mRNA_F-serratus_M_contig1383.2774.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1383.2774.1
Unique NamemRNA_F-serratus_M_contig1383.2774.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1383.2774.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 1.910e-50
Identity = 104/223 (46.64%), Postives = 132/223 (59.19%), Query Frame = 1
Query:  106 NTAQMCSNGLDGVE-NSDVCCVAECGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGS-------DSICISNGLSGIENDGV-CCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSDVDCDVSGMAPCNIGE-------PS-TCSNGVFGVEAGGA-CCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCII 720
            ++A+ CSNGL+G++ N  VCC   CG CGG+GC + G A GL    CC G ++ ++ YCD++  APCIIGS        +   SNGL GI+ +GV CC   C QCGG+GC +   + GL  S CC G I +S   CD +  APC IG        PS TCSNGV G++  G  CC   CG CGG GC     AAGL AD CC G I  S+ +CD ++ APCII
Sbjct:  188 SSARTCSNGLEGIDANGVVCCPLACGQCGGTGCNTSGAAFGLDGSSCCGGGVKASDEYCDETNEAPCIIGSRPTPSPTSANTCSNGLEGIDGNGVVCCPLGCGQCGGTGCNTSGAAAGLDGSSCCGGSIKASGKYCDETNDAPCIIGSSPAPSPTPSETCSNGVEGIDGNGVVCCPLGCGQCGGAGCTTSGAAAGLGADSCCGGSIKASDEYCDETNEAPCII 410          
BLAST of mRNA_F-serratus_M_contig1383.2774.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 5.900e-42
Identity = 89/208 (42.79%), Postives = 119/208 (57.21%), Query Frame = 1
Query:  118 MCSNGLDGVENSDVCCVAECGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSICISNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSDVDCDVSGMAPCNIGEPSTCSNGVFGVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIIDGPCGPA 741
            +CSNG+ G++  + CC+AECGTCGG GC   G   GL  D+CC   I D    C  +  APC++  D +C SNG+ GI+    CC+AEC  CGG+GC       GL + +CC   I      C V+  APC + +   CSNG+ G++ G ACC+ +CG CGG GC       GL AD+CC+  I +    C  + TAPCI+D   GPA
Sbjct: 2755 VCSNGIPGIQTGNACCLAECGTCGGRGCAEYGG--GLGEDNCCQSEIEDFGELCSVTMEAPCVV--DDVC-SNGIPGIQTGNACCLAECGGCGGTGCAQLGG--GLGADNCCMSEIEDFGELCSVTMEAPCVVDD--VCSNGIPGIQTGNACCLAECGGCGGTGC--AQLGGGLGADNCCMSEIEDFGELCSATMTAPCIVDSVSGPA 2951          
BLAST of mRNA_F-serratus_M_contig1383.2774.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.570e-33
Identity = 85/241 (35.27%), Postives = 119/241 (49.38%), Query Frame = 1
Query:  121 CSNGLDGVENSDVCCVAECGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSICISNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSDVDCDVSGMAPCNIG---------------------------------------EPSTCSNGVFGVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIIDG 726
            CSNG+ G+++ + CC+AECG CGGS C + G   GL AD+CC   I +    C  +  APC +  D +C S+G+ GI +   CC+AEC  CGGSGC  +    GL + +CC G I      C ++  APC +                                         P  CSNG+ G+++G ACC+ +CG CGG+ C       GL AD+CC+  I+     C ++  APC IDG
Sbjct:  747 CSNGMPGIQSGNACCLAECGACGGSDCDAFGG--GLGADNCCESDIVEHGELCSIALEAPCYL--DDVC-SDGIPGIRSGNACCLAECGACGGSGC--DEFGGGLGADNCCEGNIEEHGELCSITLEAPCVVDGRLVADTVPCPSCLMVCLSEHGLTLPPSLFRISSRYSSLPPDMCSNGIPGIQSGSACCLAECGACGGLDC--DEFGGGLGADNCCVSDIVEHGELCSIALEAPCYIDG 978          
