mRNA_F-serratus_M_contig1300.2273.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: D7FYJ3_ECTSI (NADAR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ3_ECTSI) HSP 1 Score: 147 bits (370), Expect = 2.080e-41 Identity = 74/153 (48.37%), Postives = 97/153 (63.40%), Query Frame = 1
Query: 13 VVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGRQSSTPLRS*LVVARTKNIALRSNLAKFSQNNDLRLTLLHTGDRRLTEASPYDNIWGISLRASDYRASSPIMWRGSNLLGQTLEQVRNTL 471
++ FWQPPSVFSQW S +D +YSC EQ+MM KA+LF D+S++ I+ T PREHK LGR S ++ + I R N AKF+QN + LL TG++ L EASPYD +WGI LRA + A +P WRG NLLG L++VR +
Sbjct: 60 LLFFWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMATPSPREHKDLGRGVSGYDQN-VWDQHKMRIVARGNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSWRGQNLLGDILQEVRTRM 211
BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A6J8EGL8_MYTCO (NADAR domain-containing protein n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8EGL8_MYTCO) HSP 1 Score: 132 bits (333), Expect = 1.120e-35 Identity = 71/154 (46.10%), Postives = 93/154 (60.39%), Query Frame = 1
Query: 16 VLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGRQSST--PLRS*LVVARTKNIALRSNLAKFSQNNDLRLTLLHTGDRRLTEASPYDNIWGISLRASDYRASSPIMWRGSNLLGQTLEQVRNTL 471
VLFWQ SVFSQW HS T++ ++C EQFMM K RL DD ++T+ DP E K LGRQ++ L ++ + I + N+AKFSQN L+ LL+TG++ L EASP+D WGI L A + A + WRG+NLLG L VR L
Sbjct: 81 VLFWQKGSVFSQWHHSVFTVEELTFNCAEQFMMYHKTRLCDDEKLTERVMTSTDPEEQKDLGRQAAKLPSFNRPLWNSKCEEIVKQGNIAKFSQNPKLKAVLLNTGNKTLAEASPFDEKWGIGLAADNPDALNKEKWRGTNLLGTILMDVRGEL 234
BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A5S9INE9_9BACT (NADAR domain-containing protein n=1 Tax=Candidatus Uabimicrobium amorphum TaxID=2596890 RepID=A0A5S9INE9_9BACT) HSP 1 Score: 130 bits (328), Expect = 1.380e-35 Identity = 70/157 (44.59%), Postives = 87/157 (55.41%), Query Frame = 1
Query: 1 MDDKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGRQSSTPLRS*LVVARTKNIALRSNLAKFSQNNDLRLTLLHTGDRRLTEASPYDNIWGISLRASDYRASSPIMWRGSNLLGQTLEQVRNTL 471
+ D VLFW+PP F QW S +D Y+C EQ+MM KARLF D I+ +D PRE K LG++ + R I R N+AKFSQN DL+ LL T +R L EASP D IWGI A+ A W G NLLG+ L++VR L
Sbjct: 25 VSDSFVLFWKPPCAFGQWTLSPFEVDGVHYNCAEQYMMAEKARLFQDEKNEKLIMESDCPREQKKLGKRVRGFKEKTWLEERFA-IVFRGNMAKFSQNLDLKQALLETENRTLVEASPLDKIWGIGFAANQEEAYDETKWNGLNLLGKVLQEVRQEL 180
BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: UPI00148A748D (uncharacterized protein LOC105329780 isoform X1 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A748D) HSP 1 Score: 135 bits (340), Expect = 1.110e-34 Identity = 73/155 (47.10%), Postives = 91/155 (58.71%), Query Frame = 1
Query: 7 DKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGRQSSTPLRS*LVVARTKNIALRSNLAKFSQNNDLRLTLLHTGDRRLTEASPYDNIWGISLRASDYRASSPIMWRGSNLLGQTLEQVRNTL 471
