prot_F-serratus_M_contig1300.2273.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1300.2273.1
Unique Name	prot_F-serratus_M_contig1300.2273.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	77

Homology

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BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A6H5JSI4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI4_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 7.490e-15
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0

Query:    3 DKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGR 68
            D V+LFW+PPSVFSQW  S   +    YSC EQFMM+ KA+LF D +++  I+   DP+ HK LGR
Sbjct:  138 DDVLLFWKPPSVFSQWTPSAFDILGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGR 203

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BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A6H5JMX2_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX2_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 9.960e-15
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0

Query:    3 DKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGR 68
            D V+LFW+PPSVFSQW  S   +    YSC EQFMM+ KA+LF D +++  I+   DP+ HK LGR
Sbjct:   92 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGR 157

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BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A6H5JDD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDD1_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.000e-14
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0

Query:    3 DKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGR 68
            D V+LFW+PPSVFSQW  S   +    YSC EQFMM+ KA+LF D +++  I+   DP+ HK LGR
Sbjct:   76 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGR 141

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BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A6H5JFD5_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD5_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.010e-14
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0

Query:    3 DKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGR 68
            D V+LFW+PPSVFSQW  S   +    YSC EQFMM+ KA+LF D +++  I+   DP+ HK LGR
Sbjct:  426 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGR 491

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BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A6H5K4L7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4L7_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.010e-14
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0

Query:    3 DKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGR 68
            D V+LFW+PPSVFSQW  S   +    YSC EQFMM+ KA+LF D +++  I+   DP+ HK LGR
Sbjct:  169 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGR 234

[Close]

BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A6H5K8W4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W4_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.020e-14
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0

Query:    3 DKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGR 68
            D V+LFW+PPSVFSQW  S   +    YSC EQFMM+ KA+LF D +++  I+   DP+ HK LGR
Sbjct:  593 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGR 658

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BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A6H5K6L2_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L2_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.020e-14
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0

Query:    3 DKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGR 68
            D V+LFW+PPSVFSQW  S   +    YSC EQFMM+ KA+LF D +++  I+   DP+ HK LGR
Sbjct:   76 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGR 141

[Close]

BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A6H5K165_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K165_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.030e-14
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 0

Query:    3 DKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGRQ 69
            D V+LFW+PPSVFSQW  S   +    YSC EQFMM+ KA+LF D +++  I+ T D + HK LGR+
Sbjct:  334 DDVLLFWKPPSVFSQWTPSAFDVPGVRYSCGEQFMMSEKAKLFGDMTSYDKIMATTDRKTHKFLGRK 400

[Close]

BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A6H5L323_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L323_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.030e-14
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 0

Query:    3 DKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGRQ 69
            D V+LFW+PPSVFSQW  S   +    YSC EQFMM+ KA+LF D +++  I+T  DP+ +K LGR+
Sbjct:   77 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMASYDKIMTATDPKTYKYLGRK 143

[Close]

BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A6H5JVW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW3_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.030e-14
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0

Query:    3 DKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGR 68
            D V+LFW+PPSVFSQW  S   +    YSC EQFMM+ KA+LF D +++  I+   DP+ HK LGR
Sbjct:   76 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGR 141

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JSI4_9PHAE	7.490e-15	53.03	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JMX2_9PHAE	9.960e-15	53.03	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5JDD1_9PHAE	1.000e-14	53.03	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JFD5_9PHAE	1.010e-14	53.03	NADAR domain-containing protein (Fragment) n=1 Tax...	[more]
A0A6H5K4L7_9PHAE	1.010e-14	53.03	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K8W4_9PHAE	1.020e-14	53.03	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5K6L2_9PHAE	1.020e-14	53.03	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5K165_9PHAE	1.030e-14	52.24	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5L323_9PHAE	1.030e-14	52.24	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JVW3_9PHAE	1.030e-14	53.03	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012816	NADAR	PFAM	PF08719	DUF1768	coord: 8..70 e-value: 3.8E-12 score: 46.7
IPR037238	YbiA-like superfamily	GENE3D	1.10.357.40		coord: 1..76 e-value: 2.6E-7 score: 32.2
IPR037238	YbiA-like superfamily	SUPERFAMILY	143990	YbiA-like	coord: 2..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1300	contig	F-serratus_M_contig1300:211968..212198 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1300.2273.1	mRNA_F-serratus_M_contig1300.2273.1	Fucus serratus male	mRNA	F-serratus_M_contig1300 211968..212438 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1300.2273.1 ID=prot_F-serratus_M_contig1300.2273.1|Name=mRNA_F-serratus_M_contig1300.2273.1|organism=Fucus serratus male|type=polypeptide|length=77bp
MDDKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSST
FSAILTTDDPREHKGLGRQSSTPLRS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012816	NADAR
IPR037238	YbiA-like_sf