BLAST of mRNA_F-serratus_M_contig1383.2774.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 2.770e-31
Identity = 98/243 (40.33%), Postives = 117/243 (48.15%), Query Frame = 1
Query:   88 LLMVVSNTAQMCSNGLDGVENSDVCCVAECGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSICI----------SNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSDVDCDVSGMAPCNI-GEPSTCS------------NGVF---GVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIIDGPCGP 738
            LL   S+     S G DG+   DVCC AECGTCGGSGCGSR    GLTA++CC   I  ANV C   G+APC++  D+             S    G+     CC A C +CGGSGC       GL+ +DCC   I +    C V+G APC + G+ S               +G F   GV  G  CC   C  CGG GC  R    GLT  DCC   I N    C V+  APCI+DG   P
Sbjct:   73 LLEEGSSPTPASSGGCDGILQGDVCCSAECGTCGGSGCGSR---AGLTANECCTSTIAAANVPC---GSAPCVVDGDTSPTXXXXXXXXSGSFTCDGVLKGDYCCSAGCVECGGSGCSDRGG--GLTGADCCTSDISNL---CSVTGAAPCIVDGDTSPTXXXXXXXXXXXXXSGSFTCDGVLKGDYCCSAGCVECGGSGCSDRG--GGLTGADCCTSDISN---LCSVTGAAPCIVDGDTSP 299          
BLAST of mRNA_F-serratus_M_contig1383.2774.1 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 3.710e-31
Identity = 79/220 (35.91%), Postives = 106/220 (48.18%), Query Frame = 1
Query:  109 TAQMCSNGLDGVENSDVCCVAECGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSICISNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSDVDCDVSGMAPCNIGEPST-----------------CSNGVFGVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCI 717
            T  MC  G+ G++ SDVCC A CG+CGG+GC  R    G     CC G +R +  YC  +G APC+  +  +C   G+ GI+   VCC A C  C G+GC       G     CC G + +S   C V+G APC  G   T                 C  G+ G++    CC   CG+CGG GC +R   +G     CC G +  S  +C V+  APC+
Sbjct:   42 TVSMCDGGIVGIQTSDVCCSASCGSCGGTGCSGRDGGSGA----CCGGGVRASGRYCSVTGEAPCM--TVPMC-DGGIVGIQASDVCCSASCGSCAGTGCSGRDGGSGA----CCGGGVQASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSGA----CCGGGVRASGRYCSVTGEAPCM 246          
BLAST of mRNA_F-serratus_M_contig1383.2774.1 vs. uniprot
Match: D7G4E0_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E0_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 8.450e-30
Identity = 82/246 (33.33%), Postives = 112/246 (45.53%), Query Frame = 1
Query:  118 MCSNGLDGVENSDVCCVAECGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGS----------------DSICISNGLSGIENDGVCCVAECPQCGGSGC-----GSEAQSVGLSSSDCCRGPIISSDVDCDVSGMAPCNIGEPST-----------------CSNGVFGVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIIDGPCGPA 741
            MC  G+ G++ SDVCC A CG+CGGSGC  R       ++ CC G +R +  YC  +G APC+ G                 +      G+ GI++  VCC A C  CGGSGC     GSE+         CC G + +S   C ++G APC  G   T                 C  G+ G+++   CC   CG+CGG GC  R   +    + CC G +  S  +C V+  APC+      PA
