mRNA_F-serratus_M_contig1346.2574.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1346.2574.1
Unique NamemRNA_F-serratus_M_contig1346.2574.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A6H5J8Z2_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J8Z2_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 1.590e-100
Identity = 167/344 (48.55%), Postives = 227/344 (65.99%), Query Frame = 3
Query:  231 YDEEVALETVKLTQIAYCTVELIDWACTGCRNFPGMRNVTLLDGERRNIRGFIGVDLGVKRKVAAAYQYATSTLDFDQKASQDYPVKRAVVADPDTLRGYQRDTSRGRDNAPRPRIVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRL------ALDAKLSFAPLYIYGSPRVGNAAFATYSASVGVPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFA-VRDHLTYLEVDYSLAYLQCQLLDAGEGRSNNEEEEAL 1241
            YDE +A   V+LT+ AYCT +L  W+C  C++FPGMRNVT+++GE+RN+RGF+GVD+G      A+ +Y ++          D    RA   D     G  R        + +PRIVI F+GTDP S++N +DD+E   +   YGG CE+C+VH GF+A+Y ++++Q+R  +  H++ NP   +LITGHSLGAALA LC LDLR+        ++ +SFAPLY++GSPRVGN AFAT +   GV IFR+VHHRDPVPH+P + WGY HPP EVFY +  +SY VC+ SGED TCS +F+    +F  + DHL YL V+YS AY+QCQL   GE R++ E   AL
Sbjct:   52 YDEGLASVIVRLTEAAYCTPQLASWSCKACQHFPGMRNVTVINGEKRNVRGFVGVDIG---DAEASNRYTSTPRG---PGPDDRRHLRAAEGDDKGAGGAAR--------SGKPRIVITFSGTDPSSVKNWIDDLEATTVPNTYGGLCEQCQVHRGFLAAYDLVKDQVRYAIGQHMQYNPHVQILITGHSLGAALAVLCFLDLRVNRGLGQGPNSSVSFAPLYLFGSPRVGNEAFATLTTRPGVSIFRLVHHRDPVPHLPLEAWGYHHPPTEVFYTEDQSSYQVCNKSGEDDTCSNQFWA---IFGNIEDHLWYLVVNYSTAYMQCQL--DGESRTDREAAPAL 376          
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A7S4PFG9_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PFG9_9EUKA)

HSP 1 Score: 171 bits (434), Expect = 4.760e-44
Identity = 116/334 (34.73%), Postives = 155/334 (46.41%), Query Frame = 3
Query:  210 SDVLEPAYDEEVALETVKLTQIAYCTVEL----IDWACTGCRNFPGMRNVTLLDGERRNIRGFIGVDLGVKRKVAAAYQYATSTLDFDQKASQDYPVKRAVVADPDTLRGYQRDTSRGRDNAPRPRIVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDL--RLALDAKLSFAPLYIYGSPRVGNAAFATYSASVGVPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEVDYSLAYLQCQL 1193
            S  L   Y+E +A   V     AYC   L     DW+C  C   PG +NVT+         GF+            AY                                          N P+ RI++AFAGTDPL I   +DD++  AI ++Y   C  CKVH+GF  ++K +E++I   V       PTA V +TGHSLGAAL+  C+L L   + L    +    Y +G PRVGN  F  Y  S+    FRV H  DPVPH+P +   Y H   EV+Y+D  T Y VC+GSGED  CS +    ++V    DHL Y+  D++  YL C+L
Sbjct:   44 SPALGATYNETLATTFVDYCGSAYCCGNLGHGAADWSCNACALNPGTQNVTVFSDLEYEANGFV------------AY------------------------------------------NVPQNRIIVAFAGTDPLDIIEWIDDLD--AIKEKYPY-CSHCKVHKGFYDTWKSVEDKIYADVRNLRAAYPTATVAVTGHSLGAALSVHCVLGLIQDIGLVPGDTLETTYNFGDPRVGNDHFGKYFDSMMPDCFRVTHGHDPVPHLPNQWMEYHHVATEVYYNDKQTEYTVCNGSGEDKHCSDKNLVDLNV---ADHLNYVHFDFTSNYLSCKL 317          
