Unique NamemRNA_F-serratus_M_contig1391.2829.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1391.2829.1 vs. uniprot
Match: A0A834HDF7_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834HDF7_RHOSS)

HSP 1 Score: 160 bits (405), Expect = 6.070e-43
Identity = 104/256 (40.62%), Postives = 146/256 (57.03%), Query Frame = 1
Query:   10 LTEKQRHRLIEHLLEGSTKGVLGQGAINEAAETFSCSRYQVSGIWKRYQKQRSDGVTDINLRNGRGGHSGRKGI--DVEKLTAALVEVPLKNRTTQRAVAKQLGIPQ*TLQRNLKKLGMRAASRFLKPFLTESGRARRLAWALRWVRDAHTGTGGTGSGQRVFDTMDNVVMVDEKWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVT 771
            LT +QR ++ E LL+ S +G L +G I E A+ FS +   V  IWKR      +GV  +++     G  GRK I  DV K++    EVPL+ RT+ R++AK + +PQ TL R +K+  +R  +  +KP LTE G+  RL +    +  +        +   VF  M N V +DEKWFF+ ++ +RYYL   E  P    + K  I KVMFLAAVARPR +   N  F GKIGIFPFT +  A+R+S++  AGT  T
Sbjct:   18 LTNQQRQQIFEALLKQSERGKLKRGCIPEVAKLFSVNAKSVRRIWKRAVFCMENGVA-VDVSRRLHGRVGRKRIHFDVNKVS----EVPLRRRTSIRSLAKAVTVPQTTLFRRIKEGDIRPHTIAVKPHLTEEGKKARLRFCFSMLEPSSL------ANDPVFKNMYNYVHIDEKWFFLSREVERYYLLPREREPLRTCKSKRFITKVMFLAAVARPRFDAFRNEEFSGKIGIFPFTFKEPAKRSSKNCVAGTLET 262          
BLAST of mRNA_F-serratus_M_contig1391.2829.1 vs. uniprot
Match: A0A1R3HQ96_9ROSI (Transposase, Tc1-like protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3HQ96_9ROSI)

HSP 1 Score: 157 bits (397), Expect = 7.760e-43
Identity = 99/255 (38.82%), Postives = 145/255 (56.86%), Query Frame = 1
Query:    7 NLTEKQRHRLIEHLLEGSTKGVLGQGAINEAAETFSCSRYQVSGIWKRYQKQRSDGVTDINLRNGRGGHSGRKGIDVEKLTAALVEVPLKNRTTQRAVAKQLGIPQ*TLQRNLKKLGMRAASRFLKPFLTESGRARRLAWALRWVRDAHTGTGGTGSGQRVFDTMDNVVMVDEKWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVT 771
            NLT +QR  + E LL+ S  GVL +G++   A  FS S   +  IWK+ +    +G+  +N+ +   G+ GRK I ++    +  E+PL+ RT  R++AK L + + T+ R +K+  +RA S  +KP LT+  +  RL + L  +   + G          FD M N V +DEKWFF+ ++ +RYYL   E+ P    + K  I KVMFLAAVARPR +   N  F GKIGIFPF  +  A+R S++R AGT  T
Sbjct:   17 NLTNQQRQTIYEMLLKQSKDGVLSKGSLTSLATMFSVSPKTIGRIWKQAKLCMENGLI-VNVSSKLTGNVGRKKILIDPRKVS--EIPLRRRTNIRSIAKALNMSKSTVHRRVKEGFIRAHSNAVKPDLTDENKKTRLEFCLSKLDLTNAGINTIP-----FDGMFNQVHIDEKWFFMTRESERYYLLPEEDEPVRTCKSKRFITKVMFLAAVARPRFDESGNVKFSGKIGIFPFVHKEPAKRKSKNRIAGTMET 263          
BLAST of mRNA_F-serratus_M_contig1391.2829.1 vs. uniprot
Match: W2YNB0_PHYPR (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2YNB0_PHYPR)

HSP 1 Score: 157 bits (396), Expect = 8.760e-43
Identity = 102/259 (39.38%), Postives = 147/259 (56.76%), Query Frame = 1
Query:    1 RNNLTEKQRHRLIEHLLEGSTKGVLGQGAINEAAETFSCSRYQVSGIWKRYQKQRSDGVTDINLRNGRGGHSGRKGIDVEKLTAALVE----VPLKNRTTQRAVAKQLGIPQ*TLQRNLKKLGMRAASRFLKPFLTESGRARRLAWALRWVRDAHTGTGGTGSGQRV-FDTMDNVVMVDEKWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGT 762
