mRNA_F-serratus_M_contig137.2699.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig137.2699.1
Unique NamemRNA_F-serratus_M_contig137.2699.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig137.2699.1 vs. uniprot
Match: D8LH58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH58_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 2.330e-85
Identity = 186/473 (39.32%), Postives = 267/473 (56.45%), Query Frame = 2
Query:  434 RPNHWYRQFILLALKSAVGEVGRYLEIKQTRGKGLSAASRELDHRRRAQALQSQLGPLADLVLSSHPDKVNAEAVGRFLDRSQEE-SGTGATLALALLDMGWSMPAPIRPKLGDRVFAAVYEALRRYGLFTRYGALHPPDARLPLVEIEPQRFDASMLESPVFKALEFGTSAASAS----IGILVVGFVFFVCASLSGDVTMTTYAFLFMSALIFEREVLNGAVFNELVNLLRPGLADVASVHEAGHVAMSYLVGCPISTYSLGGLASLKQGADMGSRASCTVIDPELAIARQSFPDESLSWTMDTMEPPTAGSVARDALLTQRVSRKLTPGDESDARLLEDEPLTVMEGEDAGRDESSEIEPDPGQYTMVNRFALSAMGGTVGETLVNGFGMGGRQDQLDLRYTLKSLWPSIPVSDIENTRKWAVTVGLDVLRDDGEAIRLLARNMRETRGLGRLFLDLEASLTRSDYSCTS 1837
            R N  YRQ ++LA+KS      RYL    +     S   R L+     +A+Q+ +G L D VLS  PD+ NAEA+ R LDR +E+  G GATLAL  LD  W +PAPIRP +G     AVYEALRR+G+FTR+G +  PD  L   E  P+  +  M +SP+FKA +F T A S S    IG  +V  + +V +   G V  +    L ++ + FEREVL+ A+++E +  ++P L  + S HEAGHVA +YL G P++TY+LGGL SL+ G ++G   SC +I+ EL+ AR   P+E L+      EP              R+  ++T   E  ARL     L     E   +D  +  + + G++ M NR AL++MGG  GE + NGF +GG  D  ++R   K LWP +   D+  T KWA    L + + +  A+ LLA+NMRE R +GRL LDL+ SLT +++  ++
Sbjct:   75 RVNPVYRQMVVLAVKSGAAGAARYLN--PSGESSTSTGKRALN-----KAVQAHVGQLMDAVLSPAPDEENAEAIKRILDRCEEQHKGAGATLALGYLDTVWWLPAPIRPAIGALAILAVYEALRRFGVFTRFGMVKLPDTELAPTETVPEPVEG-MEDSPIFKAAQFETDARSLSYYTLIGAFLVSTMSYVISGGDGQVAWS--GMLLLTFVAFEREVLHSALYSEAIIRVQPMLTQLTSAHEAGHVAAAYLTGLPVATYTLGGLGSLQHGDEVGCGPSCNIINAELSTARIWLPEELLTGPASEPEP--------------RLEARMTYPWEDPARLQNLVELDFSSSEIPHKDRVAPFDTE-GRHAMSNRMALTSMGGIAGEMMANGFDVGGGADYFNMRRRFKGLWPYMSQDDLRRTEKWAFLENLKIFKAERTAMELLAKNMRERRPIGRLMLDLDRSLTSTEFELSA 522          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig137.2699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH58_ECTSI2.330e-8539.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig137contigF-serratus_M_contig137:76800..83705 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-24_000640.1
Exons10
Model size3445
Cds size1707