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A4D9D459_9STRA (Lipase_3 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D459_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.030e-42
Identity = 93/229 (40.61%), Postives = 133/229 (58.08%), Query Frame = 3
Query:  486 VKRAVVADPDTLRGYQRDTSRGRDNAPRPRIVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGNAAFATYSASVG----VPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEV 1160
            V+R    D D   GY         N+    +V+AFAGT    I   + +++    D  Y G CE C+VH GF  +Y  +  Q+R  V   L+++P A + +TGHSLGAA+A  C++DL   +    +   +  +G PRVGN  FAT+ AS+      P++R+VH+RDPVPH+P + +G+ H P EVFY++  TSY+VC+ SGEDP CS +F   +DV    DHL YL V
Sbjct:   19 VRRISAPDGDGFVGY---------NSVEGALVVAFAGTSMDDIVEWMANLDFKKEDFPYDG-CEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDL---MSLSYNVRRVVNFGQPRVGNKQFATFVASLAESLDFPLYRLVHNRDPVPHLPPRAFGFHHQPFEVFYNEDQTSYIVCNDSGEDPQCSDQFLVDLDV---ADHLNYLGV 231          
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A6B2LEG4_9EUKA (Lipase_3 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LEG4_9EUKA)

HSP 1 Score: 163 bits (412), Expect = 4.190e-42
Identity = 88/205 (42.93%), Postives = 123/205 (60.00%), Query Frame = 3
Query:  576 IVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGNAAFATYSASVGVPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGS-GEDPTCSYRFFFAVDVFAVRDHLTYLEVDYSLAYLQC 1187
            I++AF GT+PLSI+N +DDI+   I   Y   C  C VHEGF  +Y  +++++R      L + P   V +TGHSLGA LA L  LDL      ++S   +Y +G PR+GN AF  Y  S    ++RV H  DPVPH+P + +G+VH P+EVFY+D  +SY +C  + GEDP+CS +F    D+    DHL Y+  D+   YL C
Sbjct:   31 IIVAFTGTNPLSIKNWIDDIDT--IPTSYSA-CSGCAVHEGFYHTYLSVQDEVRNGFRSILLKYPNLPVQVTGHSLGAVLAELGALDLIQTFRVRVS--SMYHFGGPRLGNDAFTRYLLSSIGEVYRVTHWMDPVPHLPPEAFGFVHNPQEVFYNDDQSSYTLCSSTNGEDPSCSDQFVLDADI---PDHLNYIGFDFVSNYLSC 227          
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A7S3ASR7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ASR7_9EUKA)

HSP 1 Score: 163 bits (412), Expect = 7.680e-42
Identity = 94/215 (43.72%), Postives = 128/215 (59.53%), Query Frame = 3
Query:  558 NAPRPRIVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGNAAFATYSASV--GVPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDD-SMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEVDYSLAYLQCQL 1193
            + P   +V+A  GTDPL I   +DDI+  ++  +Y   C  CKVH+GF  +YK +   +R  +      +P A + +TGHSLGAA+A    +DL     A      +Y YG PRVGN+ FA+++A +   VP+FRV H +DPVPH+P +  G+ H PREV+Y   S  ++ VCDGSGEDPTCS     AVDV  V DHL Y+  D    YL C+L