Sbjct:  157 MCDGGIVGIQTSDVCCSASCGSCGGSGCTGRDGG----SESCCGGGVRASGRYCSITGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQSSDVCCSASCGSCGGSGCTGRDGGSES---------CCGGGVRASGRYCSITGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQSSDVCCSASCGSCGGSGCSGRDGGS----ESCCGGGVRGSGRYCSVTGEAPCMTGAAPTPA 385          
BLAST of mRNA_F-serratus_M_contig1383.2774.1 vs. uniprot
Match: A0A6H5JTV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV1_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 4.440e-28
Identity = 80/227 (35.24%), Postives = 114/227 (50.22%), Query Frame = 1
Query:  118 MCSNGLDGVENSDVCCVAECGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSICISNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSDVDCDVSGMAPCNIGEPST-----------------CSNGVFGVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIIDGPCGPALT 747
            MC   + G+++SDVCC A CG+CGGSGC  R       ++ CC G +R +  YC  +G APC+  +  +C  + + GI++  VCC A C  CGGSGC    +  G S S CC G + +S   C ++G APC  G   T                 C   + G+++   CC   CG+CGG GC  R   +    + CC G +  S  +C ++  APC+     GPA T
Sbjct:    1 MCDGDIVGIQSSDVCCSASCGSCGGSGCTGRDGG----SESCCGGGVRASGRYCSITGEAPCM--TVPMCDGD-IVGIQSSDVCCSASCGSCGGSGC---TERDGGSES-CCGGGVRASGRYCSITGEAPCMTGPAPTPDXXXXXXXXXTVEVPMCDGDIVGIQSSDVCCSASCGSCGGSGCTERDGGS----ESCCGGGVRASGRYCSITGEAPCMT----GPAPT 208          
BLAST of mRNA_F-serratus_M_contig1383.2774.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 4.360e-27
Identity = 81/229 (35.37%), Postives = 102/229 (44.54%), Query Frame = 1
Query:  121 CSNGLDGVENSDVCCVAECGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSICISNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSDVDCDVSGMAPCNIGEPST----------------------------CSNGVFGVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIID 723
            CSNGL G+E   VCC  ECGTCGG+GCGSR    GLT  DCC   I++ N  C  +  APC+I  ++       +G+    +CC A C  CGG+GC       GLS  +CC   I +++  CD    APC +   S                                   GV  G  CC   CGTCGG GCG R        D CC      S   C V+  +PC++D
Sbjct:   24 CSNGLSGLEKGGVCCPVECGTCGGTGCGSR---PGLTKYDCCTSTIKEDNHLCSVTKEAPCVIDEETEADPTCSNGVAKGDICCSAGCGYCGGTGCAGRG---GLSGDECCTSKIAAANKSCDDQ-SAPCVMSGNSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSCGGVAKGAYCCNAGCGTCGGTGCGMR-------GDGCCTSDAALS--LCSVTGMSPCLMD 236          
BLAST of mRNA_F-serratus_M_contig1383.2774.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 2.830e-25
Identity = 66/141 (46.81%), Postives = 81/141 (57.45%), Query Frame = 1
Query:  331 SNGLSGIENDGV-CCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSDVDCDVSGMAPCNIGEP----STCSNGVFGVEAGGA-CCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIIDGPCG 735
            SNGL GIE +GV CC  EC QCGG+GC     + GL S  CC G I +S   CD +  APC IG       TCSNG+ G++  G  CC  +C  CGG GC    +AAGL ++ CC G I  S  +CD ++ APCII    G
Sbjct:  473 SNGLEGIEGNGVVCCPLECNQCGGTGCTMSGSAAGLGSESCCGGGIKASGAYCDDTNEAPCIIGSRPTTVETCSNGLEGIDGNGVVCCPLECNQCGGTGCTTSGSAAGLGSESCCGGGIKASGAYCDDTNEAPCIIGSSSG 613          