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig137.2699.1prot_F-serratus_M_contig137.2699.1Fucus serratus malepolypeptideF-serratus_M_contig137 78421..83557 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929348.096578-UTR-F-serratus_M_contig137:76799..768351622929348.096578-UTR-F-serratus_M_contig137:76799..76835Fucus serratus maleUTRF-serratus_M_contig137 76800..76835 -
1690962809.6892958-UTR-F-serratus_M_contig137:76799..768351690962809.6892958-UTR-F-serratus_M_contig137:76799..76835Fucus serratus maleUTRF-serratus_M_contig137 76800..76835 -
1622929348.1132581-UTR-F-serratus_M_contig137:76850..773531622929348.1132581-UTR-F-serratus_M_contig137:76850..77353Fucus serratus maleUTRF-serratus_M_contig137 76851..77353 -
1690962809.70897-UTR-F-serratus_M_contig137:76850..773531690962809.70897-UTR-F-serratus_M_contig137:76850..77353Fucus serratus maleUTRF-serratus_M_contig137 76851..77353 -
1622929348.1248744-UTR-F-serratus_M_contig137:77369..784201622929348.1248744-UTR-F-serratus_M_contig137:77369..78420Fucus serratus maleUTRF-serratus_M_contig137 77370..78420 -
1690962809.718518-UTR-F-serratus_M_contig137:77369..784201690962809.718518-UTR-F-serratus_M_contig137:77369..78420Fucus serratus maleUTRF-serratus_M_contig137 77370..78420 -
1622929348.2760012-UTR-F-serratus_M_contig137:83557..837051622929348.2760012-UTR-F-serratus_M_contig137:83557..83705Fucus serratus maleUTRF-serratus_M_contig137 83558..83705 -
1690962809.8057468-UTR-F-serratus_M_contig137:83557..837051690962809.8057468-UTR-F-serratus_M_contig137:83557..83705Fucus serratus maleUTRF-serratus_M_contig137 83558..83705 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929348.1351893-CDS-F-serratus_M_contig137:78420..786781622929348.1351893-CDS-F-serratus_M_contig137:78420..78678Fucus serratus maleCDSF-serratus_M_contig137 78421..78678 -
1690962809.7320523-CDS-F-serratus_M_contig137:78420..786781690962809.7320523-CDS-F-serratus_M_contig137:78420..78678Fucus serratus maleCDSF-serratus_M_contig137 78421..78678 -
1622929348.1490338-CDS-F-serratus_M_contig137:79278..796671622929348.1490338-CDS-F-serratus_M_contig137:79278..79667Fucus serratus maleCDSF-serratus_M_contig137 79279..79667 -
1690962809.7421684-CDS-F-serratus_M_contig137:79278..796671690962809.7421684-CDS-F-serratus_M_contig137:79278..79667Fucus serratus maleCDSF-serratus_M_contig137 79279..79667 -