Sbjct:   42 DGPEGSLVVALTGTDPLKIAEWIDDIDTVSV--QYPA-CAGCKVHQGFYENYKSVHADMRVLIDGFAAEHPRAPLWVTGHSLGAAVAYHAAVDLMQGAHAG-RLRGVYTYGQPRVGNSNFASWTAQLLGAVPVFRVTHRQDPVPHLPLEAMGFAHVPREVYYAGASKGAHAVCDGSGEDPTCSNAH--AVDVNIV-DHLEYVGFDMVSNYLFCKL 249          
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: W7U0K9_9STRA (Lipase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0K9_9STRA)

HSP 1 Score: 163 bits (412), Expect = 7.650e-39
Identity = 93/232 (40.09%), Postives = 133/232 (57.33%), Query Frame = 3
Query:  477 DYPVKRAVVADPDTLRGYQRDTSRGRDNAPRPRIVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGNAAFATYSASVG----VPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEV 1160
            D  V+R    D D   GY         N+    +V+AFAGT    I   + +++    D  + G CE C+VH GF  +Y  +  Q+R  V   L+++P A + +TGHSLGAA+A  C++DL   +    +   +  +G PRVGN  FAT+ AS+      P++R+VHHRDPVPH+P + +G+ H P EVFY++  TSY+VC+ SGED  CS +F   +DV    DHL YL V
Sbjct:  360 DTEVRRISAPDGDGFVGY---------NSVEGALVVAFAGTSMDDIVEWMANLDFKKEDFPHDG-CEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDL---MSLSYNVRRVVNFGQPRVGNKQFATFVASLAESLDFPLYRLVHHRDPVPHLPPRAFGFHHQPFEVFYNEDQTSYIVCNDSGEDLQCSDQFLVDLDV---ADHLNYLGV 575          
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A4D9CWF0_9STRA (Lipase_3 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWF0_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.730e-37
Identity = 83/203 (40.89%), Postives = 121/203 (59.61%), Query Frame = 3
Query:  576 IVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGN----------AAFATYSASVGVPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYL 1154
            +V++FAGTD  S+ N +DD++         G C++CKVH GF+ +Y  +  Q++  V   +R +P A V +TGHSLGAALA LC++DL   L        +  +G PRVGN          +  A  SAS+ +  +R+VHHRDPVPH+P  ++G+ H P EVFY  + T Y +CD +GED  CS  +   +D  +++DHL YL
Sbjct:   55 VVVSFAGTDTSSVANWIDDLDEVKTPWPLQG-CQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDL---LSLSYPVRAVVNFGQPRVGNQHVRDAGGFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHICDATGEDKHCSDHYL--IDP-SIKDHLNYL 250          
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A7S2XH34_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XH34_9EUKA)

HSP 1 Score: 152 bits (383), Expect = 8.920e-37
Identity = 116/345 (33.62%), Postives = 162/345 (46.96%), Query Frame = 3
Query:  207 WSDVLEPAYDEEVALETVKLTQIAYCTVELI----DWACTGCRNFPGMRNVTLLDGERRNIRGFIGVDLGVKRKVAAAYQYATSTLDFDQKASQDYPVKRAVVADPDTLRGYQRDTSRGRDNAPRPRIVIAFAGTDPLSIQNILDDIEVAAI---DQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGNAAFAT-YSASVGV--PIFRVVHHRDPVPHIPFKT----WGYVHPPREVFY--DDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEVDYSLAYLQCQL 1193
