mRNA_F-serratus_M_contig1346.2574.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A6H5J8Z2_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J8Z2_9PHAE) HSP 1 Score: 325 bits (833), Expect = 1.590e-100 Identity = 167/344 (48.55%), Postives = 227/344 (65.99%), Query Frame = 3
Query: 231 YDEEVALETVKLTQIAYCTVELIDWACTGCRNFPGMRNVTLLDGERRNIRGFIGVDLGVKRKVAAAYQYATSTLDFDQKASQDYPVKRAVVADPDTLRGYQRDTSRGRDNAPRPRIVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRL------ALDAKLSFAPLYIYGSPRVGNAAFATYSASVGVPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFA-VRDHLTYLEVDYSLAYLQCQLLDAGEGRSNNEEEEAL 1241
YDE +A V+LT+ AYCT +L W+C C++FPGMRNVT+++GE+RN+RGF+GVD+G A+ +Y ++ D RA D G R + +PRIVI F+GTDP S++N +DD+E + YGG CE+C+VH GF+A+Y ++++Q+R + H++ NP +LITGHSLGAALA LC LDLR+ ++ +SFAPLY++GSPRVGN AFAT + GV IFR+VHHRDPVPH+P + WGY HPP EVFY + +SY VC+ SGED TCS +F+ +F + DHL YL V+YS AY+QCQL GE R++ E AL
Sbjct: 52 YDEGLASVIVRLTEAAYCTPQLASWSCKACQHFPGMRNVTVINGEKRNVRGFVGVDIG---DAEASNRYTSTPRG---PGPDDRRHLRAAEGDDKGAGGAAR--------SGKPRIVITFSGTDPSSVKNWIDDLEATTVPNTYGGLCEQCQVHRGFLAAYDLVKDQVRYAIGQHMQYNPHVQILITGHSLGAALAVLCFLDLRVNRGLGQGPNSSVSFAPLYLFGSPRVGNEAFATLTTRPGVSIFRLVHHRDPVPHLPLEAWGYHHPPTEVFYTEDQSSYQVCNKSGEDDTCSNQFWA---IFGNIEDHLWYLVVNYSTAYMQCQL--DGESRTDREAAPAL 376
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A7S4PFG9_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PFG9_9EUKA) HSP 1 Score: 171 bits (434), Expect = 4.760e-44 Identity = 116/334 (34.73%), Postives = 155/334 (46.41%), Query Frame = 3
Query: 210 SDVLEPAYDEEVALETVKLTQIAYCTVEL----IDWACTGCRNFPGMRNVTLLDGERRNIRGFIGVDLGVKRKVAAAYQYATSTLDFDQKASQDYPVKRAVVADPDTLRGYQRDTSRGRDNAPRPRIVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDL--RLALDAKLSFAPLYIYGSPRVGNAAFATYSASVGVPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEVDYSLAYLQCQL 1193
S L Y+E +A V AYC L DW+C C PG +NVT+ GF+ AY N P+ RI++AFAGTDPL I +DD++ AI ++Y C CKVH+GF ++K +E++I V PTA V +TGHSLGAAL+ C+L L + L + Y +G PRVGN F Y S+ FRV H DPVPH+P + Y H EV+Y+D T Y VC+GSGED CS + ++V DHL Y+ D++ YL C+L
Sbjct: 44 SPALGATYNETLATTFVDYCGSAYCCGNLGHGAADWSCNACALNPGTQNVTVFSDLEYEANGFV------------AY------------------------------------------NVPQNRIIVAFAGTDPLDIIEWIDDLD--AIKEKYPY-CSHCKVHKGFYDTWKSVEDKIYADVRNLRAAYPTATVAVTGHSLGAALSVHCVLGLIQDIGLVPGDTLETTYNFGDPRVGNDHFGKYFDSMMPDCFRVTHGHDPVPHLPNQWMEYHHVATEVYYNDKQTEYTVCNGSGEDKHCSDKNLVDLNV---ADHLNYVHFDFTSNYLSCKL 317
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A4D9D459_9STRA (Lipase_3 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D459_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.030e-42 Identity = 93/229 (40.61%), Postives = 133/229 (58.08%), Query Frame = 3