1622929348.1638176-CDS-F-serratus_M_contig137:80209..803481622929348.1638176-CDS-F-serratus_M_contig137:80209..80348Fucus serratus maleCDSF-serratus_M_contig137 80210..80348 -
1690962809.7522874-CDS-F-serratus_M_contig137:80209..803481690962809.7522874-CDS-F-serratus_M_contig137:80209..80348Fucus serratus maleCDSF-serratus_M_contig137 80210..80348 -
1622929348.2019-CDS-F-serratus_M_contig137:80799..809191622929348.2019-CDS-F-serratus_M_contig137:80799..80919Fucus serratus maleCDSF-serratus_M_contig137 80800..80919 -
1690962809.7609887-CDS-F-serratus_M_contig137:80799..809191690962809.7609887-CDS-F-serratus_M_contig137:80799..80919Fucus serratus maleCDSF-serratus_M_contig137 80800..80919 -
1622929348.217775-CDS-F-serratus_M_contig137:81387..815111622929348.217775-CDS-F-serratus_M_contig137:81387..81511Fucus serratus maleCDSF-serratus_M_contig137 81388..81511 -
1690962809.7697995-CDS-F-serratus_M_contig137:81387..815111690962809.7697995-CDS-F-serratus_M_contig137:81387..81511Fucus serratus maleCDSF-serratus_M_contig137 81388..81511 -
1622929348.2368855-CDS-F-serratus_M_contig137:81840..820851622929348.2368855-CDS-F-serratus_M_contig137:81840..82085Fucus serratus maleCDSF-serratus_M_contig137 81841..82085 -
1690962809.778857-CDS-F-serratus_M_contig137:81840..820851690962809.778857-CDS-F-serratus_M_contig137:81840..82085Fucus serratus maleCDSF-serratus_M_contig137 81841..82085 -
1622929348.2536962-CDS-F-serratus_M_contig137:82280..824931622929348.2536962-CDS-F-serratus_M_contig137:82280..82493Fucus serratus maleCDSF-serratus_M_contig137 82281..82493 -
1690962809.7875776-CDS-F-serratus_M_contig137:82280..824931690962809.7875776-CDS-F-serratus_M_contig137:82280..82493Fucus serratus maleCDSF-serratus_M_contig137 82281..82493 -
1622929348.2641706-CDS-F-serratus_M_contig137:83338..835571622929348.2641706-CDS-F-serratus_M_contig137:83338..83557Fucus serratus maleCDSF-serratus_M_contig137 83339..83557 -
1690962809.7979038-CDS-F-serratus_M_contig137:83338..835571690962809.7979038-CDS-F-serratus_M_contig137:83338..83557Fucus serratus maleCDSF-serratus_M_contig137 83339..83557 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig137.2699.1

>prot_F-serratus_M_contig137.2699.1 ID=prot_F-serratus_M_contig137.2699.1|Name=mRNA_F-serratus_M_contig137.2699.1|organism=Fucus serratus male|type=polypeptide|length=569bp
MKHRFIHYSIWCWLTRRRISARHQLVSLVLCTARSSAFISSTRVSTRATC
YSYYASRQATARVAMTSDFDTEQHRQPKIASEDKDTEQTERCRTRRPNHW
