mRNA_F-serratus_M_contig1303.2282.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1303.2282.1 vs. uniprot
Match: D7FVA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVA2_ECTSI) HSP 1 Score: 176 bits (445), Expect = 4.260e-55 Identity = 84/109 (77.06%), Postives = 93/109 (85.32%), Query Frame = 1
Query: 1 FQTPRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLFYSAQE 327
FQTPRVNGAVL QFLG TVC+VGKV+S QEG +A+LETSDG +ITV + AGSTWTSQYVEVIGHLHE LQEFKSTDFGD FD+ YD AV+LMTGKFSYLFY+ QE
Sbjct: 4 FQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDMFDLRKYDEAVSLMTGKFSYLFYNPQE 112
BLAST of mRNA_F-serratus_M_contig1303.2282.1 vs. uniprot
Match: A0A7S2UTE4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTE4_9STRA) HSP 1 Score: 107 bits (267), Expect = 5.680e-28 Identity = 45/104 (43.27%), Postives = 76/104 (73.08%), Query Frame = 1
Query: 7 TPRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLFYS 318
TPR+NG++ + F+G+ VCLVGKV+ QE + A +++SDG + V +A GS++ + +VE++G + D +++EFKS D+G++FD+ LY++ + L GK+ LFYS
Sbjct: 11 TPRINGSLRQNFVGRPVCLVGKVLDVQENSGSAVIQSSDGSSVQVVMAPGSSYLTSFVEIVGEVLPDLSIKEFKSIDYGENFDLDLYNQVLQLANGKYQKLFYS 114
BLAST of mRNA_F-serratus_M_contig1303.2282.1 vs. uniprot
Match: A0A024UW39_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UW39_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.730e-22 Identity = 50/101 (49.50%), Postives = 66/101 (65.35%), Query Frame = 1
Query: 10 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 312
PRVN A+L QF+G TV LVG + S A L+TSD +TV G+ ++S+YVEVIG + D +L+EFK T FGD FD+ YD+ V L+ GK+S LF
Sbjct: 8 PRVNKAILAQFVGHTVSLVGSIESWT--GSQAVLKTSDNGFVTVHPQPGADYSSKYVEVIGSVQPDGSLKEFKCTSFGDDFDLKNYDKLVQLIHGKYSTLF 106
BLAST of mRNA_F-serratus_M_contig1303.2282.1 vs. uniprot
Match: A0A485KWY3_9STRA (Aste57867_12966 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWY3_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 5.640e-22 Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 10 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 312
PRVN AV+ Q++G+TV LVG + S A ++TSDG +TV G+ +TS++VEVIG + D +LQE+K T FGD FD+ YD+ V L+ GKF+ +F
Sbjct: 8 PRVNKAVMAQYIGRTVALVGSLESWTGSM--AVIKTSDGALVTVHPQPGADYTSKFVEVIGLVKPDGSLQEYKCTSFGDDFDLKNYDKLVHLIHGKFATMF 106
BLAST of mRNA_F-serratus_M_contig1303.2282.1 vs. uniprot
Match: A0A067CY70_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CY70_SAPPC) HSP 1 Score: 90.9 bits (224), Expect = 1.560e-21 Identity = 46/101 (45.54%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 10 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 312
PRVN A++ ++ +TV LVG + S + A ++ SDG +TV A G+ ++S+++EVIG + D +LQEFK T FGD+FD+G YD+ V LM GKF+ +F
Sbjct: 8 PRVNKALMASYVNRTVALVGSMESWTGNS--AIIKASDGGLVTVIPAPGADYSSKFIEVIGLVQPDGSLQEFKCTSFGDNFDLGNYDKLVTLMHGKFAPMF 106
BLAST of mRNA_F-serratus_M_contig1303.2282.1 vs. uniprot
Match: A0A6G0XXL0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXL0_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.140e-21 Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 10 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 312
PRVN A++ QF+G+TV LVG + S A ++TSDG +TV G+ ++S++VEVIG + D +L+E+K T FGD FD+ YD+ V L+ GKFS LF
Sbjct: 8 PRVNKAIMAQFVGRTVALVGSLESWTGSM--AVVKTSDGGLVTVHPQPGADYSSKFVEVIGLVQPDGSLKEYKCTSFGDDFDLKNYDKLVHLIHGKFSSLF 106