BLAST of mRNA_F-serratus_M_contig1383.2774.1 vs. uniprot
Match: D7FJ69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ69_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 3.830e-19
Identity = 57/157 (36.31%), Postives = 77/157 (49.04%), Query Frame = 1
Query:  100 VSNTAQMCSNGLDGVENSDVCCVAECGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDS------------------ICISNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSDVDCDVSGMAPCNI 516
            V+    +CSNG+ GV++   CC+AECG CGGSGC   G   GL   +CC G I +    C     APC++ + +                  +C SNG  GI++   CC+AEC +CGG GCG      GL +  CC   I      C ++  APC I
Sbjct:   28 VTEPTDVCSNGIPGVQSGVSCCLAECGGCGGSGCAELGG--GLGEHNCCEGEIEEFGELCSIKLEAPCVVDASAPAPSPVAEPVAPVTEPTDVC-SNGFPGIQSGVSCCLAECGECGGRGCGEFGG--GLGADKCCESDIEEYGELCSIALAAPCYI 179          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1383.2774.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JC43_9PHAE1.910e-5046.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ68_ECTSI5.900e-4242.79WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JG29_9PHAE1.570e-3335.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWE8_ECTSI2.770e-3140.33Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7G3U7_ECTSI3.710e-3135.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4E0_ECTSI8.450e-3033.33N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5JTV1_9PHAE4.440e-2835.24Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JNF5_9PHAE4.360e-2735.37MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FQV4_ECTSI2.830e-2546.81Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
D7FJ69_ECTSI3.830e-1936.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1383contigF-serratus_M_contig1383:225844..228906 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score171.8
Seed ortholog evalue5.9e-40
Seed eggNOG ortholog2880.D7FJ68
Preferred nameMTPAP
KEGG koko:K08342,ko:K16462,ko:K17478,ko:K18060
KEGG Pathwayko04136,ko04138,ko04140,map04136,map04138,map04140
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.importin-alpha family protein binding
EggNOG OGsCOG0086@1,KOG0260@2759,KOG4725@1,KOG4725@2759
EC2.7.7.19
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01009,ko03029,ko03036,ko03110,ko04131,ko04812
Exons6
Model size1082
Cds size1080
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1383.2774.1prot_F-serratus_M_contig1383.2774.1Fucus serratus malepolypeptideF-serratus_M_contig1383 225845..228906 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929361.904831-CDS-F-serratus_M_contig1383:225844..2260841622929361.904831-CDS-F-serratus_M_contig1383:225844..226084Fucus serratus maleCDSF-serratus_M_contig1383 225845..226084 -
1690962816.418595-CDS-F-serratus_M_contig1383:225844..2260841690962816.418595-CDS-F-serratus_M_contig1383:225844..226084Fucus serratus maleCDSF-serratus_M_contig1383 225845..226084 -