YRQFILLALKSAVGEVGRYLEIKQTRGKGLSAASRELDHRRRAQALQSQL
GPLADLVLSSHPDKVNAEAVGRFLDRSQEESGTGATLALALLDMGWSMPA
PIRPKLGDRVFAAVYEALRRYGLFTRYGALHPPDARLPLVEIEPQRFDAS
MLESPVFKALEFGTSAASASIGILVVGFVFFVCASLSGDVTMTTYAFLFM
SALIFEREVLNGAVFNELVNLLRPGLADVASVHEAGHVAMSYLVGCPIST
YSLGGLASLKQGADMGSRASCTVIDPELAIARQSFPDESLSWTMDTMEPP
TAGSVARDALLTQRVSRKLTPGDESDARLLEDEPLTVMEGEDAGRDESSE
IEPDPGQYTMVNRFALSAMGGTVGETLVNGFGMGGRQDQLDLRYTLKSLW
PSIPVSDIENTRKWAVTVGLDVLRDDGEAIRLLARNMRETRGLGRLFLDL
EASLTRSDYSCTSQVENT*
back to top

mRNA from alignment at F-serratus_M_contig137:76800..83705-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig137.2699.1 ID=mRNA_F-serratus_M_contig137.2699.1|Name=mRNA_F-serratus_M_contig137.2699.1|organism=Fucus serratus male|type=mRNA|length=6906bp|location=Sequence derived from alignment at F-serratus_M_contig137:76800..83705- (Fucus serratus male)
CTTTGTTACTTTGCTGCTGTACCCGATATTACTGCTGCTAAAAGTGCTGA TCATACCCTACATGCTATACCCCAAGTACGTACGCACTCCAGCTGGTGAC CTAGATGGTGAAATCTGATCGCATCCAAACTTTCTGACCGAGTTCGACAT GAAACATCGCTTTATCCATTACTCTATCTGGTGTTGGCTAACTCGAAGGC GAATCAGTGCCAGGCATCAACTCGTGTCACTTGTCCTATGCACAGCACGC TCGTCTGCGTTCATCTCTTCGACGCGGGTTTCAACAAGAGCAACATGTTA TTCATATTACGCCAGCAGGCAAGCCACGGCTCGAGTGGCGATGACGAGCG ACTTCGACACCGAGCAGGTACGGGGTGGGTACCGTTCCAATAGGTGGAAT TGGTGGTGAAGCGCGCTGAATAGCCCCATGGGCAGGACAGGAAGTGGAGA CAAAGAAGAGTACAAAGCAAAAATGAAAGGCTATTCTATACCTCTTTCAC CAACCATCAGTTGGATTCACCCGACAGTCCTACCGTCGACGCCTCTACCT GGTACAACTGATGATGCTCTCCATAGCTCTAATTGATTGTAGAAAAATCC TAACACATATCTAAACATTGTAGGCAGAAACTATATGTTCCCACTCCCCA GCCTCCATGTTTATGGTATGGCCCTGCCAGATACCGTTGTAGTTAGCATT ATTCGCGATCTTTAAAGAGCGGTACGACTATCATCACTTGCGTCACCATC CTATTAATAGCAAGCCATACGAAGGCAATGAATACCAGGGCAGTAAATAG TATCTACATGGAATTTGCGAGAGAATGAAGTGATGAAGCCCCAGAAGCAA TAGTGGTCAACAGCCAGGCTCAACTTTGAATTTTGGTGTCCAACTTCTCC GGCGGCAAAAGAGGGACAAATACAGTCGTTCAGTATTATGGTGCAATACC TCTAGAGCGAAGCGCACTGTAGTATTACACCTGTCGTAACCAGTACCTAC GACGAAAATTGTGGAGGTACAGCCAATGTTTGCGCTGTACAGTAAATCGT ACCGATATAGTTTCCCCCTTGAAAACAAACACGGACAACGAGTATGCTCG GAAGGCTTGAATGCATTCTTTTTTTTTTGTAAATATTGTACTGTACAAAC CGTAGCAGAGGGCTAAATCTTCGTGTTTCCTCCTTTTTTGCGGACGACTT CCTTGGCACCAGCACCGGCAGCCAAAAATAGCGTCAGAAGATAAAGATAC CGAGCAAACTGAGCGGTGCAGAACAAGGAGGCCGAACCATTGGTACCGCC AATTCATACTGCTGGCCCTGAAGTCTGCCGTCGGTGAAGTGGGGCGCTAC TTGGAAATCAAGCAAACGAGGGGAAAGGGGTTATCGGCAGCATCAAGAGA GCTAGATCACCGTCGGAGAGCTCAGGTACGAGCACAAGTGACACAAACAA