            +SD +  AY+E  +   V +   AYC   L     +W C  C+ FP +                                   +  +FD K       K  V  DP        D   G        IV++F+GTDPL IQN +DD++  A+   D    G C  CKV  GF  +Y+ +++ +R +VA + + +P A + ITGHSLG ALA    +DLRL  +       +Y +G PRVGN AFA  +S  +G   P +RV H  DPVPH+P        G+ H P EV+Y    S    VVCDGSGEDP+CS   F   D+  + DHL Y+   ++  Y+ C+L
Sbjct:   60 FSDSMSSAYNETRSKRMVAMCGAAYCAGTLGHGVGNWDCDVCKQFPDV-----------------------------------NASEFDDKGVLATNGKGFVAFDP-------HDGKYGS-------IVVSFSGTDPLQIQNWIDDLDYFAMTPTDYVAAG-CSGCKVDRGFYYTYQAVQKHVRESVANYKKSHPKAALWITGHSLGGALAVHAAVDLRLIGN---DITGVYTFGQPRVGNKAFAQWFSEGLGSSRPHYRVTHRFDPVPHLPMDNKGPIGGFFHVPTEVYYPKQHSDEGAVVCDGSGEDPSCSDSNF--ADIL-ITDHLFYVGFHFAKNYIGCKL 348          
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A812I5H0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812I5H0_9DINO)

HSP 1 Score: 143 bits (360), Expect = 3.010e-34
Identity = 105/315 (33.33%), Postives = 153/315 (48.57%), Query Frame = 3
Query:  228 AYDEEVALETVKLTQIAYCTVELID-WACTGCRNFPGMRNVTLLDGERRNIRGFIGVDLGVKRKVAAAYQYATSTLDFDQKASQDYPVKRAVVADPDTLRGYQRDTSRGRDNAPRPRIVIAFAGTDPLSIQN-ILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSFAPLYIYGSPRVGNAAF-ATYSASVGVP-IFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEV 1160
            +Y  E+A E    + IAYC  + ++ W+C  C+  P  RN                                +ST+ +++         R V++       Y    S G         ++ F GT+PLS+++ I DD+E A +      +C  CKVHEGF  SY  +   I   +A        + V +TGHSLGAA+A+L +LDL        +    Y +G PRVG+ A+ + + A++GV   FRVVH+ DPVPH+P +  G+ H   EV+YD+S   YVVCDGSGEDP C  +    V+V    DHL Y+ V
Sbjct:   20 SYTPELAQEMAFFSSIAYCPGDQLEKWSCKPCKQHPLARN--------------------------------SSTVQYNEG--------RNVLS-------YVSQLSTGE-------ALVVFRGTEPLSLKDWIKDDLEFAKLKPASILDCGACKVHEGFYDSYMALRPGILAALAAQ-GTVKGSSVYVTGHSLGAAMASLAMLDLH---GQGFNIQQSYTFGQPRVGDDAYYSAFKAAMGVAGEFRVVHNCDPVPHLPLELMGFHHVSTEVWYDESNDDYVVCDGSGEDPACE-KCLLPVNVL---DHLDYVHV 272          
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Match: A0A0M0JHL5_9EUKA (Lipase family protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JHL5_9EUKA)

HSP 1 Score: 142 bits (357), Expect = 5.240e-34
Identity = 80/202 (39.60%), Postives = 122/202 (60.40%), Query Frame = 3
Query:  561 APRPRIVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASYKVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKLSF--APLYIYGSPRVGNAAFATYSASVGVPIFRVVHHRDPVPHIPFKTWGYVHPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEV 1160
            AP   IV++F G+D  +I+N +D+I++   D     +C+ C+VH GF  ++  +++ +   V      N +A++ +TGHSLGAA+A LC ++L  A    L F  A +Y YG PRVGN  FA +  +     +RV H RD VPH+P + +G+ H   EV+Y +   +Y VCDGSGEDPTC+ + F AV   ++ DHL Y+ +