1622929361.9195974-CDS-F-serratus_M_contig1383:226314..2264301622929361.9195974-CDS-F-serratus_M_contig1383:226314..226430Fucus serratus maleCDSF-serratus_M_contig1383 226315..226430 -
1690962816.4315288-CDS-F-serratus_M_contig1383:226314..2264301690962816.4315288-CDS-F-serratus_M_contig1383:226314..226430Fucus serratus maleCDSF-serratus_M_contig1383 226315..226430 -
1622929361.9329393-CDS-F-serratus_M_contig1383:226828..2270291622929361.9329393-CDS-F-serratus_M_contig1383:226828..227029Fucus serratus maleCDSF-serratus_M_contig1383 226829..227029 -
1690962816.4416525-CDS-F-serratus_M_contig1383:226828..2270291690962816.4416525-CDS-F-serratus_M_contig1383:226828..227029Fucus serratus maleCDSF-serratus_M_contig1383 226829..227029 -
1622929361.9453409-CDS-F-serratus_M_contig1383:227613..2278201622929361.9453409-CDS-F-serratus_M_contig1383:227613..227820Fucus serratus maleCDSF-serratus_M_contig1383 227614..227820 -
1690962816.451602-CDS-F-serratus_M_contig1383:227613..2278201690962816.451602-CDS-F-serratus_M_contig1383:227613..227820Fucus serratus maleCDSF-serratus_M_contig1383 227614..227820 -
1622929361.9567153-CDS-F-serratus_M_contig1383:228438..2286421622929361.9567153-CDS-F-serratus_M_contig1383:228438..228642Fucus serratus maleCDSF-serratus_M_contig1383 228439..228642 -
1690962816.4613526-CDS-F-serratus_M_contig1383:228438..2286421690962816.4613526-CDS-F-serratus_M_contig1383:228438..228642Fucus serratus maleCDSF-serratus_M_contig1383 228439..228642 -
1622929361.9725304-CDS-F-serratus_M_contig1383:228794..2289061622929361.9725304-CDS-F-serratus_M_contig1383:228794..228906Fucus serratus maleCDSF-serratus_M_contig1383 228795..228906 -
1690962816.471454-CDS-F-serratus_M_contig1383:228794..2289061690962816.471454-CDS-F-serratus_M_contig1383:228794..228906Fucus serratus maleCDSF-serratus_M_contig1383 228795..228906 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1383.2774.1

>prot_F-serratus_M_contig1383.2774.1 ID=prot_F-serratus_M_contig1383.2774.1|Name=mRNA_F-serratus_M_contig1383.2774.1|organism=Fucus serratus male|type=polypeptide|length=360bp
RVAAQTIRQAEEGFNITMWSTRWLFVLLGLLMVVSNTAQMCSNGLDGVEN
SDVCCVAECGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAP
CIIGSDSICISNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDC
CRGPIISSDVDCDVSGMAPCNIGEPSTCSNGVFGVEAGGACCVTQCGTCG
GVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIIDGPCGPALTI
TLEWSETDSDLDLYVTEPGGSVVSFRSMVGDVGFLDMDVRMGPGIETYSI
FRFLPTDLTINGAYQFQARRFAGPIDTMWTLTASFIDQVDFSTTGDFQTS
ASTDIFTVSV
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mRNA from alignment at F-serratus_M_contig1383:225844..228906-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1383.2774.1 ID=mRNA_F-serratus_M_contig1383.2774.1|Name=mRNA_F-serratus_M_contig1383.2774.1|organism=Fucus serratus male|type=mRNA|length=3063bp|location=Sequence derived from alignment at F-serratus_M_contig1383:225844..228906- (Fucus serratus male)