            R NLT  +R  +I +LL  ST+    QGAI      ++C   Q+S +W+R  K    G   I+  +GR G SGRK     +    L E    +PL++R   R +A  LGI + TL    +    R+ S  +KP LT+  RA R+ +A  +V          G G+R+ F++M + V +DEKWFF+KK  QR+YLG+ EE+P   V++K++I KVMFL AV RPR +    R +DGKIG++PF     A+R S++R AGT
Sbjct:   12 RKNLTPAERAEVIAYLLSVSTELSPPQGAIKACTTKYACGDAQISRLWRRSVKAIQAGAP-IDYESGRKGRSGRKSRLTSEFRVQLNEAIELIPLEDRADIRTLASSLGIAKSTLHDYYQAGAFRSHSAHVKPLLTDKQRAARVEFAAGFVH--------RGFGERLTFNSMMDFVHLDEKWFFLKKDKQRFYLGENEEVPHITVKNKNYIIKVMFLCAVTRPRWDATRLRIWDGKIGLWPFAVYEPAERASKNRPAGT 261          
BLAST of mRNA_F-serratus_M_contig1391.2829.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 159 bits (403), Expect = 1.060e-42
Identity = 98/255 (38.43%), Postives = 144/255 (56.47%), Query Frame = 1
Query:    7 NLTEKQRHRLIEHLLEGSTKGVLGQGAINEAAETFSCSRYQVSGIWKRYQKQRSDGVTDINLRNGRGGHSGRKGIDVEKLTAALVEVPLKNRTTQRAVAKQLGIPQ*TLQRNLKKLGMRAASRFLKPFLTESGRARRLAWALRWVRDAHTGTGGTGSGQRVFDTMDNVVMVDEKWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVT 771
            N T +QRH + E LL+ S  G L +GAI++ A  FS S   VS IW + + Q + G+  + L +      GRK + V+     ++++PL+ R+  R++A  L + + T+ R +K+  +R  +  +KP LT   +  RL + L  +  +        S    F  M NV+ +DEKWF++ K  +RYYL  GE+ P    Q K  I KVMFLAAVARPR +   N  F GKIGI+PFTR   A+R+S++R AGT  T
Sbjct:   12 NTTVEQRHAIYEALLQASFSGELQRGAISDVASQFSVSNRTVSRIWHQAKFQINHGLPVV-LSSNMAKVVGRKRVQVD--FNQVLDIPLRRRSNIRSLANLLNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRS------LSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLET 257          
BLAST of mRNA_F-serratus_M_contig1391.2829.1 vs. uniprot
Match: A0A6A4ZNR1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZNR1_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.230e-42
Identity = 98/255 (38.43%), Postives = 150/255 (58.82%), Query Frame = 1
Query:   10 LTEKQRHRLIEHLLEGSTKGVLGQGAINEAAETFSCSRYQVSGIWKRYQKQRSDGVTDINLRNGRGGHSGRKGI-DVEKLTAALVEVPLKNRTTQRAVAKQLGIPQ*TLQRNLKKLG-MRAASRFLKPFLTESGRARRLAWALRWVRDAHTGTGGTGSGQRVFDTMDNVVMVDEKWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWV 768
            LT  QRHR+ E LLE   +G L +GA+   A+ F C    +S IW R +    +G    +  +   G+SGRK     +++ AA+ +VP ++R T RA+A + GIP+ T+ R++++   ++A S ++KPFLT      RL +AL ++  +        +G   F+ M + V +DEKWF++ K  ++YY+ + EEL     + K  I KVMFLAAVARPR +    + FDGKIG++PF   V A+RNS++R  GT V
Sbjct:   20 LTLAQRHRIYELLLEICVQGELPRGAMLYVAQQFQCDSRTISRIWSRGRASSRNGRGVADFPSKIPGNSGRKRTRSADEIEAAIRQVPQESRQTMRALAFKSGIPRRTIGRHMQETRRLKARSSYIKPFLTPDNIQARLRYALSFLLPS-------SNGSYFFENMYDYVHIDEKWFYLTKVKRKYYVYEDEELAARFCKSKHFITKVMFLAAVARPRYDFHRKQMFDGKIGVWPFVESVPAKRNSKNRPKGTIV 267          