AAATGCTACTCGGCGCATGCCAGCATCCTTAGCTGTGCCAACTGTCGTTA ATCTACAGAAGTCATGAGGCATTACTTCTTGGATAAAGATAGCGGTGGCG GCCCCTTACGCTGAGCACCCGGCTTCTAGAATCGCTCATGAGTTGACAAC TGCCCTTGACAACTCCTCAGGCGCTACAGTCCCAGCTGGGTCCGCTCGCG GACCTCGTCCTTAGCTCACATCCCGACAAAGTAAACGCTGAAGCCGTGGG AAGATTCCTAGATCGTTCCCAGGAAGAGTCCGGAACAGGGGCGACACTGG CGCTGGCTCTCTTGGATATGGGTTGGTCTATGCCCGCGCCTATCCGTCCA AAACTCGGTGACCGGGTGTTCGCAGCGGTTTACGAGGCTCTCAGGAGATA CGGACTGTTCACTAGGTCAAGTTCATTGCTAAGCGCAGGATTACCACTTT GGGATTCTGCACCCAGTTAGTTTTTTATTTGTACGTATCACGAGCGCGGG CTTCGACGGTGAGCAAACTTTTACTTGTATCCCCTTGACCGCGACCGAGC GATCGGCATGCTAGACCCAGTTCTGCTACTGTGGCATTGATTTGCGCGAT GGAAGTACTGAGGTAGCGGATTTTTTTCACTCAAAATGATTAATGATTCT CGCGTAGTCCTCTCAGCGTTTCGTCGCCAATTTTTCGTTGAAATATGTCC AGAATATGTCGATGAAATTCCGCCACTCGATTCCGACGTCACAGATACGG TGCGCTGCATCCTCCCGATGCACGGTTGCCGTTAGTGGAGATAGAGCCGC AACGCTTCGACGCGAGCATGCTCGAGTCTCCGGTCTTCAAAGCCCTCGAG TTCGGCACTTCGGCGGCGGTGAGTCTTCTCGCATACTCAACGCCGCTTAC GTGAAACTACGTCGAAAGGCCGCCCTGGGAATTAGAGGCCGTTATTGATT TGACAGCAATTGAGGAGGTCAAGTATACAGTACAGTAGAAGGGAGGGACA TTCCCGCTTCCTCGTGGAGACTTGTTTAGAAACAAGTCTGGTTCACTATT ATTTTGAGCTGTCAATAGCTTGTTCTTGCTGAACCACAGTGCCCAAGGCA ACGGTAGGGTGATGTCGCCGTTCCGTTTGAAGTGTGTATGCTACGGTCGA CAATCTCCCACCAAACTCTCCCGGAGCACACAGTCGCCGCAAATGTCCGT GGTTTTTTCAAGAAGAATATTTTAGCTTGGCACGTGAAGTTCGACATCAT TCAGTAGGAGCGAGACTTTTGCCACCGGGGATCCTCCCGCTTTGACCTTG ACAATCCGAAACCACCGACCCCAATTTTTTCTGCAGTCCGCCTCCATTGG CATCCTTGTGGTGGGCTTCGTGTTTTTCGTGTGCGCCAGTCTGTCCGGGG ACGTGACGATGACGACCTACGCGTTCTTGTTCATGAGTGCCCTGATATTC GAAAGGGTGAGGTGTAGCTCTATTTTAGTTCGCCTTGCGGCTGCTCTCGA CCAAGGGCATATTTCTCCCGCGCTCGCTGGCCTCTTTGTCTACTAGATCA ATATCATACACAAGCTATCTTACGTTTGTAACGCGATGCCTAGGGCGATG CCCATTGCACGATTCTTCTGCTCACAATACACTCAAACACACTCACAGAG ATTCGACGATCGATCAAGTACCGCCTTGGCCATCGACCCCTCGTCGAAAA CCTTCTTATCCAACTAGGCTCTACCCCTTTACTCTAAATACATCAAGTCG TGTGTCTCGAGGGACATGGCTCTTCACTTCGACAGACCACTGTCCTGAAA GTATCTACTTTGAAAAAATCTTGCCAACGGGTGCAACTGATGCCAACAAA AGAATGACCTCGACTGACGCCTGGGCTCTACATGGTTGCTCGTGTGCCTA CCTCCAGGAGGTGCTGAACGGCGCAGTATTCAACGAGCTGGTTAACCTCC TCCGGCCTGGTTTGGCGGACGTTGCGTCTGTACACGAAGCCGGACATGTT GCCATGTCATATTTGGTCGGCTGCCCCATATCTACGTACTCTCTCGGTGA CCAAGACGTGACTGTGCCATTTTTGTCGTAACGAGCAAACGAGTGTGCGG GCATTCATGATTAAAAAGTGTCGCAAGAGTATCAGCAGGGCACGTGGGGG GGAATTTCCTCGAATCCATTGTTTTGTGGTAGGCCGAGAGGTTTGCTAGC TAGCTGAGCGGGTGCGTCGCCCCATCATATTCTCTGCGAGTAAGTTTGCA CGGTAAGCTCGGTGGATAAATCGCCGTACGACTTTATGTCTTACCCAGGT