AGGGTTGCAGCGCAAACCATCCGACAAGCAGAAGAGGGCTTCAATATTAC CATGTGGTCTACGCGATGGCTCTTTGTCCTTTTAGGGCTTCTGATGGTTG TCTCTAACACCGGTGAGTCTGCACCAAGAATCTAAGACAGTTTTATCTAC TGTAGAACTTACGTTGATTTGTTGTGCGTCTGAAGTCACCGCATTCCACA AGCACCGTCGTTGATTTTTCTCCCGGATTCCCTAACGTTTATCACGGTGG TATCGGACAAGCAGCTCAGATGTGCAGCAATGGACTCGACGGCGTCGAGA ATTCCGACGTGTGCTGCGTGGCTGAGTGCGGCACGTGTGGTGGCTCGGGC TGCGGAAGCCGGGGCCAGGCTGTCGGCCTAACTGCGGATGACTGTTGTGT TGGACGCATCAGGGATGCAAACGTTTATTGCGACGACTCCGGGGCCGCGC CTTGCATCATCGGCAGTGGTGAGGGGTTTGGACAGAGTTGGTTGATAGCG ACATCCTTCATCACAAGAGACGCATTTTACATATTCCATGACCATCATAA TAGATAACGTGCTGCGATCTATCATACCGATCCAGGCACCGTGTGGTCAA TGGTCGACGCTCAGTGGGGTAGTTAAAGCTCTGTTAAAACAAGGCCATTG AATGTGCGCCACCACTAGAAAATCCCACTTGCTCGTCCTTACTGTCTATC GCATGGGAACCTTCTCTCAAAAACGTAGTGCGAGATAACTTGTTGGCCTG CTTGGTAATAGAGCTACTGCCCTAGCCACATAAGTTGGCTTGCTTCAGGC CTAGCATCAAAGGTCTCACCCGAACATTTCCCGTTTAGCGTTTTTGTACA AGGCATACTCAATCCGACTAATAATGAAGACGGGACGAACTATAGCCAGT CTACTACTAAGTACTGCACCTTGAACGTTGTGAAGCTACATATTAATCGA TCGAAAACTTGGAACGGGAGCGATTTTGCGCAATTACACCATCATCGTGC TTTTGGTGCTGCCAATTCAAGTGTTACGTGTATTTGGTAACTTATTTCCT TTTGCTGGTCTGCTTCTTTGCTCCCCGATCCATCAGATTCGATATGCATT AGCAACGGCCTCTCCGGCATCGAGAATGACGGAGTATGTTGTGTGGCTGA GTGCCCACAATGCGGCGGCTCGGGCTGCGGATCTGAGGCCCAAAGCGTCG GCCTTTCATCCAGTGACTGCTGTAGGGGACCCATCATATCCTCTGACGTG GACTGTGATGTATCCGGGATGGCCCCCTGCAACATTGGCGAACGTGTGTG CTTTGCTCATAGCTCGACATGACAATTTTCAAGTCTTGCCCCGATGTGTA ATGGAGCATGGCGATAGGCATTGCGGGTCCAGGCACCGTGTGGGTCGGTG TTTACCTCTCGGGTGGAGCGCTAATTTTGTAGCGAAAGTGAAAAAGACGT TACTCGAGAATACGATGTGCTTTTATTTTTATTCTCTCGCATGCCCCCCC CCCTCCCCAGCCCTTAATCCAGCGCAGTGTCAGGCATGTCATAGACCGGC TGAGGGTAAAGTACTCCATTGACACGAAGTTGGTGTTTTTGTCGGAAAGT GCCCCGAAATGCGTTTCTGCGTTCCTTCGGAGTGGAAAGTCTGGTTGACG GTTAGGATAGACCCACTGCTCAACCTGCAGGGTACTTTTTTCAGCTAAGG TCTGCTACTGAAATATCTAAATGGACGTGGGTATTCACGTTTTTTTCATC AGAGGGCGAACTCTTTTGGCATTCCCTCGGCAAGGGCTGAGTATGGCTCC TTGGCCCCGCAGCCCGCGCATTCTGCAGAGAGATAGACACCCATCGTGTT TGCTCCACCTCTGTTGCTCATCACCAGCTTCAACTTGCAGCAACGGTGTC TTTGGCGTCGAGGCTGGTGGCGCCTGCTGCGTGACTCAGTGCGGGACGTG TGGTGGTGTGGGCTGCGGCGCTAGGGCCACGGCTGCCGGGCTTACGGCGG ACGACTGCTGTATTGGACGCATCCTGAATTCGAATGTGTTCTGCGACGTT TCAGACACAGCACCGTGCATCATCGATGGTGAGCGTTTTGGGCTCGTTCT TCTTATATCAACGGGTTGGAACATCGCAAGAGGCACTCTTTACTTCATAG CCCTGCTGTTGACGACGCGTTTCGATCGACCATACCGATCTGGGCGCTGG GCTGCTATTGAATTTACGTGTAGCACAAAGCAGTGTCGCTACCGACAAGT GTTTCGTTGACGTCGTCGCTGAAAACACATCTCTTCTTTACATCTGAATA TACTCTTTGGCCAACAGTTTGACAAACGGACCAGGCGACCCTTGCTCACC CCCCCCCCAAGGTTATCTTGACCAAATTATCAGAGGCAAGTTGCATAGTG CGTGCAACATATAGAGTACAATATGCAAGGTATCTCACTTTTACCACCCT GATGTCATTTGTGTGCGGCTTCGCAGGACCGTGCGGGCCTGCGCTCACCA TCACCTTGGAATGGTCAGAGACCGACAGCGATCTCGATCTCTACGTGACG GAGCCCGGTGGCTCGGTTGTCAGTTTTAGGAGCATGGTGGGGGTAAGTGC ACAATTCAATAGCGCCTGTCTGAGGCGTGTTCGGCTTTATTAGGGGTAGC CGCCGCTATCTCGACTCTCTCGGAGCAGAAGTATTTAAGGAGTGGAGTCC TCAGGCTGTGACTGAAAAAAATAAGTCAATAACCTTGAATGGCCTCCATA GTCGACGCTGACCCCTCATCTTCGCCTCGTGTTGTTATATAACGCTCCAT CCTGATCGCCCTCTGCTTCAAGGACGTTGGATTCCTCGACATGGACGTCA GAATGGGTCCCGGCATAGAAACCTACTCCATCTTTCGCTTCCTTCCTACC GACCTCACTATAAACGGGGCATACCAGTTCCAGGCAAGGCGCTTTGCCGG TCCCATCGATACGATGTGGACTCTTACCGCTAGCTTTATCGATCAAGTTG ACTTTTCCACTACTGGTGACTTCCAGACGTCCGCTTCTACCGACATCTTC ACCGTTTCTGTCA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1383:225844..228906-