Sbjct:   83 APGNDIVVSFRGSD--NIRNWIDNIDITKTDAY--PKCDGCRVHTGFYKAWNSVKDDVVKEVQRLHEANSSANIFVTGHSLGAAVAALCAVELG-ASSQSLGFPIAGVYTYGEPRVGNDQFAKFYMTGTQVSWRVTHWRDIVPHLPPEAFGFHHTATEVWYTEDQKNYTVCDGSGEDPTCADQLFEAV---SIDDHLQYMGI 276          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1346.2574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J8Z2_9PHAE1.590e-10048.55Lipase_3 domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S4PFG9_9EUKA4.760e-4434.73Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A4D9D459_9STRA1.030e-4240.61Lipase_3 domain-containing protein n=1 Tax=Nannoch... [more]
A0A6B2LEG4_9EUKA4.190e-4242.93Lipase_3 domain-containing protein n=1 Tax=Arcella... [more]
A0A7S3ASR7_9EUKA7.680e-4243.72Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
W7U0K9_9STRA7.650e-3940.09Lipase n=1 Tax=Nannochloropsis gaditana TaxID=7252... [more]
A0A4D9CWF0_9STRA1.730e-3740.89Lipase_3 domain-containing protein n=3 Tax=Monodop... [more]
A0A7S2XH34_9EUKA8.920e-3733.62Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A812I5H0_9DINO3.010e-3433.33Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A0M0JHL5_9EUKA5.240e-3439.60Lipase family protein n=1 Tax=Chrysochromulina tob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1346contigF-serratus_M_contig1346:246356..249427 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score324.7
Seed ortholog evalue6e-86
Seed eggNOG ortholog2880.D8LBM6
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.phospholipase A1 activity
EggNOG OGsKOG4569@1,KOG4569@2759
Ec32 ortholog descriptionLipase domain protein
Ec32 orthologEc-27_003400.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size2392
Cds size1194
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1346.2574.1prot_F-serratus_M_contig1346.2574.1Fucus serratus malepolypeptideF-serratus_M_contig1346 247552..249314 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929324.6069236-UTR-F-serratus_M_contig1346:246355..2466181622929324.6069236-UTR-F-serratus_M_contig1346:246355..246618Fucus serratus maleUTRF-serratus_M_contig1346 246356..246618 -
1690962799.4213338-UTR-F-serratus_M_contig1346:246355..2466181690962799.4213338-UTR-F-serratus_M_contig1346:246355..246618Fucus serratus maleUTRF-serratus_M_contig1346 246356..246618 -
1622929324.6210446-UTR-F-serratus_M_contig1346:246729..2475511622929324.6210446-UTR-F-serratus_M_contig1346:246729..247551Fucus serratus maleUTRF-serratus_M_contig1346 246730..247551 -
1690962799.4316564-UTR-F-serratus_M_contig1346:246729..2475511690962799.4316564-UTR-F-serratus_M_contig1346:246729..247551Fucus serratus maleUTRF-serratus_M_contig1346 246730..247551 -
1622929324.668664-UTR-F-serratus_M_contig1346:249314..2494271622929324.668664-UTR-F-serratus_M_contig1346:249314..249427Fucus serratus maleUTRF-serratus_M_contig1346 249315..249427 -