ACGAGATACTCATAGTATCATAGTAGGTACCTGACAACAGGTATTACAAG TAAATAGTAGGTACCTGGTATGTCGCGAGATCACATGCATCAGTGATTCG ACTAGTAATACTGCTGCCCAACACTGAAAACGCCTCCAAGCAGGCATGTA CCATACTCCAAAACAATCAGCATAAAAAGCTCAGAGCGATGAACGAACGC TCGGGATACCATCACCGCCTCCGCCAAGCGCTACTCACTATCTACCGTAT ATTCCCCACCGTGTTTCCACATGTTCTCTGCACGGCAGGGGGATTGGCCT CGTTAAAGCAGGGGGCGGATATGGGCTCCCGAGCCAGCTGTACAGTCATC GACCCTGAGCTCGCCATCGCGAGGCAGTCCTTTCCCGACGAATCCCTCTC ATGGACTATGGATACCATGGAGCCGCCTACCGCGGGTAGCGTAGCGCGAG ACGCGTTGCTGACACAGCGCGTGTCGAGAAAATTAACTCCTGGGGACGAG TCCGACGCGCGATTATTGGAAGATGAGCCCTTGACTGTAATGGAAGGAGA AGACGCGGGTCGAGACGAGTCGTCTGAAATTGAACCCGATCCCGGGCAAT ACACCATGGTAAACCGATTCGCGCTCTCGGCGATGGGGGGCACCGTGGGT GAAACGTTGGTGAACGGTTTTGGCATGGTGAGTGACTTCGACGAATTTGT TTCCTCTTGCAGTTTTCTAAACAAATGCAGCCGACTACAGTTCTAGTTGG CTTGATGATTTCCTACATCAATTACTAGAGCTCTACATTATTTTGCTAAA TTTATATATACCAGGTAAGTGGCTTCATTTGTTAATACTCGGTTCATTTT GTGGAGACCGGAGTTACCCTTGTGTGCAAGATGAGCCCGACTCATTCTCG CGGCAAACATAAAATACTATGGTATTTTTTTTCTCTCGTTCATGAAACCC GGTGACGTGGTCCCAAGCCCCCCAAACGTCAAGTGAACAAGCGCGACAGA GCCTAAAAATCATGCGCTTACGGATTCAGAAAGGAATAATCCTGTCAGCC CTCAAGAGTTGATCTCCCATTTTTTATATCTCTCAATGGAAATCGCACGT GCTGAAGGGGTAAACTTCCTGACTCGATACCGTATAATCAAAGAGTTTTT AGGAATATCATTTTGGGTATCAACTTTTGATGGAACGAACAACGCGATGA ACCCGGTCATCATGGCCCCGATTCGATTCGATTCCCGTGCGGTGTCAATG TTAACGATTTCGAACTACATCGATTAGGGTGGCCGCCAGGATCAGCTGGA TCTGCGTTACACGCTCAAAAGCCTTTGGCCCTCGATCCCCGTGAGCGATA TCGAGAATACGCGGAAATGGGCTGTCACCGTTGGGCTGGACGTGCTACGA GACGACGGCGAAGCGATTCGACTGTTGGCGAGAAACATGCGCGAGACTCG CGGGCTGGGGCGCCTGTTCTTGGATCTGGAGGCATCCTTGACACGCAGCG ATTATTCGTGTACTTCTCAAGTGGAAAACACGTAATTGGCACGTGTACAT GCTAAAATGCAAGTCTGCATCTCTTAGCGGGGCCCCTTTTACCTACTATA GGAAAAACAACTCATTTTCATGTTTTTGTTTGTTTGTTACGGTTCGTCAA ATGGGTATTAAGGGCATATGGATATCGGCAGCTCCGCCCCTGATTGGCCA GGAACGGTCCAGAAACATGCCAACACCTCTGCAACATAAACAAATAACAT ATTGATCGGTAGAAGAAAGGCGTGAATATGGGCGTTTTCGTCTCAAAATA CAATTTTGGTTTAAAACATTCCACCTAAAAGATCGCTGCTGTACATGTCA AAGAGAGGCGTATATTAATTAGTTCATGGTGACCTGCTAAGGCAGCTCTC GTTCGGAACTACCTTGAGGTTTACTAGCCCTGTGCCGGCGGACTCTCGAC AGTGAACGCCATCGGTACGCAGTTGCGTGACCCGATAAACTCGGGACTTA CCCGATGGCGTATGACGGTTTAATATAAATATATGGACGCCGCCGCGGAA ATCGGGAGGAATCCCGTAAGTAAGCACCAGATTCAGCCTGAGTATGGAGA TGAGCAGGCTGGCGCGGGACGGGACTGCCGAAACCGTCTCGCGAGACCAA ATTCTCAGGCACGAACGCGACAGGGATTTTCTTTTCCCTGTTCAGCTGAC CACGAGCAGGATTGGCAACCTTACCAGGTTGATCCATACTCCTGCTATGT GTGTGACCATACATGTCGCCATATCTTCCAAACGTAAGAGTTGATAGCCA