>mRNA_F-serratus_M_contig1383.2774.1 ID=mRNA_F-serratus_M_contig1383.2774.1|Name=mRNA_F-serratus_M_contig1383.2774.1|organism=Fucus serratus male|type=CDS|length=2160bp|location=Sequence derived from alignment at F-serratus_M_contig1383:225844..228906- (Fucus serratus male)
AGGGTTGCAGCGCAAACCATCCGACAAGCAGAAGAGGGCTTCAATATTAC
CATGTGGTCTACGCGATGGCTCTTTGTCCTTTTAGGGCTTCTGATGGTTG
TCTCTAACACCGAGGGTTGCAGCGCAAACCATCCGACAAGCAGAAGAGGG
CTTCAATATTACCATGTGGTCTACGCGATGGCTCTTTGTCCTTTTAGGGC
TTCTGATGGTTGTCTCTAACACCGCTCAGATGTGCAGCAATGGACTCGAC
GGCGTCGAGAATTCCGACGTGTGCTGCGTGGCTGAGTGCGGCACGTGTGG
TGGCTCGGGCTGCGGAAGCCGGGGCCAGGCTGTCGGCCTAACTGCGGATG
ACTGTTGTGTTGGACGCATCAGGGATGCAAACGTTTATTGCGACGACTCC
GGGGCCGCGCCTTGCATCATCGGCAGTGCTCAGATGTGCAGCAATGGACT
CGACGGCGTCGAGAATTCCGACGTGTGCTGCGTGGCTGAGTGCGGCACGT
GTGGTGGCTCGGGCTGCGGAAGCCGGGGCCAGGCTGTCGGCCTAACTGCG
GATGACTGTTGTGTTGGACGCATCAGGGATGCAAACGTTTATTGCGACGA
CTCCGGGGCCGCGCCTTGCATCATCGGCAGTGATTCGATATGCATTAGCA
ACGGCCTCTCCGGCATCGAGAATGACGGAGTATGTTGTGTGGCTGAGTGC
CCACAATGCGGCGGCTCGGGCTGCGGATCTGAGGCCCAAAGCGTCGGCCT
TTCATCCAGTGACTGCTGTAGGGGACCCATCATATCCTCTGACGTGGACT
GTGATGTATCCGGGATGGCCCCCTGCAACATTGGCGAACATTCGATATGC
ATTAGCAACGGCCTCTCCGGCATCGAGAATGACGGAGTATGTTGTGTGGC
TGAGTGCCCACAATGCGGCGGCTCGGGCTGCGGATCTGAGGCCCAAAGCG
TCGGCCTTTCATCCAGTGACTGCTGTAGGGGACCCATCATATCCTCTGAC
GTGGACTGTGATGTATCCGGGATGGCCCCCTGCAACATTGGCGAACCTTC
AACTTGCAGCAACGGTGTCTTTGGCGTCGAGGCTGGTGGCGCCTGCTGCG
TGACTCAGTGCGGGACGTGTGGTGGTGTGGGCTGCGGCGCTAGGGCCACG
GCTGCCGGGCTTACGGCGGACGACTGCTGTATTGGACGCATCCTGAATTC
GAATGTGTTCTGCGACGTTTCAGACACAGCACCGTGCATCATCGATGCTT
CAACTTGCAGCAACGGTGTCTTTGGCGTCGAGGCTGGTGGCGCCTGCTGC
GTGACTCAGTGCGGGACGTGTGGTGGTGTGGGCTGCGGCGCTAGGGCCAC
GGCTGCCGGGCTTACGGCGGACGACTGCTGTATTGGACGCATCCTGAATT
CGAATGTGTTCTGCGACGTTTCAGACACAGCACCGTGCATCATCGATGGA
CCGTGCGGGCCTGCGCTCACCATCACCTTGGAATGGTCAGAGACCGACAG
CGATCTCGATCTCTACGTGACGGAGCCCGGTGGCTCGGTTGTCAGTTTTA
GGAGCATGGTGGGGGACCGTGCGGGCCTGCGCTCACCATCACCTTGGAAT
GGTCAGAGACCGACAGCGATCTCGATCTCTACGTGACGGAGCCCGGTGGC
TCGGTTGTCAGTTTTAGGAGCATGGTGGGGGACGTTGGATTCCTCGACAT
GGACGTCAGAATGGGTCCCGGCATAGAAACCTACTCCATCTTTCGCTTCC
TTCCTACCGACCTCACTATAAACGGGGCATACCAGTTCCAGGCAAGGCGC
TTTGCCGGTCCCATCGATACGATGTGGACTCTTACCGCTAGCTTTATCGA
TCAAGTTGACTTTTCCACTACTGGTGACTTCCAGACGTCCGCTTCTACCG
ACATCTTCACCGTTTCTGTCGACGTTGGATTCCTCGACATGGACGTCAGA
ATGGGTCCCGGCATAGAAACCTACTCCATCTTTCGCTTCCTTCCTACCGA
CCTCACTATAAACGGGGCATACCAGTTCCAGGCAAGGCGCTTTGCCGGTC
CCATCGATACGATGTGGACTCTTACCGCTAGCTTTATCGATCAAGTTGAC
TTTTCCACTACTGGTGACTTCCAGACGTCCGCTTCTACCGACATCTTCAC
CGTTTCTGTC
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