DK FWQ SVFSQW S+ +D EYSC EQ+MM KA L DD T I+ D P E K GR ++ L I + N+AKFSQN+DL++TL T + L EASPYD +WGI LR +D RA + W G NLLG+ L +VR+ L
Sbjct: 326 DKFEYFWQKESVFSQWYPSKFVVDGVEYSCAEQYMMQQKAILMDDMETADIIMALDAPNEMKQYGRYVKNFSQT-LWDQHCTRIVEKGNIAKFSQNDDLKMTLFSTYPKTLVEASPYDKVWGIGLRQNDRRAWNKSTWLGKNLLGEILTRVRDKL 479
BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A371YUE5_9GAMM (NADAR family protein n=1 Tax=Acinetobacter sichuanensis TaxID=2136183 RepID=A0A371YUE5_9GAMM) HSP 1 Score: 127 bits (319), Expect = 2.990e-34 Identity = 73/160 (45.62%), Postives = 92/160 (57.50%), Query Frame = 1
Query: 10 KVVLFWQ---------PPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGRQSSTPLRS*LVVARTKNIALRSNLAKFSQNNDLRLTLLHTGDRRLTEASPYDNIWGISLRASDYRASSPIMWRGSNLLGQTLEQVR 462
K + FW+ S FSQW S+ +D +Y EQ+MM KA+LF D + IL T DP+E K LGR S + R NI ++ NLAKFSQN DL+ LL+TG+R L EASP D IWGI L A D +A P+ W+G NLLG L +VR
Sbjct: 21 KYLCFWEHIPKQKTVIDKSCFSQWFPSKFEVDGVQYKNTEQYMMAQKAKLFGDDEILNKILRTADPKEIKVLGRLVKGYQESVWLEHRF-NIVVQGNLAKFSQNEDLKQFLLNTGERVLVEASPVDKIWGIGLSAEDEKAEKPLQWKGLNLLGFALMEVR 179
BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A7U7S1X5_LISMN (NADAR family protein n=2 Tax=Listeria TaxID=1637 RepID=A0A7U7S1X5_LISMN) HSP 1 Score: 124 bits (310), Expect = 4.990e-33 Identity = 70/163 (42.94%), Postives = 89/163 (54.60%), Query Frame = 1
Query: 10 KVVLFWQPPS---------VFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGRQSSTPLRS*LVVARTKNIALRSNLAKFSQNNDLRLTLLHTGDRRLTEASPYDNIWGISLRASDYRASSPIMWRGSNLLGQTLEQVRNTL 471
K + FW S FSQW +D EY+C EQFMM KA+LF+D+ IL P++ K GR S + + + NI R NLAKFSQN DL+ LLHT +R L EASP D +WGI L + D A +P+ W+G NLLG L VR+ L
Sbjct: 8 KYIFFWGNQSSSDGSINKSYFSQWWKCNFKVDGVEYNCAEQFMMAEKAKLFNDTEMRGEILAAKHPKQAKSFGRLISG-FQEDVWMENRFNIVKRGNLAKFSQNKDLKNFLLHTNNRILVEASPLDKVWGIGLASDDKHAENPLHWKGLNLLGFALMAVRDEL 169
BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A8G0V2A4_9BURK (NADAR family protein n=1 Tax=Cupriavidus pinatubonensis TaxID=248026 RepID=A0A8G0V2A4_9BURK) HSP 1 Score: 127 bits (319), Expect = 9.000e-33 Identity = 70/150 (46.67%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 22 FWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGRQSSTPLRS*LVVARTKNIALRSNLAKFSQNNDLRLTLLHTGDRRLTEASPYDNIWGISLRASDYRASSPIMWRGSNLLGQTLEQVRNTL 471
F+Q S FS W + +D +++C+EQ++M +KA LF D T +IL+T DPR+ K LGRQ S + S + R +IA LAKFSQN LR LL T L EASPYD IWG+ L A+D R + WRG NLLG+ L +VR L
Sbjct: 116 FFQGTSPFSNWHKAAFVVDGKKFNCVEQYLMYAKATLFSDDDTVGSILSTPDPRQQKALGRQVSGFVESVWIENRV-SIARTGVLAKFSQNPHLREALLGTAGTELVEASPYDKIWGVGLPATDPRINDRSQWRGENLLGKILTEVREHL 264
BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A6H5L3B4_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3B4_9PHAE) HSP 1 Score: 128 bits (322), Expect = 9.380e-33 Identity = 72/157 (45.86%), Postives = 93/157 (59.24%), Query Frame = 1