Query: 486 VKRAVVADPDTLRGYQRDTSRGRDNAPRPRIVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGNAAFATYSASVG----VPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEV 1160
V+R D D GY N+ +V+AFAGT I + +++ D Y G CE C+VH GF +Y + Q+R V L+++P A + +TGHSLGAA+A C++DL + + + +G PRVGN FAT+ AS+ P++R+VH+RDPVPH+P + +G+ H P EVFY++ TSY+VC+ SGEDP CS +F +DV DHL YL V
Sbjct: 19 VRRISAPDGDGFVGY---------NSVEGALVVAFAGTSMDDIVEWMANLDFKKEDFPYDG-CEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDL---MSLSYNVRRVVNFGQPRVGNKQFATFVASLAESLDFPLYRLVHNRDPVPHLPPRAFGFHHQPFEVFYNEDQTSYIVCNDSGEDPQCSDQFLVDLDV---ADHLNYLGV 231
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A6B2LEG4_9EUKA (Lipase_3 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LEG4_9EUKA) HSP 1 Score: 163 bits (412), Expect = 4.190e-42 Identity = 88/205 (42.93%), Postives = 123/205 (60.00%), Query Frame = 3
Query: 576 IVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGNAAFATYSASVGVPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGS-GEDPTCSYRFFFAVDVFAVRDHLTYLEVDYSLAYLQC 1187
I++AF GT+PLSI+N +DDI+ I Y C C VHEGF +Y +++++R L + P V +TGHSLGA LA L LDL ++S +Y +G PR+GN AF Y S ++RV H DPVPH+P + +G+VH P+EVFY+D +SY +C + GEDP+CS +F D+ DHL Y+ D+ YL C
Sbjct: 31 IIVAFTGTNPLSIKNWIDDIDT--IPTSYSA-CSGCAVHEGFYHTYLSVQDEVRNGFRSILLKYPNLPVQVTGHSLGAVLAELGALDLIQTFRVRVS--SMYHFGGPRLGNDAFTRYLLSSIGEVYRVTHWMDPVPHLPPEAFGFVHNPQEVFYNDDQSSYTLCSSTNGEDPSCSDQFVLDADI---PDHLNYIGFDFVSNYLSC 227
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A7S3ASR7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ASR7_9EUKA) HSP 1 Score: 163 bits (412), Expect = 7.680e-42 Identity = 94/215 (43.72%), Postives = 128/215 (59.53%), Query Frame = 3
Query: 558 NAPRPRIVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGNAAFATYSASV--GVPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDD-SMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEVDYSLAYLQCQL 1193
+ P +V+A GTDPL I +DDI+ ++ +Y C CKVH+GF +YK + +R + +P A + +TGHSLGAA+A +DL A +Y YG PRVGN+ FA+++A + VP+FRV H +DPVPH+P + G+ H PREV+Y S ++ VCDGSGEDPTCS AVDV V DHL Y+ D YL C+L
Sbjct: 42 DGPEGSLVVALTGTDPLKIAEWIDDIDTVSV--QYPA-CAGCKVHQGFYENYKSVHADMRVLIDGFAAEHPRAPLWVTGHSLGAAVAYHAAVDLMQGAHAG-RLRGVYTYGQPRVGNSNFASWTAQLLGAVPVFRVTHRQDPVPHLPLEAMGFAHVPREVYYAGASKGAHAVCDGSGEDPTCSNAH--AVDVNIV-DHLEYVGFDMVSNYLFCKL 249
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: W7U0K9_9STRA (Lipase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0K9_9STRA) HSP 1 Score: 163 bits (412), Expect = 7.650e-39 Identity = 93/232 (40.09%), Postives = 133/232 (57.33%), Query Frame = 3
Query: 477 DYPVKRAVVADPDTLRGYQRDTSRGRDNAPRPRIVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGNAAFATYSASVG----VPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEV 1160