TGTATTTTTGTTCAGAAGGAAGTTTTGGGCTTCGGAGGTTCATGTACCGA GGTTCTGCGACCGGCTTTTTGGTTCTGCAGAGATTTTGTGCAAGCCTGGG AATCCCACCGCAAATACCACGGAAAGGTGACTACACACGCTTAGTCGTCC TCTTCAGGAGTGCTCTAGCAGGGGTTTGGGAGGTCTGCTGCGCAAAACAG TGGTCTTGGGGGTGATATCAGGCTCAAGAGCAGTCCAAACCTGCTGCTGT TCCTACTGCTGTAGGTGCTGCATAACGGGAGACCTGGCTCGGACCGCTAA AGCACAACTTTTCGTCGCGGGGGATCTGCGTTGTTTACCATGTGCTACGC AGATGCACACCCGGTGATAATGGAGTCTACGTAGGAGGTGTGCAGAGGGT TATGACCGTGCGTCCAAATGGTATAACGAGGAACTGTACAGGGCTGCGAG GCTACTTTCTTTTCGCCATGCCATATGTCCTACAACCTCCCCAGGCCAAT AGCCCGGAGTTATAGGATCGAGTATACGCCTTGCAGAGCTGCCATGGCGC CGTGGTTGCTCCGTTATCCAAGGTGCCCCAAGAGGGCTCTGCAGTTTTCT CTCTGTTTTCTCTTATAAAGCTCCATTCGGCCTCCCACCCATTGTAGCTA CAGTCGCGTGACAGTTTCATGTAAAATATGCTGTCTCGTTTTCTTTTGTC CATCCCCGTTAAGGAAGGAAAGCAGGGCATATTGGAAGTAAGCTCTAAAC GCCTTGTGCGATGCTTGTACAGCTGTTTCGGGCCTTTCTGGAGGGAAAGT AACTGGTCCTATTTTGACAGAATAGAGGCACAACCTGAGTTTTTTTTGGA CGTGCA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig137:76800..83705-

>mRNA_F-serratus_M_contig137.2699.1 ID=mRNA_F-serratus_M_contig137.2699.1|Name=mRNA_F-serratus_M_contig137.2699.1|organism=Fucus serratus male|type=CDS|length=3414bp|location=Sequence derived from alignment at F-serratus_M_contig137:76800..83705- (Fucus serratus male)
ATGAAACATCGCTTTATCCATTACTCTATCTGGTGTTGGCTAACTCGAAG
GCGAATCAGTGCCAGGCATCAACTCGTGTCACTTGTCCTATGCACAGCAC
GCTCGTCTGCGTTCATCTCTTCGACGCGGGTTTCAACAAGAGCAACATGT
TATTCATATTACGCCAGCAGGCAAGCCACGGCTCGAGTGGCGATGACGAG
CGACTTCGACACCGAGCAGATGAAACATCGCTTTATCCATTACTCTATCT
GGTGTTGGCTAACTCGAAGGCGAATCAGTGCCAGGCATCAACTCGTGTCA
CTTGTCCTATGCACAGCACGCTCGTCTGCGTTCATCTCTTCGACGCGGGT
TTCAACAAGAGCAACATGTTATTCATATTACGCCAGCAGGCAAGCCACGG
CTCGAGTGGCGATGACGAGCGACTTCGACACCGAGCAGCACCGGCAGCCA
AAAATAGCGTCAGAAGATAAAGATACCGAGCAAACTGAGCGGTGCAGAAC
AAGGAGGCCGAACCATTGGTACCGCCAATTCATACTGCTGGCCCTGAAGT
CTGCCGTCGGTGAAGTGGGGCGCTACTTGGAAATCAAGCAAACGAGGGGA
AAGGGGTTATCGGCAGCATCAAGAGAGCTAGATCACCGTCGGAGAGCTCA
GCACCGGCAGCCAAAAATAGCGTCAGAAGATAAAGATACCGAGCAAACTG
AGCGGTGCAGAACAAGGAGGCCGAACCATTGGTACCGCCAATTCATACTG
CTGGCCCTGAAGTCTGCCGTCGGTGAAGTGGGGCGCTACTTGGAAATCAA
GCAAACGAGGGGAAAGGGGTTATCGGCAGCATCAAGAGAGCTAGATCACC
GTCGGAGAGCTCAGGCGCTACAGTCCCAGCTGGGTCCGCTCGCGGACCTC
GTCCTTAGCTCACATCCCGACAAAGTAAACGCTGAAGCCGTGGGAAGATT
CCTAGATCGTTCCCAGGAAGAGTCCGGAACAGGGGCGACACTGGCGCTGG
CTCTCTTGGATATGGGTTGGTCTATGCCCGCGCCTATCCGTCCAAAACTC
GGTGACCGGGTGTTCGCAGCGGTTTACGAGGCTCTCAGGAGATACGGACT
