mRNA_F-serratus_M_contig137.2699.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig137.2699.1 vs. uniprot
Match: D8LH58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH58_ECTSI) HSP 1 Score: 296 bits (759), Expect = 2.330e-85 Identity = 186/473 (39.32%), Postives = 267/473 (56.45%), Query Frame = 2
Query: 434 RPNHWYRQFILLALKSAVGEVGRYLEIKQTRGKGLSAASRELDHRRRAQALQSQLGPLADLVLSSHPDKVNAEAVGRFLDRSQEE-SGTGATLALALLDMGWSMPAPIRPKLGDRVFAAVYEALRRYGLFTRYGALHPPDARLPLVEIEPQRFDASMLESPVFKALEFGTSAASAS----IGILVVGFVFFVCASLSGDVTMTTYAFLFMSALIFEREVLNGAVFNELVNLLRPGLADVASVHEAGHVAMSYLVGCPISTYSLGGLASLKQGADMGSRASCTVIDPELAIARQSFPDESLSWTMDTMEPPTAGSVARDALLTQRVSRKLTPGDESDARLLEDEPLTVMEGEDAGRDESSEIEPDPGQYTMVNRFALSAMGGTVGETLVNGFGMGGRQDQLDLRYTLKSLWPSIPVSDIENTRKWAVTVGLDVLRDDGEAIRLLARNMRETRGLGRLFLDLEASLTRSDYSCTS 1837
R N YRQ ++LA+KS RYL + S R L+ +A+Q+ +G L D VLS PD+ NAEA+ R LDR +E+ G GATLAL LD W +PAPIRP +G AVYEALRR+G+FTR+G + PD L E P+ + M +SP+FKA +F T A S S IG +V + +V + G V + L ++ + FEREVL+ A+++E + ++P L + S HEAGHVA +YL G P++TY+LGGL SL+ G ++G SC +I+ EL+ AR P+E L+ EP R+ ++T E ARL L E +D + + + G++ M NR AL++MGG GE + NGF +GG D ++R K LWP + D+ T KWA L + + + A+ LLA+NMRE R +GRL LDL+ SLT +++ ++
Sbjct: 75 RVNPVYRQMVVLAVKSGAAGAARYLN--PSGESSTSTGKRALN-----KAVQAHVGQLMDAVLSPAPDEENAEAIKRILDRCEEQHKGAGATLALGYLDTVWWLPAPIRPAIGALAILAVYEALRRFGVFTRFGMVKLPDTELAPTETVPEPVEG-MEDSPIFKAAQFETDARSLSYYTLIGAFLVSTMSYVISGGDGQVAWS--GMLLLTFVAFEREVLHSALYSEAIIRVQPMLTQLTSAHEAGHVAAAYLTGLPVATYTLGGLGSLQHGDEVGCGPSCNIINAELSTARIWLPEELLTGPASEPEP--------------RLEARMTYPWEDPARLQNLVELDFSSSEIPHKDRVAPFDTE-GRHAMSNRMALTSMGGIAGEMMANGFDVGGGADYFNMRRRFKGLWPYMSQDDLRRTEKWAFLENLKIFKAERTAMELLAKNMRERRPIGRLMLDLDRSLTSTEFELSA 522 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig137.2699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig137.2699.1 >prot_F-serratus_M_contig137.2699.1 ID=prot_F-serratus_M_contig137.2699.1|Name=mRNA_F-serratus_M_contig137.2699.1|organism=Fucus serratus male|type=polypeptide|length=569bp MKHRFIHYSIWCWLTRRRISARHQLVSLVLCTARSSAFISSTRVSTRATCback to top mRNA from alignment at F-serratus_M_contig137:76800..83705- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig137.2699.1 ID=mRNA_F-serratus_M_contig137.2699.1|Name=mRNA_F-serratus_M_contig137.2699.1|organism=Fucus serratus male|type=mRNA|length=6906bp|location=Sequence derived from alignment at F-serratus_M_contig137:76800..83705- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig137:76800..83705- >mRNA_F-serratus_M_contig137.2699.1 ID=mRNA_F-serratus_M_contig137.2699.1|Name=mRNA_F-serratus_M_contig137.2699.1|organism=Fucus serratus male|type=CDS|length=3414bp|location=Sequence derived from alignment at F-serratus_M_contig137:76800..83705- (Fucus serratus male)back to top |