D V+R D D GY N+ +V+AFAGT I + +++ D + G CE C+VH GF +Y + Q+R V L+++P A + +TGHSLGAA+A C++DL + + + +G PRVGN FAT+ AS+ P++R+VHHRDPVPH+P + +G+ H P EVFY++ TSY+VC+ SGED CS +F +DV DHL YL V
Sbjct: 360 DTEVRRISAPDGDGFVGY---------NSVEGALVVAFAGTSMDDIVEWMANLDFKKEDFPHDG-CEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDL---MSLSYNVRRVVNFGQPRVGNKQFATFVASLAESLDFPLYRLVHHRDPVPHLPPRAFGFHHQPFEVFYNEDQTSYIVCNDSGEDLQCSDQFLVDLDV---ADHLNYLGV 575
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A4D9CWF0_9STRA (Lipase_3 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWF0_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.730e-37 Identity = 83/203 (40.89%), Postives = 121/203 (59.61%), Query Frame = 3
Query: 576 IVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGN----------AAFATYSASVGVPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYL 1154
+V++FAGTD S+ N +DD++ G C++CKVH GF+ +Y + Q++ V +R +P A V +TGHSLGAALA LC++DL L + +G PRVGN + A SAS+ + +R+VHHRDPVPH+P ++G+ H P EVFY + T Y +CD +GED CS + +D +++DHL YL
Sbjct: 55 VVVSFAGTDTSSVANWIDDLDEVKTPWPLQG-CQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDL---LSLSYPVRAVVNFGQPRVGNQHVRDAGGFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHICDATGEDKHCSDHYL--IDP-SIKDHLNYL 250
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A7S2XH34_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XH34_9EUKA) HSP 1 Score: 152 bits (383), Expect = 8.920e-37 Identity = 116/345 (33.62%), Postives = 162/345 (46.96%), Query Frame = 3
Query: 207 WSDVLEPAYDEEVALETVKLTQIAYCTVELI----DWACTGCRNFPGMRNVTLLDGERRNIRGFIGVDLGVKRKVAAAYQYATSTLDFDQKASQDYPVKRAVVADPDTLRGYQRDTSRGRDNAPRPRIVIAFAGTDPLSIQNILDDIEVAAI---DQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGNAAFAT-YSASVGV--PIFRVVHHRDPVPHIPFKT----WGYVHPPREVFY--DDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEVDYSLAYLQCQL 1193
+SD + AY+E + V + AYC L +W C C+ FP + + +FD K K V DP D G IV++F+GTDPL IQN +DD++ A+ D G C CKV GF +Y+ +++ +R +VA + + +P A + ITGHSLG ALA +DLRL + +Y +G PRVGN AFA +S +G P +RV H DPVPH+P G+ H P EV+Y S VVCDGSGEDP+CS F D+ + DHL Y+ ++ Y+ C+L
Sbjct: 60 FSDSMSSAYNETRSKRMVAMCGAAYCAGTLGHGVGNWDCDVCKQFPDV-----------------------------------NASEFDDKGVLATNGKGFVAFDP-------HDGKYGS-------IVVSFSGTDPLQIQNWIDDLDYFAMTPTDYVAAG-CSGCKVDRGFYYTYQAVQKHVRESVANYKKSHPKAALWITGHSLGGALAVHAAVDLRLIGN---DITGVYTFGQPRVGNKAFAQWFSEGLGSSRPHYRVTHRFDPVPHLPMDNKGPIGGFFHVPTEVYYPKQHSDEGAVVCDGSGEDPSCSDSNF--ADIL-ITDHLFYVGFHFAKNYIGCKL 348
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A812I5H0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812I5H0_9DINO) HSP 1 Score: 143 bits (360), Expect = 3.010e-34 Identity = 105/315 (33.33%), Postives = 153/315 (48.57%), Query Frame = 3