BLAST of mRNA_F-serratus_M_contig1391.2829.1 vs. uniprot
Match: F0WV30_9STRA (Transposase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WV30_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.460e-42
Identity = 97/258 (37.60%), Postives = 142/258 (55.04%), Query Frame = 1
Query:    4 NNLTEKQRHRLIEHLLEGSTKGVLGQGAINEAAETFSCSRYQVSGIWKRYQKQRSDGVTDINLRNGRGGHSGRKGID---VEKLTAALVEVPLKNRTTQRAVAKQLGIPQ*TLQRNLKKLGMRAASRFLKPFLTESGRARRLAWALRWVRDAHTGTGGTGSGQRVFDTMDNVVMVDEKWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWV 768
            N LT +++  L+  LLEGS    L  GA+ EA+E ++ + + V  +WKRY  QR+D  T      G   + GRKG+    ++ L   + ++ L++R   R+++  L IP  TLQR +K   +R  +  LKP L+E   A R+ +   ++     G          F  M + V +DEKWFF+KK  +R YL   E  P    +HKSHI K+MFL AVARPR N+     FDG++G++PF     A+R SR+R AGT V
Sbjct:   45 NRLTVEEKSALVMELLEGSKNSRLQHGALKEASEKWNVNVHTVYRVWKRYCSQRADSATRGITFEGNACNIGRKGVSEEYIKDLHERISKLKLEHRDDLRSLSAALAIPSTTLQRYVKSKVLRVHTVTLKPTLSEDQNAERVRFISSFITLIPRGA--------TFSPMYDRVHLDEKWFFMKKTKRRVYLTPTEPTPYLHTRHKSHIPKIMFLCAVARPRINSCTGEVFDGRLGMWPFANYAPAERASRNREAGTLV 294          
BLAST of mRNA_F-serratus_M_contig1391.2829.1 vs. uniprot
Match: A0A6A4Z4U1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z4U1_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.560e-41
Identity = 97/259 (37.45%), Postives = 149/259 (57.53%), Query Frame = 1
Query:    1 RNNLTEKQRHRLIEHLLEGSTKGVLGQGAINEAAETFSCSRYQVSGIWKRYQKQRSDGVTDINLRNGRGGHSGRKGIDV-EKLTAALVEVPLKNRTTQRAVAKQLGIPQ*TLQRNLKKLG-MRAASRFLKPFLTESGRARRLAWALRWVRDAHTGTGGTGSGQRVFDTMDNVVMVDEKWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVT 771
            R NLT +QR  + E LLE ST G L  GA+++ A  F C    +S +W R +    +G    ++ +   G+ GRK     E++  A+  VP   R T R+VA Q  IP+ T+ R++++   ++A S ++KP LTE     RL +A+ +VR + +GT        +F +M   V VDEKWF++ K  +++Y+   E++    V+ K  I KVMFLAAVARPR ++   + FDGK+G++PF     A+R S++R  GT VT
Sbjct:   25 RENLTAQQRRAIYETLLEQSTDGGLPYGALHDLAVKFRCHWRTISRVWTRGRASLRNGNDVADVASRLQGNVGRKKTRTSEEIEQAIKTVPHFARQTLRSVAHQSNIPKSTIIRHIRETKRLKARSSYVKPLLTEDNLKTRLKFAMNFVRPSASGT-------HIFASMHQYVHVDEKWFYLTKVKRKFYVYDDEDIALRSVKSKQFITKVMFLAAVARPRYDSSKKKFFDGKVGVWPFVEVAPAKRTSKNRPKGTAVT 276          
BLAST of mRNA_F-serratus_M_contig1391.2829.1 vs. uniprot
Match: Q75LI7_ORYSJ (Transposon protein, putative, Mariner sub-class n=5 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q75LI7_ORYSJ)

HSP 1 Score: 159 bits (401), Expect = 1.660e-41
Identity = 103/255 (40.39%), Postives = 147/255 (57.65%), Query Frame = 1
Query:    7 NLTEKQRHRLIEHLLEGSTKGVLGQGAINEAAETFSCSRYQVSGIWKRYQKQRSDGVTDINLRNGRGGHSGRKGIDVEKLTAALVEVPLKNRTTQRAVAKQLGIPQ*TLQRNLKKLGMRAASRFLKPFLTESGRARRLAWALRWVRDAHTGTGGTGSGQRVFDTMDNVVMVDEKWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVT 771
