mRNA_F-serratus_M_contig1360.2657.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1360.2657.1 vs. uniprot
Match: A0A235HSJ8_9NOSO (Uncharacterized protein n=1 Tax=Nostoc sp. 'Peltigera membranacea cyanobiont' 213 TaxID=2014530 RepID=A0A235HSJ8_9NOSO) HSP 1 Score: 65.5 bits (158), Expect = 2.970e-12 Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 1 HPDVATSLDNLAVLLQSQGNYVDAEPLYNRVLAIGEETVGPRHPNTTLSLHNLAGLRH 174
HPDVA+SL+NLA L SQG Y DAEPLY LA+ + +G HPNT NLA L+H
Sbjct: 12 HPDVASSLNNLASLYDSQGRYSDAEPLYIEALAMCQRVLGVNHPNTAKVQKNLAILQH 69
BLAST of mRNA_F-serratus_M_contig1360.2657.1 vs. uniprot
Match: A0A1U7GY10_9NOSO (Uncharacterized protein n=2 Tax=Nostoc TaxID=1177 RepID=A0A1U7GY10_9NOSO) HSP 1 Score: 63.2 bits (152), Expect = 2.400e-11 Identity = 33/63 (52.38%), Postives = 39/63 (61.90%), Query Frame = 1
Query: 1 HPDVATSLDNLAVLLQSQGNYVDAEPLYNRVLAIGEETVGPRHPNTTLSLHNLAGLRHLQVMR 189
HPDVATSL+NLA L SQG Y DAEPLY+ LA+ + +G HP T NLA L+ R
Sbjct: 12 HPDVATSLNNLAGLYYSQGRYSDAEPLYSDALAMCQRVLGVNHPTTATIRENLAILQRQSTPR 74
BLAST of mRNA_F-serratus_M_contig1360.2657.1 vs. uniprot
Match: UPI00168570C4 (Tetratricopeptide repeat protein n=1 Tax=Nostoc sp. FACHB-892 TaxID=2692843 RepID=UPI00168570C4) HSP 1 Score: 62.4 bits (150), Expect = 7.410e-11 Identity = 33/57 (57.89%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 1 HPDVATSLDNLAVLLQSQGNYVDAEPLYNRVLAIGEETVGPRHPNTTLSLHNLAGLR 171
HPDVATSL+NLA L +SQG +AEPLY + L I E +G HPNT NLA LR
Sbjct: 70 HPDVATSLNNLASLYKSQGGCSEAEPLYIQALDILERRLGVNHPNTLACRKNLADLR 126
BLAST of mRNA_F-serratus_M_contig1360.2657.1 vs. uniprot
Match: A0A1B7VCZ1_9NOST (Uncharacterized protein (Fragment) n=1 Tax=Anabaena sp. LE011-02 TaxID=1710892 RepID=A0A1B7VCZ1_9NOST) HSP 1 Score: 60.5 bits (145), Expect = 9.950e-11 Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 1 HPDVATSLDNLAVLLQSQGNYVDAEPLYNRVLAIGEETVGPRHPNTTLSLHNLAGLR 171
HPDVA+SL+NLA L SQG Y +AEPLY + L I E+ +G HP+T + NL LR
Sbjct: 9 HPDVASSLNNLAGLYYSQGKYNEAEPLYQQALNIFEQRLGVDHPHTIIVRGNLEHLR 65
BLAST of mRNA_F-serratus_M_contig1360.2657.1 vs. uniprot
Match: UPI001ABB5345 (tetratricopeptide repeat protein n=1 Tax=Aetokthonos hydrillicola TaxID=1550245 RepID=UPI001ABB5345) HSP 1 Score: 60.8 bits (146), Expect = 1.430e-10 Identity = 31/57 (54.39%), Postives = 37/57 (64.91%), Query Frame = 1
Query: 1 HPDVATSLDNLAVLLQSQGNYVDAEPLYNRVLAIGEETVGPRHPNTTLSLHNLAGLR 171
HPDVATSL+NLA+L SQG Y +AEPL+ L I E ++ HPNT NL LR
Sbjct: 17 HPDVATSLNNLALLYNSQGRYNEAEPLHQEALKIAEVSLDVNHPNTITIRGNLKYLR 73
BLAST of mRNA_F-serratus_M_contig1360.2657.1 vs. uniprot
Match: A0A3E0ME31_MICAE (Tetratricopeptide repeat-containing protein (Fragment) n=2 Tax=Microcystis TaxID=1125 RepID=A0A3E0ME31_MICAE) HSP 1 Score: 59.7 bits (143), Expect = 1.870e-10 Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 1 HPDVATSLDNLAVLLQSQGNYVDAEPLYNRVLAIGEETVGPRHPNTTLSLHNLAGL 168
HPDVA+SL+NLA L +SQG Y +AEPL+ + LAI E+ + HP T NL L
Sbjct: 8 HPDVASSLNNLASLYESQGRYKEAEPLFLQALAIAEQALEENHPTTVKIRENLESL 63