GTTCACTAGGCGCTACAGTCCCAGCTGGGTCCGCTCGCGGACCTCGTCCT
TAGCTCACATCCCGACAAAGTAAACGCTGAAGCCGTGGGAAGATTCCTAG
ATCGTTCCCAGGAAGAGTCCGGAACAGGGGCGACACTGGCGCTGGCTCTC
TTGGATATGGGTTGGTCTATGCCCGCGCCTATCCGTCCAAAACTCGGTGA
CCGGGTGTTCGCAGCGGTTTACGAGGCTCTCAGGAGATACGGACTGTTCA
CTAGATACGGTGCGCTGCATCCTCCCGATGCACGGTTGCCGTTAGTGGAG
ATAGAGCCGCAACGCTTCGACGCGAGCATGCTCGAGTCTCCGGTCTTCAA
AGCCCTCGAGTTCGGCACTTCGGCGGCGATACGGTGCGCTGCATCCTCCC
GATGCACGGTTGCCGTTAGTGGAGATAGAGCCGCAACGCTTCGACGCGAG
CATGCTCGAGTCTCCGGTCTTCAAAGCCCTCGAGTTCGGCACTTCGGCGG
CGTCCGCCTCCATTGGCATCCTTGTGGTGGGCTTCGTGTTTTTCGTGTGC
GCCAGTCTGTCCGGGGACGTGACGATGACGACCTACGCGTTCTTGTTCAT
GAGTGCCCTGATATTCGAAAGGTCCGCCTCCATTGGCATCCTTGTGGTGG
GCTTCGTGTTTTTCGTGTGCGCCAGTCTGTCCGGGGACGTGACGATGACG
ACCTACGCGTTCTTGTTCATGAGTGCCCTGATATTCGAAAGGGAGGTGCT
GAACGGCGCAGTATTCAACGAGCTGGTTAACCTCCTCCGGCCTGGTTTGG
CGGACGTTGCGTCTGTACACGAAGCCGGACATGTTGCCATGTCATATTTG
GTCGGCTGCCCCATATCTACGTACTCTCTCGGAGGTGCTGAACGGCGCAG
TATTCAACGAGCTGGTTAACCTCCTCCGGCCTGGTTTGGCGGACGTTGCG
TCTGTACACGAAGCCGGACATGTTGCCATGTCATATTTGGTCGGCTGCCC
CATATCTACGTACTCTCTCGGGGGATTGGCCTCGTTAAAGCAGGGGGCGG
ATATGGGCTCCCGAGCCAGCTGTACAGTCATCGACCCTGAGCTCGCCATC
GCGAGGCAGTCCTTTCCCGACGAATCCCTCTCATGGACTATGGATACCAT
GGAGCCGCCTACCGCGGGTAGCGTAGCGCGAGACGCGTTGCTGACACAGC
GCGTGTCGAGAAAATTAACTCCTGGGGACGAGTCCGACGCGCGATTATTG
GAAGATGAGCCCTTGACTGTAATGGAAGGAGAAGACGCGGGTCGAGACGA
GTCGTCTGAAATTGAACCCGATCCCGGGCAATACACCATGGTAAACCGAT
TCGCGCTCTCGGCGATGGGGGGCACCGTGGGTGAAACGTTGGTGAACGGT
TTTGGCATGGGGGATTGGCCTCGTTAAAGCAGGGGGCGGATATGGGCTCC
CGAGCCAGCTGTACAGTCATCGACCCTGAGCTCGCCATCGCGAGGCAGTC
CTTTCCCGACGAATCCCTCTCATGGACTATGGATACCATGGAGCCGCCTA
CCGCGGGTAGCGTAGCGCGAGACGCGTTGCTGACACAGCGCGTGTCGAGA
AAATTAACTCCTGGGGACGAGTCCGACGCGCGATTATTGGAAGATGAGCC
CTTGACTGTAATGGAAGGAGAAGACGCGGGTCGAGACGAGTCGTCTGAAA
TTGAACCCGATCCCGGGCAATACACCATGGTAAACCGATTCGCGCTCTCG
GCGATGGGGGGCACCGTGGGTGAAACGTTGGTGAACGGTTTTGGCATGGG
TGGCCGCCAGGATCAGCTGGATCTGCGTTACACGCTCAAAAGCCTTTGGC
CCTCGATCCCCGTGAGCGATATCGAGAATACGCGGAAATGGGCTGTCACC
GTTGGGCTGGACGTGCTACGAGACGACGGCGAAGCGATTCGACTGTTGGC
GAGAAACATGCGCGAGACTCGCGGGCTGGGGCGCCTGTTCTTGGATCTGG
AGGCATCCTTGACACGCAGCGATTATTCGTGTACTTCTCAAGTGGAAAAC
ACGTAAGGTGGCCGCCAGGATCAGCTGGATCTGCGTTACACGCTCAAAAG
CCTTTGGCCCTCGATCCCCGTGAGCGATATCGAGAATACGCGGAAATGGG
CTGTCACCGTTGGGCTGGACGTGCTACGAGACGACGGCGAAGCGATTCGA
CTGTTGGCGAGAAACATGCGCGAGACTCGCGGGCTGGGGCGCCTGTTCTT
GGATCTGGAGGCATCCTTGACACGCAGCGATTATTCGTGTACTTCTCAAG
TGGAAAACACGTAA
back to top