            NLT  QR  + + L++ +  G L + A  E AE F+  R +V  IW+R ++ R+ G+  +N+ + +  +SGRK  +++    A   VPL+ R T R+ A   GIP+ TL R LK+  +R  S  LKP L E  +  RL W +  + D HT        +  F  M N+V +DEKWF   K+ + +YL   E+ P   VQ+K+ I KVMFLAAVARPR N      FDGKIG++PFT++  AQR S++R  GT VT
Sbjct:  140 NLTNIQRQEIYDALVKKTINGRLRKKATTEVAEMFNIKRGRVQDIWRRAKQCRAQGIP-VNVSSRKKTNSGRKKNEIDLSDVA--NVPLQLRGTLRSFASAAGIPKSTLHRMLKEGLIRRHSNTLKPLLKEENKRSRLQWCISML-DWHT-----LPNEPKFVDMRNIVHIDEKWFNTTKKTRTFYLVHWEDDPYRPVQNKNSIDKVMFLAAVARPRYNEEGICTFDGKIGLWPFTKKEPAQRTSQNRPRGTLVT 385          
BLAST of mRNA_F-serratus_M_contig1391.2829.1 vs. uniprot
Match: A0A6P6VMR6_COFAR (uncharacterized protein LOC113724538 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6VMR6_COFAR)

HSP 1 Score: 151 bits (382), Expect = 2.390e-41
Identity = 94/250 (37.60%), Postives = 139/250 (55.60%), Query Frame = 1
Query:   10 LTEKQRHRLIEHLLEGSTKGVLGQGAINEAAETFSCSRYQVSGIWKRYQKQRSDGVTDINLRNGRGGHSGRKGIDVEKLTAALVEVPLKNRTTQRAVAKQLGIPQ*TLQRNLKKLGMRAASRFLKPFLTESGRARRLAWALRWVRDAHTGTGGTGSGQRVFDTMDNVVMVDEKWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAG 759
            LT ++R  + E LL+ S  G L +G I   A  F  S   V  IWK      +DG  D++ R  +    GRK +D++     ++ +PL+ RT  R+++ ++ + + TL R +K+  +R  S  LKP LT+  +  RL + L  +      +  T      F +M NVV +DEKWF++ K+ ++YYL   EE P    + K  I KVMFLAAVARPR +   N  FDGKIGIFPF  +  A+R+S++R AG
Sbjct:   16 LTNQERQMIFEALLQESNGGKLKRGTIRNIASLFKTSVRTVQRIWKLAAITSTDGRVDVSRRFSK--RCGRKRVDID--FTLIMAIPLRRRTNIRSLSSEMKVSKSTLHRRIKEGAIRPHSNALKPQLTDQNKQVRLNFCLSMLEPESLNSNPT------FMSMFNVVHIDEKWFYMTKECKKYYLHPQEEEPLRTCKSKKFIVKVMFLAAVARPRFDCSGNPTFDGKIGIFPFVFKEPAKRSSKNRMAG 255          
BLAST of mRNA_F-serratus_M_contig1391.2829.1 vs. uniprot
Match: UPI00077543C2 (uncharacterized protein LOC107280908 n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=UPI00077543C2)

HSP 1 Score: 157 bits (398), Expect = 2.680e-41
Identity = 98/254 (38.58%), Postives = 147/254 (57.87%), Query Frame = 1
Query:   10 LTEKQRHRLIEHLLEGSTKGVLGQGAINEAAETFSCSRYQVSGIWKRYQKQRSDGVTDINLRNGRGGHSGRKGIDVEKLTAALVEVPLKNRTTQRAVAKQLGIPQ*TLQRNLKKLGMRAASRFLKPFLTESGRARRLAWALRWVRDAHTGTGGTGSGQRVFDTMDNVVMVDEKWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVT 771
            LT  QR  + + LL+ S  G L +      A+ F  S   V  IWKR +     G+T +N+ + + G+SGRK ++++   + +  +P+  R+T R++A+ LG+ + TL R  K+  +R  S  LKP+L E+ +  RL W +  + D HT           F  M+N++ +DEKWF   K+ + +YL  GEE P   V +K+ I KVMFL+AVA+PR +   N  F+GKIGI+PFTR+  AQR SR+R  GT VT