Query: 228 AYDEEVALETVKLTQIAYCTVELID-WACTGCRNFPGMRNVTLLDGERRNIRGFIGVDLGVKRKVAAAYQYATSTLDFDQKASQDYPVKRAVVADPDTLRGYQRDTSRGRDNAPRPRIVIAFAGTDPLSIQN-ILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGNAAF-ATYSASVGVP-IFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEV 1160
+Y E+A E + IAYC + ++ W+C C+ P RN +ST+ +++ R V++ Y S G ++ F GT+PLS+++ I DD+E A + +C CKVHEGF SY + I +A + V +TGHSLGAA+A+L +LDL + Y +G PRVG+ A+ + + A++GV FRVVH+ DPVPH+P + G+ H EV+YD+S YVVCDGSGEDP C + V+V DHL Y+ V
Sbjct: 20 SYTPELAQEMAFFSSIAYCPGDQLEKWSCKPCKQHPLARN--------------------------------SSTVQYNEG--------RNVLS-------YVSQLSTGE-------ALVVFRGTEPLSLKDWIKDDLEFAKLKPASILDCGACKVHEGFYDSYMALRPGILAALAAQ-GTVKGSSVYVTGHSLGAAMASLAMLDLH---GQGFNIQQSYTFGQPRVGDDAYYSAFKAAMGVAGEFRVVHNCDPVPHLPLELMGFHHVSTEVWYDESNDDYVVCDGSGEDPACE-KCLLPVNVL---DHLDYVHV 272
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A0M0JHL5_9EUKA (Lipase family protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JHL5_9EUKA) HSP 1 Score: 142 bits (357), Expect = 5.240e-34 Identity = 80/202 (39.60%), Postives = 122/202 (60.40%), Query Frame = 3
Query: 561 APRPRIVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSF--APLYIYGSPRVGNAAFATYSASVGVPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEV 1160
AP IV++F G+D +I+N +D+I++ D +C+ C+VH GF ++ +++ + V N +A++ +TGHSLGAA+A LC ++L A L F A +Y YG PRVGN FA + + +RV H RD VPH+P + +G+ H EV+Y + +Y VCDGSGEDPTC+ + F AV ++ DHL Y+ +
Sbjct: 83 APGNDIVVSFRGSD--NIRNWIDNIDITKTDAY--PKCDGCRVHTGFYKAWNSVKDDVVKEVQRLHEANSSANIFVTGHSLGAAVAALCAVELG-ASSQSLGFPIAGVYTYGEPRVGNDQFAKFYMTGTQVSWRVTHWRDIVPHLPPEAFGFHHTATEVWYTEDQKNYTVCDGSGEDPTCADQLFEAV---SIDDHLQYMGI 276 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1346.2574.1 >prot_F-serratus_M_contig1346.2574.1 ID=prot_F-serratus_M_contig1346.2574.1|Name=mRNA_F-serratus_M_contig1346.2574.1|organism=Fucus serratus male|type=polypeptide|length=398bp MWVSPLRKYLDRWLLAVLIFSVEKATISQGRWSDVLEPAYDEEVALETVKback to top mRNA from alignment at F-serratus_M_contig1346:246356..249427- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1346.2574.1 ID=mRNA_F-serratus_M_contig1346.2574.1|Name=mRNA_F-serratus_M_contig1346.2574.1|organism=Fucus serratus male|type=mRNA|length=3072bp|location=Sequence derived from alignment at F-serratus_M_contig1346:246356..249427- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1346:246356..249427- >mRNA_F-serratus_M_contig1346.2574.1 ID=mRNA_F-serratus_M_contig1346.2574.1|Name=mRNA_F-serratus_M_contig1346.2574.1|organism=Fucus serratus male|type=CDS|length=2388bp|location=Sequence derived from alignment at F-serratus_M_contig1346:246356..249427- (Fucus serratus male)back to top |