prot_F-serratus_M_contig102.270.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig102.270.1
Unique Nameprot_F-serratus_M_contig102.270.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length138
Homology
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A2R4QQ84_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ84_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 1.420e-68
Identity = 116/134 (86.57%), Postives = 120/134 (89.55%), Query Frame = 0
Query:    1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 134
            VI +VGYAT+S ASHFAYWLGS  AFCTAFY I+LLSLC LVEPNGSRSLLLSASEG WAIGLVLGLLA PSMFVGY SRDLFIGLG DFWGNSLFC  FNLSIIDA+FMSTSTK MPLLLSMLGGFL FILYR
Sbjct:  404 VILEVGYATYSTASHFAYWLGSFAAFCTAFYSIRLLSLCFLVEPNGSRSLLLSASEGSWAIGLVLGLLAIPSMFVGYLSRDLFIGLGTDFWGNSLFCLPFNLSIIDAEFMSTSTKIMPLLLSMLGGFLSFILYR 537          
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A8D5Z4B2_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Punctaria TaxID=27943 RepID=A0A8D5Z4B2_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 7.220e-62
Identity = 97/134 (72.39%), Postives = 112/134 (83.58%), Query Frame = 0
Query:    1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 134
            VI +VGYAT+S  SHFAYWLGS  AFCTAFY I+LL+LC L EPNGSRSL+LSASEG W +G+VLG+LA PSMF+GYFSRDLFIGLG DFWGN+LFC   NLSIIDA+FMSTS K +PL  S++GG   FILY+
Sbjct:   14 VILEVGYATYSSGSHFAYWLGSVAAFCTAFYSIRLLALCFLSEPNGSRSLILSASEGSWPMGVVLGILAIPSMFIGYFSRDLFIGLGTDFWGNALFCLPVNLSIIDAEFMSTSIKILPLCFSIIGGLSSFILYK 147          
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A1Z4F5P8_9PHAE (NADH-ubiquinone oxidoreductase chain 5 (Fragment) n=2 Tax=Lessonia variegata TaxID=549686 RepID=A0A1Z4F5P8_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 4.470e-61
Identity = 98/134 (73.13%), Postives = 111/134 (82.84%), Query Frame = 0
Query:    1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 134
            VI +VGYAT+S ASHFAYW+GS  AFCTAFY I+LLSLC L EPNGSRSLLLSASEG WA+G+VLG+LA PSMF+GY SRDLFIGLG DFWGN+LFC   NLSIIDA+FMST  K  PL  S++GG   FILY+
Sbjct:    5 VILEVGYATYSNASHFAYWVGSLAAFCTAFYSIRLLSLCFLSEPNGSRSLLLSASEGGWAMGVVLGILALPSMFIGYLSRDLFIGLGTDFWGNALFCIPTNLSIIDAEFMSTDIKIFPLCCSIIGGVTSFILYK 138          
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A1Z4F5K4_SACJA (NADH-ubiquinone oxidoreductase chain 5 (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A1Z4F5K4_SACJA)

HSP 1 Score: 194 bits (492), Expect = 8.870e-60
Identity = 96/133 (72.18%), Postives = 108/133 (81.20%), Query Frame = 0
Query:    2 ISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 134
            I +VGYAT+S ASHFAYWLGS  AFCTAFY I+LL+LC L EPNGSRSLLLSASEG W +GLVLG+LA PSMF+GY  RDLFIGLG DFWGN+LFC   NLSIIDA+FMST  K +PL  S++GG   FILY 
Sbjct:    1 ILEVGYATYSNASHFAYWLGSLAAFCTAFYSIRLLALCFLSEPNGSRSLLLSASEGGWPMGLVLGILALPSMFIGYLGRDLFIGLGTDFWGNALFCMPSNLSIIDAEFMSTDIKLLPLCCSIIGGLASFILYN 133          
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A1Z4F5M6_COSCS (NADH-ubiquinone oxidoreductase chain 5 (Fragment) n=12 Tax=Laminariales TaxID=2886 RepID=A0A1Z4F5M6_COSCS)