Sbjct:  106 LTNIQRRGIYQLLLQKSKDGKLEKHTTRLVAQEFHVSIRTVQRIWKRAKICHEQGIT-VNVDSRKHGNSGRKKVEID--LSVIAAIPVHQRSTIRSLAQALGVSKSTLHRWFKEGLIRRHSNSLKPYLKEANKKERLRWCVSML-DPHT-----LPNNPKFIEMENIIHIDEKWFNASKKEKTFYLYPGEEEPYFTVHNKNAIDKVMFLSAVAKPRYDDEGNCTFNGKIGIWPFTRKEPAQRRSRNRERGTLVT 350          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1391.2829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A834HDF7_RHOSS6.070e-4340.63Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
A0A1R3HQ96_9ROSI7.760e-4338.82Transposase, Tc1-like protein n=1 Tax=Corchorus ol... [more]
W2YNB0_PHYPR8.760e-4339.38Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
UPI000CD873B31.060e-4238.43uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]
A0A6A4ZNR1_9STRA1.230e-4238.43Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
F0WV30_9STRA3.460e-4237.60Transposase putative n=1 Tax=Albugo laibachii Nc14... [more]
A0A6A4Z4U1_9STRA1.560e-4137.45Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
Q75LI7_ORYSJ1.660e-4140.39Transposon protein, putative, Mariner sub-class n=... [more]
A0A6P6VMR6_COFAR2.390e-4137.60uncharacterized protein LOC113724538 n=2 Tax=Coffe... [more]
UPI00077543C22.680e-4138.58uncharacterized protein LOC107280908 n=1 Tax=Oryza... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1391contigF-serratus_M_contig1391:19732..20502 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score115.5
Seed ortholog evalue1.9e-23
Seed eggNOG ortholog157072.XP_008870373.1
Hectar predicted targeting categorymitochondrion
EggNOG OGs2CMKC@1,2QQNW@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size771
Cds size414
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929371.7440495-CDS-F-serratus_M_contig1391:19731..201451622929371.7440495-CDS-F-serratus_M_contig1391:19731..20145Fucus serratus maleCDSF-serratus_M_contig1391 19732..20145 -
1690962821.1112683-CDS-F-serratus_M_contig1391:19731..201451690962821.1112683-CDS-F-serratus_M_contig1391:19731..20145Fucus serratus maleCDSF-serratus_M_contig1391 19732..20145 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929371.757031-UTR-F-serratus_M_contig1391:20145..205021622929371.757031-UTR-F-serratus_M_contig1391:20145..20502Fucus serratus maleUTRF-serratus_M_contig1391 20146..20502 -
1690962821.1270292-UTR-F-serratus_M_contig1391:20145..205021690962821.1270292-UTR-F-serratus_M_contig1391:20145..20502Fucus serratus maleUTRF-serratus_M_contig1391 20146..20502 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1391.2829.1prot_F-serratus_M_contig1391.2829.1Fucus serratus malepolypeptideF-serratus_M_contig1391 19732..20145 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1391.2829.1

>prot_F-serratus_M_contig1391.2829.1 ID=prot_F-serratus_M_contig1391.2829.1|Name=mRNA_F-serratus_M_contig1391.2829.1|organism=Fucus serratus male|type=polypeptide|length=138bp