BLAST of mRNA_F-serratus_M_contig1360.2657.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 3.020e-10 Identity = 35/73 (47.95%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 1 HPDVATSLDNLAVLLQSQG----------NYVDAEPLYNRVLAIGEETVGPRHPNTTLSLHNLAGLRHLQVMR 189
HPDVA SL+NLA +L+SQ N+ DAEPLY R LAI E+ GP HP L+N A L +Q +R
Sbjct: 88 HPDVAESLNNLAGVLRSQASVNPVFEILRNFQDAEPLYERSLAIDEKVYGPDHPEVATDLNNWAALYEVQAIR 160
BLAST of mRNA_F-serratus_M_contig1360.2657.1 vs. uniprot
Match: A0A7I8EIG7_9CHLR (Tetratricopeptide repeat protein n=1 Tax=Ktedonobacteria bacterium brp13 TaxID=2717365 RepID=A0A7I8EIG7_9CHLR) HSP 1 Score: 59.7 bits (143), Expect = 7.680e-10 Identity = 32/64 (50.00%), Postives = 37/64 (57.81%), Query Frame = 1
Query: 1 HPDVATSLDNLAVLLQSQGNYVDAEPLYNRVLAIGEETVGPRHPNTTLSLHNLAGLRHLQVMRH 192
HP A SL+NLA L +QG +AEPLY R LAI E +G HPN+ N A L LQ M H
Sbjct: 52 HPGTAASLNNLASLYDTQGKDTEAEPLYQRALAIFENILGQNHPNSQTVRRNYASL--LQAMEH 113
BLAST of mRNA_F-serratus_M_contig1360.2657.1 vs. uniprot
Match: A0A3B8JJF2_9CYAN (Tetratricopeptide repeat-containing protein (Fragment) n=1 Tax=Cyanobacteria bacterium UBA8553 TaxID=2055771 RepID=A0A3B8JJF2_9CYAN) HSP 1 Score: 57.0 bits (136), Expect = 1.640e-9 Identity = 28/47 (59.57%), Postives = 32/47 (68.09%), Query Frame = 1
Query: 28 NLAVLLQSQGNYVDAEPLYNRVLAIGEETVGPRHPNTTLSLHNLAGL 168
NLA L + QGNY AEPLY R LAI E+ +G HPN SL+NLA L
Sbjct: 1 NLAALYKVQGNYSQAEPLYQRSLAIWEKALGSEHPNVATSLNNLADL 47
BLAST of mRNA_F-serratus_M_contig1360.2657.1 vs. uniprot
Match: UPI001A8F76AC (tetratricopeptide repeat protein n=1 Tax=Vibrio alginolyticus TaxID=663 RepID=UPI001A8F76AC) HSP 1 Score: 57.4 bits (137), Expect = 2.790e-9 Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 1
Query: 1 HPDVATSLDNLAVLLQSQGNYVDAEPLYNRVLAIGEETVGPRH 129
HPDVATSL+NLA L ++QG Y AEPLY R LA+ E+ +GP H
Sbjct: 1 HPDVATSLNNLAELYRAQGQYALAEPLYKRSLAVLEKALGPDH 43 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1360.2657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1360.2657.1 >prot_F-serratus_M_contig1360.2657.1 ID=prot_F-serratus_M_contig1360.2657.1|Name=mRNA_F-serratus_M_contig1360.2657.1|organism=Fucus serratus male|type=polypeptide|length=65bp HPDVATSLDNLAVLLQSQGNYVDAEPLYNRVLAIGEETVGPRHPNTTLSLback to top mRNA from alignment at F-serratus_M_contig1360:192111..192977- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1360.2657.1 ID=mRNA_F-serratus_M_contig1360.2657.1|Name=mRNA_F-serratus_M_contig1360.2657.1|organism=Fucus serratus male|type=mRNA|length=867bp|location=Sequence derived from alignment at F-serratus_M_contig1360:192111..192977- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1360:192111..192977- >mRNA_F-serratus_M_contig1360.2657.1 ID=mRNA_F-serratus_M_contig1360.2657.1|Name=mRNA_F-serratus_M_contig1360.2657.1|organism=Fucus serratus male|type=CDS|length=390bp|location=Sequence derived from alignment at F-serratus_M_contig1360:192111..192977- (Fucus serratus male)back to top |