1690962799.4559193-UTR-F-serratus_M_contig1346:249314..2494271690962799.4559193-UTR-F-serratus_M_contig1346:249314..249427Fucus serratus maleUTRF-serratus_M_contig1346 249315..249427 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929324.6339278-CDS-F-serratus_M_contig1346:247551..2481271622929324.6339278-CDS-F-serratus_M_contig1346:247551..248127Fucus serratus maleCDSF-serratus_M_contig1346 247552..248127 -
1690962799.4397202-CDS-F-serratus_M_contig1346:247551..2481271690962799.4397202-CDS-F-serratus_M_contig1346:247551..248127Fucus serratus maleCDSF-serratus_M_contig1346 247552..248127 -
1622929324.6507354-CDS-F-serratus_M_contig1346:248696..2493141622929324.6507354-CDS-F-serratus_M_contig1346:248696..249314Fucus serratus maleCDSF-serratus_M_contig1346 248697..249314 -
1690962799.4480457-CDS-F-serratus_M_contig1346:248696..2493141690962799.4480457-CDS-F-serratus_M_contig1346:248696..249314Fucus serratus maleCDSF-serratus_M_contig1346 248697..249314 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1346.2574.1

>prot_F-serratus_M_contig1346.2574.1 ID=prot_F-serratus_M_contig1346.2574.1|Name=mRNA_F-serratus_M_contig1346.2574.1|organism=Fucus serratus male|type=polypeptide|length=398bp
MWVSPLRKYLDRWLLAVLIFSVEKATISQGRWSDVLEPAYDEEVALETVK
LTQIAYCTVELIDWACTGCRNFPGMRNVTLLDGERRNIRGFIGVDLGVKR
KVAAAYQYATSTLDFDQKASQDYPVKRAVVADPDTLRGYQRDTSRGRDNA
PRPRIVIAFAGTDPLSIQNILDDIEVAAIDQEYGGECEKCKVHEGFVASY
KVIEEQIRGTVALHLRRNPTADVLITGHSLGAALATLCLLDLRLALDAKL
SFAPLYIYGSPRVGNAAFATYSASVGVPIFRVVHHRDPVPHIPFKTWGYV
HPPREVFYDDSMTSYVVCDGSGEDPTCSYRFFFAVDVFAVRDHLTYLEVD
YSLAYLQCQLLDAGEGRSNNEEEEALEAAKAATVPRLGEGGPRFRVK*
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mRNA from alignment at F-serratus_M_contig1346:246356..249427-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1346.2574.1 ID=mRNA_F-serratus_M_contig1346.2574.1|Name=mRNA_F-serratus_M_contig1346.2574.1|organism=Fucus serratus male|type=mRNA|length=3072bp|location=Sequence derived from alignment at F-serratus_M_contig1346:246356..249427- (Fucus serratus male)
GCTGAAAAAAGTGCCCACAAATCCTTCTGACTGCTAGTACGAAAAGGGCT CGACCTGTCAGTTCGCACTGTCCCACAACCTCAATCACGTACGGGCTGCC CGCCAAGAGTACTATGTGGGTGTCCCCCTTGCGAAAATATCTAGATAGGT GGCTCCTTGCTGTCCTGATCTTCTCTGTTGAGAAAGCCACTATTTCCCAA GGCCGTTGGTCTGATGTTCTTGAGCCCGCCTACGATGAAGAGGTGGCGCT CGAGACCGTCAAGTTGACCCAGATTGCTTATTGCACGGTGGAGCTCATTG ACTGGGCCTGCACCGGCTGCCGAAATTTTCCAGGCATGAGGAACGTGACC CTTTTGGATGGGGAACGGCGAAACATCCGTGGCTTTATTGGTGTTGACCT TGGTGTGAAGAGAAAAGTTGCGGCAGCATACCAGTACGCTACTTCAACGT TGGACTTCGACCAAAAGGCGTCCCAAGATTATCCTGTCAAGCGAGCTGTC GTTGCAGACCCCGACACTTTGCGAGGATATCAGCGTGATACCAGCAGGGG AAGAGACAATGCTCCTAGACCGCGAATCGTTATTGCGTTTGCCGGGACTG