HSP 1 Score: 194 bits (492), Expect = 1.390e-59
Identity = 96/134 (71.64%), Postives = 109/134 (81.34%), Query Frame = 0
Query:    1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 134
            VI +VGYAT+S ASHFAYWLGS  AFCTAFY I+LL+LC L EPNGSRSLLLSA+EG W IGLVLG+LA PSMF+GY  RDLFIGLG DFWGN+LFC   NLS+IDA+FM+T  K  PL  S+ GG + FILYR
Sbjct:   15 VILEVGYATYSNASHFAYWLGSLAAFCTAFYSIRLLALCFLSEPNGSRSLLLSAAEGGWPIGLVLGILALPSMFIGYLGRDLFIGLGTDFWGNALFCMPANLSLIDAEFMATDIKIFPLCCSIAGGVVSFILYR 148          
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A8F0K255_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Laminariales TaxID=2886 RepID=A0A8F0K255_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 1.610e-59
Identity = 98/134 (73.13%), Postives = 113/134 (84.33%), Query Frame = 0
Query:    1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 134
            VI +VGYAT+S ASHFAYWLGS  AFCTAFY I+LL+LC L EPNGSRSLLLSASEG W +G+VLG+LA PSMF+GYFSRDLFIGLG DFWGN+LFC   NLSI+DA+FMST  K  PL  S+LGGF+ F++YR
Sbjct:  404 VILEVGYATYSNASHFAYWLGSLAAFCTAFYSIRLLALCFLAEPNGSRSLLLSASEGSWPMGVVLGILAIPSMFIGYFSRDLFIGLGTDFWGNALFCLPVNLSIVDAEFMSTGIKIFPLCCSVLGGFISFVVYR 537          
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A8D6C180_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Punctaria TaxID=27943 RepID=A0A8D6C180_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 3.170e-58
Identity = 95/134 (70.90%), Postives = 108/134 (80.60%), Query Frame = 0
Query:    1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 134
            VI +VGYAT+S ASHFAYWLGS  AFCTAFY I+LL+LC L EPNGSRSL+LSASEG W +GLVLGLL  PS+F+GY  RDLFIGLG DFWGN+LF    NLSIIDA+FMSTS K  PL LS++GG   F +YR
Sbjct:    3 VILEVGYATYSSASHFAYWLGSFAAFCTAFYSIRLLALCFLSEPNGSRSLILSASEGSWPMGLVLGLLGVPSIFIGYLGRDLFIGLGTDFWGNALFSLPTNLSIIDAEFMSTSIKIFPLCLSIIGGLGSFYMYR 136          
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A8F0K0D6_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0K0D6_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 8.870e-58
Identity = 98/134 (73.13%), Postives = 112/134 (83.58%), Query Frame = 0
Query:    1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 134
            VI +VGYA++S +SHFA+W+GS  AFCTAFY I+LL+LC L EPNGSRS LLSASEG W +GLVLGLLA PSMF+GYFSRDLFIG+G DFWGN+LFC   NLS+IDA+FMSTS K  PL  SMLGG L FILYR
Sbjct:  404 VILEVGYASYSNSSHFAFWMGSFAAFCTAFYSIRLLALCFLAEPNGSRSSLLSASEGGWRMGLVLGLLAVPSMFIGYFSRDLFIGVGTDFWGNALFCLPINLSLIDAEFMSTSIKLFPLCCSMLGGLLSFILYR 537          
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A1Z4F5J5_MACPY (NADH-ubiquinone oxidoreductase chain 5 (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=A0A1Z4F5J5_MACPY)

HSP 1 Score: 188 bits (478), Expect = 1.670e-57
Identity = 94/134 (70.15%), Postives = 110/134 (82.09%), Query Frame = 0
Query:    1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 134
            VI +VGY+T+S +SHFAYWLGS  AFCTAFY I+LLSLC L EPNGSRSLLLSASEG   +GLVLG+LA PSMF+GY  RDLFIGLG DFWGN+LFC   NLSIIDA+FMS++ K  PL  S++GG + FILY+
Sbjct:   12 VILEVGYSTYSSSSHFAYWLGSFAAFCTAFYSIRLLSLCFLTEPNGSRSLLLSASEGGLPMGLVLGILALPSMFIGYLGRDLFIGLGTDFWGNALFCMPNNLSIIDAEFMSSNIKIFPLFCSIVGGGVSFILYK 145          
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: F8UWN3_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=87 Tax=Phaeophyceae TaxID=2870 RepID=F8UWN3_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.780e-56
Identity = 97/134 (72.39%), Postives = 109/134 (81.34%), Query Frame = 0
Query:    1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 134
            VI +VGYAT+S ASHFAYWLGS  AFCTAFY I+LL+LC L EPNGSRSLLLSASEG W +GLVLG+LA PSMF+GY  RDLFIGLG DFWGN+LFC   NLSIIDA+FMST  K +PL  S++GG   FILY 
Sbjct:  404 VILEVGYATYSNASHFAYWLGSLAAFCTAFYSIRLLALCFLSEPNGSRSLLLSASEGGWPMGLVLGILALPSMFIGYLGRDLFIGLGTDFWGNALFCMPSNLSIIDAEFMSTDIKLLPLCCSIIGGLASFILYN 537          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R4QQ84_9PHAE1.420e-6886.57NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Fuc... [more]
A0A8D5Z4B2_9PHAE7.220e-6272.39NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Pun... [more]
A0A1Z4F5P8_9PHAE4.470e-6173.13NADH-ubiquinone oxidoreductase chain 5 (Fragment) ... [more]
A0A1Z4F5K4_SACJA8.870e-6072.18NADH-ubiquinone oxidoreductase chain 5 (Fragment) ... [more]
A0A1Z4F5M6_COSCS1.390e-5971.64NADH-ubiquinone oxidoreductase chain 5 (Fragment) ... [more]
A0A8F0K255_9PHAE1.610e-5973.13NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Lam... [more]
A0A8D6C180_9PHAE3.170e-5870.90NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Pun... [more]
A0A8F0K0D6_9PHAE8.870e-5873.13NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Cho... [more]
A0A1Z4F5J5_MACPY1.670e-5770.15NADH-ubiquinone oxidoreductase chain 5 (Fragment) ... [more]
F8UWN3_9PHAE1.780e-5672.39NADH-ubiquinone oxidoreductase chain 5 n=87 Tax=Ph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..49
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 117..136
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig102contigF-serratus_M_contig102:643983..644396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig102.270.1mRNA_F-serratus_M_contig102.270.1Fucus serratus malemRNAF-serratus_M_contig102 643983..644396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig102.270.1 ID=prot_F-serratus_M_contig102.270.1|Name=mRNA_F-serratus_M_contig102.270.1|organism=Fucus serratus male|type=polypeptide|length=138bp
VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSL
LLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSF
NLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYRIIM*
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