BLAST of mRNA_F-serratus_M_contig1303.2282.1 vs. uniprot
Match: A0A1W0ABE2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABE2_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 6.310e-21 Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 10 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 312
PRVN A + ++ +TV LVG + S +A +++SDG +TV + G+ ++S+YVEVIG + D ++QEFK T FGD FDM YD+ V L+ GKF+ +F
Sbjct: 8 PRVNKATMVNYINRTVALVGSMESWT--GSNAVIKSSDGGLVTVHPSPGADYSSKYVEVIGQVQHDGSIQEFKCTSFGDDFDMANYDKLVMLIHGKFAPMF 106
BLAST of mRNA_F-serratus_M_contig1303.2282.1 vs. uniprot
Match: A0A1V9ZKF2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKF2_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.550e-20 Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 10 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 312
PRVN A++ ++ +TV LVG + S + A ++ SDG +T+ + G+ ++S++VEVIG + D +LQEFK T +GD FD+ YD+ VALM GKF+ +F
Sbjct: 8 PRVNKALMAGYINRTVALVGSMESWTGNS--AVVKASDGGLVTIHPSPGADYSSKFVEVIGQVQPDGSLQEFKCTSYGDDFDLANYDKLVALMHGKFAPMF 106
BLAST of mRNA_F-serratus_M_contig1303.2282.1 vs. uniprot
Match: A0A8K1C3J4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3J4_PYTOL) HSP 1 Score: 86.7 bits (213), Expect = 8.090e-20 Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 1
Query: 10 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 312
PRVN + F+G+TV +VG V S A L TSDG + V GS ++S++VEVIG + +++TLQEFK+T FGD+FD+ YD+ V + KF +LF
Sbjct: 12 PRVNKKTMGSFVGRTVAIVGAVESHMPTA--VVLRTSDGGMVNVNPMPGSDYSSKFVEVIGRVVDNNTLQEFKTTLFGDNFDLETYDQFVQVAQSKFRHLF 110
BLAST of mRNA_F-serratus_M_contig1303.2282.1 vs. uniprot
Match: A0A484EA13_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA13_BRELC) HSP 1 Score: 84.3 bits (207), Expect = 6.370e-19 Identity = 47/103 (45.63%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 7 TPRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAE-LETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 312
+PRVN + ++G TV +VG V ++ +P A L TSDG + VT GS + S+ VEVIG + + TLQEFK+T FGD+FD+ +YD+ V L K+ YLF
Sbjct: 10 SPRVNKTTMGGYVGHTVAVVGTV---EKHSPTAVVLRTSDGGIVNVTPQPGSDYGSKVVEVIGRVVDSETLQEFKTTLFGDNFDLDVYDQFVQLSHSKYKYLF 109 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1303.2282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1303.2282.1 >prot_F-serratus_M_contig1303.2282.1 ID=prot_F-serratus_M_contig1303.2282.1|Name=mRNA_F-serratus_M_contig1303.2282.1|organism=Fucus serratus male|type=polypeptide|length=110bp FQTPRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAback to top mRNA from alignment at F-serratus_M_contig1303:10097..11922+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1303.2282.1 ID=mRNA_F-serratus_M_contig1303.2282.1|Name=mRNA_F-serratus_M_contig1303.2282.1|organism=Fucus serratus male|type=mRNA|length=1826bp|location=Sequence derived from alignment at F-serratus_M_contig1303:10097..11922+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1303:10097..11922+ >mRNA_F-serratus_M_contig1303.2282.1 ID=mRNA_F-serratus_M_contig1303.2282.1|Name=mRNA_F-serratus_M_contig1303.2282.1|organism=Fucus serratus male|type=CDS|length=660bp|location=Sequence derived from alignment at F-serratus_M_contig1303:10097..11922+ (Fucus serratus male)back to top |