ATCCACTTAGCATCCAAAATATTTTGGACGATATCGAAGTGGCTGCTATC GATCAAGAATACGGGGGAGAATGTGAAAAGTGCAAGGTTCATGAGGGTTT CGTCGCCTCGTACAAAGTTATCGAGGAACAGGTGCGTGCACCTAGAGCAG AACAGACACAGAGTGCGCGCGTGTTCGCCAGATTAGGCACCAACCCTGTA CGTACTTGTATTCATTGTGAGCTCCTGGTACTCAACTAGAGCTATCATAC TGTATAACCGAGTACCGGTACCAACTGCTGAGTAGTACCGTTCGATCTTC TTTTCGAAAATCGTTTTCTTTAAAAACAAAATCGAATCATGTCCGAGCCC GAGTCCTTTTCCTACTATTTAATAATAGACATTCTGCCAGCAAGTCTTCT TTCAGCAAGAACTATCGCTGAACACCCGAAATACCGAACATGTAATCGAG GGGAGGCTCGATCGTCATTCAAGAGCATCCTGCGATGTTGGACGGGGTTG ATATGCGCAACAAGGCTGTCGTGTGCGGGGACATGGGCGTGACATTGTTC CCCCAAACTGACTGTTTGCGGCACCATAAATATTAGCAGACCTGTTTACG TTGTACAAGCTGTTTTAGAAAAACTGTCGATCATGGTGAATAGCTTCTTG TTGTCTATGCCCTCTGCCCTTTCCGCTCTCTCTATCTCAACAACCGGCAG ATTCGTGGTACGGTTGCTCTTCACCTTCGTCGCAACCCCACCGCGGACGT GCTCATCACGGGCCATTCTCTCGGCGCAGCTTTGGCCACTCTATGCTTAC TTGACTTGCGATTGGCTCTCGACGCAAAGCTTTCCTTCGCGCCTCTTTAC ATCTATGGCTCCCCCCGGGTGGGGAACGCCGCCTTCGCGACGTACTCTGC CTCGGTCGGGGTGCCGATCTTCCGCGTGGTGCATCATCGTGACCCCGTAC CTCACATACCGTTCAAAACTTGGGGCTACGTTCACCCGCCGAGAGAAGTG TTTTACGATGATTCCATGACAAGTTACGTTGTCTGTGATGGCAGCGGGGA GGATCCAACGTGTTCGTATCGGTTCTTCTTCGCGGTCGATGTGTTTGCTG TTCGTGATCATCTCACCTACCTGGAGGTGGACTACTCGTTGGCATACCTC CAGTGCCAACTACTAGACGCTGGCGAGGGAAGGTCAAATAATGAAGAGGA GGAGGCATTGGAAGCAGCGAAGGCGGCGACCGTGCCAAGACTCGGTGAGG GAGGACCCCGATTCCGTGTGAAATGACCTGCCCGCCTGTGTGGTACGCTA TCATCACAGGTAGCTTGAACAATTGGCGGGAGAGGCCTTGAAAGTACAAT TGCGACAACTGTAATGGAAAAGAGGCAGTCGCTCGAGCAACCCCCGGTGA AGAATTCCCTAGAAGGCTTAGGTGCAGCCGTGGTGATGTGTTGGGACAAA AATATTTCGGAAGACAGGGGATCACAAATATCGTGGGAAAATCGGTTTCT CACAACGTCTGTCGGATCTCGAGCATGTATCGTGTAATGAGTTTTTGTGA CGGATCGATATTCAGATAGAAGCTGACGAGCAATTACCAAACGCAGTATT AATGTATAGTACGCGTACGTATCTGATGATCACGATCATTATCATAGAGG TTAATATGTTGATATAGAAGTTCTTCTATTGTTTCAAGTGGCTGGGAAGG AGGGAATGCCAGTGGCTTGCGCATAGGCGTTCTTGCCACGTTTACACCTG AGGAGAACTGAGACGAGGTAAGCTTTGCGAATAACTAGAGACATGCCATT TTAGTCACATGTATTTATTGGACTATTTAAATCCAAATTTATTTGTATCA TAGTGCGTGAAGAGGGGTACAGTGCAGTAAGCGCGGAAGACGGTATCACA GCTTCTTGCTTTTGTCCAATTATTGAGAGGGTTCAAGTTCGCCGAGGATG TGACAACTCATTCCCCAACCAGGTTCGAGAGGGAACATATATGCTATTAA TAGCTCATTTTGCTTCCCTCCGATAGACTATATGCAGCCCAGGACGAGGG AAAATGGCGCAGAACGGCAGAACAAGGGGCGGAACGTTTCATGGCAAAAT GGATCGCTGCCGAGAAAGTCAAGGCTGGACTACGGCACGCAGTGGTATGC CCGAACGTGACGGGAAGGACCAAGAAGAGGATAGCCCAAAGTAAGCGGGC TCGTGCTGGTTCGCTCGCCCTTGTTGACTAGCCCCAAGTGGCGCGAACTG GTATCCTCCGGACGTTCTGTTTGTAGATGCCATGACGTTTTTTCTCTGGT GTTACGTTCGTTTTGCTTTGTTTTGCTTTGTTTTGCTTCGTTTCTGTCTC TATGCTTTCGTTGAAGCCGCAGCCCTTCGTTCAATCGTCCTTCGAATGCA GGCGCCCCGGTAGCCACACGTGTTTCTATTTTTGGAGATGTCGCTTTTTT CGAGTATTTCTTGTACCATTTC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1346:246356..249427-

