prot_F-serratus_M_contig138.2757.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig138.2757.1
Unique Nameprot_F-serratus_M_contig138.2757.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length310
Homology
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BLAST of mRNA_F-serratus_M_contig138.2757.1 vs. uniprot
Match: A0A6H5JJN5_9PHAE (USP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJN5_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.800e-12
Identity = 45/78 (57.69%), Postives = 60/78 (76.92%), Query Frame = 0 
Query:  183 LQRVAFQKELQAGLSQNQAAVESKDKWSRSASFWDRSLDMGKLKKVKDK----DATAPKLGENAFQAKQEELHSKSRR 256
            L R+A  KELQ+GLS+ QAA E KD  SR++SFWDRSLDMGK+KKVK+K    + +A   G+ AFQAKQE++H +++R
Sbjct: 1150 LHRLASAKELQSGLSRKQAAEEHKDNISRASSFWDRSLDMGKVKKVKEKKDPQEMSASSSGD-AFQAKQEQMHGQAKR 1226
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig138.2757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJN5_9PHAE2.800e-1257.69USP domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig138contigF-serratus_M_contig138:714252..716438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig138.2757.1mRNA_F-serratus_M_contig138.2757.1Fucus serratus malemRNAF-serratus_M_contig138 714170..716643 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig138.2757.1 ID=prot_F-serratus_M_contig138.2757.1|Name=mRNA_F-serratus_M_contig138.2757.1|organism=Fucus serratus male|type=polypeptide|length=310bp
MADSSNEGKPATPQCYNNEKGSVEKEAKGSREGVSTQGEMGKRASSPVCA
RDPVQVSKRRKLKNENKGSAANASGREGAFSLKGGGEATGDSPSGVARAS
SAADAVGGEGTTRNDNGGKGGGSSSISSLDKSSETCEVTGKRVVVPWRPT
KKKSKELFAQKIDSWMDGDQDKDDSLAMDGEDLQRVAFQKELQAGLSQNQ
AAVESKDKWSRSASFWDRSLDMGKLKKVKDKDATAPKLGENAFQAKQEEL
HSKSRRGHPEAVPHKMVPTNDENRRVSSGEGQKRNRGGSGGELKMGRGGG
KARGKKARQ*
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