MRAASRFLKPFLTESGRARRLAWALRWVRDAHTGTGGTGSGQRVFDTMDN
VVMVDEKWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPR
RNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVT
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mRNA from alignment at F-serratus_M_contig1391:19732..20502-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1391.2829.1 ID=mRNA_F-serratus_M_contig1391.2829.1|Name=mRNA_F-serratus_M_contig1391.2829.1|organism=Fucus serratus male|type=mRNA|length=771bp|location=Sequence derived from alignment at F-serratus_M_contig1391:19732..20502- (Fucus serratus male)
CGAAACAATCTGACCGAAAAACAAAGACATCGTTTGATCGAGCACCTCCT CGAAGGCAGCACCAAGGGGGTCCTGGGTCAGGGCGCCATCAACGAAGCTG CGGAAACTTTCTCGTGCTCCCGCTATCAAGTGAGCGGCATCTGGAAGCGC TACCAGAAGCAGCGCTCCGACGGTGTGACGGACATCAACTTGCGCAACGG CCGTGGTGGGCACTCAGGCCGAAAAGGTATCGATGTGGAGAAACTGACCG CTGCCCTCGTAGAAGTTCCGCTCAAAAACCGAACCACGCAGAGGGCTGTT GCAAAGCAGCTGGGCATTCCTCAATAAACTCTCCAAAGGAACCTGAAGAA GCTTGGTATGCGTGCGGCGTCCCGGTTCCTCAAGCCGTTTCTGACTGAAT CGGGCAGAGCTCGGAGACTGGCTTGGGCGCTACGCTGGGTGCGCGATGCC CATACTGGTACTGGTGGTACCGGTAGTGGTCAGCGTGTGTTCGACACGAT GGACAACGTGGTGATGGTGGACGAGAAATGGTTCTTTATCAAGAAACAGG GCCAGAGGTACTACCTGGGGCAAGGTGAGGAACTACCCACGCACAGAGTT CAGCACAAGTCCCACATCAAGAAGGTCATGTTCCTGGCAGCTGTGGCGCG ACCGCGTAGAAACACTGTGGCGAACCGCAACTTTGACGGCAAGATCGGCA TCTTCCCGTTCACCAGGCAAGTGCAGGCCCAACGAAACAGCAGGCACAGG GCTGCGGGTACGTGGGTGACG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1391:19732..20502-

>mRNA_F-serratus_M_contig1391.2829.1 ID=mRNA_F-serratus_M_contig1391.2829.1|Name=mRNA_F-serratus_M_contig1391.2829.1|organism=Fucus serratus male|type=CDS|length=828bp|location=Sequence derived from alignment at F-serratus_M_contig1391:19732..20502- (Fucus serratus male)
ATGCGTGCGGCGTCCCGGTTCCTCAAGCCGTTTCTGACTGAATCGGGCAG
AGCTCGGAGACTGGCTTGGGCGCTACGCTGGGTGCGCGATGCCCATACTG
GTACTGGTGGTACCGGTAGTGGTCAGCGTGTGTTCGACACGATGGACAAC
GTGGTGATGGTGGACGAGAAATGGTTCTTTATCAAGAAACAGGGCCAGAG
GTACTACCTGGGGCAAGGTGAGGAACTACCCACGCACAGAGTTCAGCACA
AGTCCCACATCAAGAAGGTCATGTTCCTGGCAGCTGTGGCGCGACCGCGT
AGAAACACTGTGGCGAACCGCAACTTTGACGGCAAGATCGGCATCTTCCC
GTTCACCAGGCAAGTGCAGGCCCAACGAAACAGCAGGCACAGGGCTGCGG
GTACGTGGGTGACGATGCGTGCGGCGTCCCGGTTCCTCAAGCCGTTTCTG
ACTGAATCGGGCAGAGCTCGGAGACTGGCTTGGGCGCTACGCTGGGTGCG
CGATGCCCATACTGGTACTGGTGGTACCGGTAGTGGTCAGCGTGTGTTCG
ACACGATGGACAACGTGGTGATGGTGGACGAGAAATGGTTCTTTATCAAG
AAACAGGGCCAGAGGTACTACCTGGGGCAAGGTGAGGAACTACCCACGCA
CAGAGTTCAGCACAAGTCCCACATCAAGAAGGTCATGTTCCTGGCAGCTG
TGGCGCGACCGCGTAGAAACACTGTGGCGAACCGCAACTTTGACGGCAAG
ATCGGCATCTTCCCGTTCACCAGGCAAGTGCAGGCCCAACGAAACAGCAG
GCACAGGGCTGCGGGTACGTGGGTGACG
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