>mRNA_F-serratus_M_contig1346.2574.1 ID=mRNA_F-serratus_M_contig1346.2574.1|Name=mRNA_F-serratus_M_contig1346.2574.1|organism=Fucus serratus male|type=CDS|length=2388bp|location=Sequence derived from alignment at F-serratus_M_contig1346:246356..249427- (Fucus serratus male)
ATGTGGGTGTCCCCCTTGCGAAAATATCTAGATAGGTGGCTCCTTGCTGT
CCTGATCTTCTCTGTTGAGAAAGCCACTATTTCCCAAGGCCGTTGGTCTG
ATGTTCTTGAGCCCGCCTACGATGAAGAGGTGGCGCTCGAGACCGTCAAG
TTGACCCAGATTGCTTATTGCACGGTGGAGCTCATTGACTGGGCCTGCAC
CGGCTGCCGAAATTTTCCAGGCATGAGGAACGTGACCCTTTTGGATGGGG
AACGGCGAAACATCCGTGGCTTTATTGGTGTTGACCTTGGTGTGAAGAGA
AAAGTTGCGGCAGCATACCAGTACGCTACTTCAACGTTGGACTTCGACCA
AAAGGCGTCCCAAGATTATCCTGTCAAGCGAGCTGTCGTTGCAGACCCCG
ACACTTTGCGAGGATATCAGCGTGATACCAGCAGGGGAAGAGACAATGCT
CCTAGACCGCGAATCGTTATTGCGTTTGCCGGGACTGATCCACTTAGCAT
CCAAAATATTTTGGACGATATCGAAGTGGCTGCTATCGATCAAGAATACG
GGGGAGAATGTGAAAAGTGCAAGGTTCATGAGGGTTTCGTCGCCTCGTAC
AAAGTTATCGAGGAACAGATGTGGGTGTCCCCCTTGCGAAAATATCTAGA
TAGGTGGCTCCTTGCTGTCCTGATCTTCTCTGTTGAGAAAGCCACTATTT
CCCAAGGCCGTTGGTCTGATGTTCTTGAGCCCGCCTACGATGAAGAGGTG
GCGCTCGAGACCGTCAAGTTGACCCAGATTGCTTATTGCACGGTGGAGCT
CATTGACTGGGCCTGCACCGGCTGCCGAAATTTTCCAGGCATGAGGAACG
TGACCCTTTTGGATGGGGAACGGCGAAACATCCGTGGCTTTATTGGTGTT
GACCTTGGTGTGAAGAGAAAAGTTGCGGCAGCATACCAGTACGCTACTTC
AACGTTGGACTTCGACCAAAAGGCGTCCCAAGATTATCCTGTCAAGCGAG
CTGTCGTTGCAGACCCCGACACTTTGCGAGGATATCAGCGTGATACCAGC
AGGGGAAGAGACAATGCTCCTAGACCGCGAATCGTTATTGCGTTTGCCGG
GACTGATCCACTTAGCATCCAAAATATTTTGGACGATATCGAAGTGGCTG
CTATCGATCAAGAATACGGGGGAGAATGTGAAAAGTGCAAGGTTCATGAG
GGTTTCGTCGCCTCGTACAAAGTTATCGAGGAACAGATTCGTGGTACGGT
TGCTCTTCACCTTCGTCGCAACCCCACCGCGGACGTGCTCATCACGGGCC
ATTCTCTCGGCGCAGCTTTGGCCACTCTATGCTTACTTGACTTGCGATTG
GCTCTCGACGCAAAGCTTTCCTTCGCGCCTCTTTACATCTATGGCTCCCC
CCGGGTGGGGAACGCCGCCTTCGCGACGTACTCTGCCTCGGTCGGGGTGC
CGATCTTCCGCGTGGTGCATCATCGTGACCCCGTACCTCACATACCGTTC
AAAACTTGGGGCTACGTTCACCCGCCGAGAGAAGTGTTTTACGATGATTC
CATGACAAGTTACGTTGTCTGTGATGGCAGCGGGGAGGATCCAACGTGTT
CGTATCGGTTCTTCTTCGCGGTCGATGTGTTTGCTGTTCGTGATCATCTC
ACCTACCTGGAGGTGGACTACTCGTTGGCATACCTCCAGTGCCAACTACT
AGACGCTGGCGAGGGAAGGTCAAATAATGAAGAGGAGGAGGCATTGGAAG
CAGCGAAGGCGGCGACCGTGCCAAGACTCGGTGAGGGAGGACCCCGATTC
CGTGTGAAATGAATTCGTGGTACGGTTGCTCTTCACCTTCGTCGCAACCC
CACCGCGGACGTGCTCATCACGGGCCATTCTCTCGGCGCAGCTTTGGCCA
CTCTATGCTTACTTGACTTGCGATTGGCTCTCGACGCAAAGCTTTCCTTC
GCGCCTCTTTACATCTATGGCTCCCCCCGGGTGGGGAACGCCGCCTTCGC
GACGTACTCTGCCTCGGTCGGGGTGCCGATCTTCCGCGTGGTGCATCATC
GTGACCCCGTACCTCACATACCGTTCAAAACTTGGGGCTACGTTCACCCG
CCGAGAGAAGTGTTTTACGATGATTCCATGACAAGTTACGTTGTCTGTGA
TGGCAGCGGGGAGGATCCAACGTGTTCGTATCGGTTCTTCTTCGCGGTCG
ATGTGTTTGCTGTTCGTGATCATCTCACCTACCTGGAGGTGGACTACTCG
TTGGCATACCTCCAGTGCCAACTACTAGACGCTGGCGAGGGAAGGTCAAA
TAATGAAGAGGAGGAGGCATTGGAAGCAGCGAAGGCGGCGACCGTGCCAA
GACTCGGTGAGGGAGGACCCCGATTCCGTGTGAAATGA
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