Query: 7 DKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGRQSSTPLRS*LVVARTKNIALRSNLAKFSQNNDLRLTLLHTGDRRLTEASPYDNIWGISLRASDYRASSPIMWR--GSNLLGQTLEQVRNTL 471
D V+LFW+PPSVFSQW S + YSC EQFMM+ KA+LF D +++ I+ DP+ HK LGR + P R + I L + AKF+QN+D++ LL TG R L EASP+D WGI + A AS W G NLLG+ L +VR L
Sbjct: 76 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDLTSYDKIMAATDPKTHKFLGR-NVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRFWGIGMSACFPDASVSSKWAASGKNLLGKALMEVRRLL 231
BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A0M8YFS2_9PSEU (NADAR domain-containing protein n=2 Tax=Saccharothrix sp. NRRL B-16348 TaxID=1415542 RepID=A0A0M8YFS2_9PSEU) HSP 1 Score: 122 bits (306), Expect = 1.600e-32 Identity = 71/161 (44.10%), Postives = 87/161 (54.04%), Query Frame = 1
Query: 16 VLFWQPPS---------VFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGRQSSTPLRS*LVVARTKNIALRSNLAKFSQNNDLRLTLLHTGDRRLTEASPYDNIWGISLRASDYRASSPIMWRGSNLLGQTLEQVRNTL 471
+ FW+P + SQW T+D Y E FMM KARLF D T +L PRE K LGRQ + VAR ++ +R N+AKF ++D R LL TGDR L EASP D +WGI L A D RA+ P WRG NLLG+ L +VR L
Sbjct: 1 MFFWKPDARPGAPVGEECLSQWWEGPFTVDGLTYRTAEHFMMWGKARLFGDEHTARRVLAARTPREAKALGRQVRG-FDEDVWVARRLDVVVRGNVAKFDAHHDAREFLLATGDRVLVEASPLDRVWGIGLAADDERAADPAAWRGLNLLGEALVEVRARL 160
BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Match: A0A6H5JDD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDD1_9PHAE) HSP 1 Score: 130 bits (328), Expect = 1.820e-32 Identity = 72/157 (45.86%), Postives = 94/157 (59.87%), Query Frame = 1
Query: 7 DKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTFSAILTTDDPREHKGLGRQSSTPLRS*LVVARTKNIALRSNLAKFSQNNDLRLTLLHTGDRRLTEASPYDNIWGISLRASDYRASSPIMWR--GSNLLGQTLEQVRNTL 471
D V+LFW+PPSVFSQW S + YSC EQFMM+ KA+LF D +++ I+ DP+ HK LGR + P R + I L + AKF+QN+D++ LL TG R L EASP+D +WGI + A AS W G NLLG+ L +VR L
Sbjct: 76 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGR-NVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMSACFPDASDSSKWAASGKNLLGKALMEVRRLL 231 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1300.2273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1300.2273.1 >prot_F-serratus_M_contig1300.2273.1 ID=prot_F-serratus_M_contig1300.2273.1|Name=mRNA_F-serratus_M_contig1300.2273.1|organism=Fucus serratus male|type=polypeptide|length=77bp MDDKVVLFWQPPSVFSQWIHSQCTLDLAEYSCIEQFMMTSKARLFDDSSTback to top mRNA from alignment at F-serratus_M_contig1300:211968..212438+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1300.2273.1 ID=mRNA_F-serratus_M_contig1300.2273.1|Name=mRNA_F-serratus_M_contig1300.2273.1|organism=Fucus serratus male|type=mRNA|length=471bp|location=Sequence derived from alignment at F-serratus_M_contig1300:211968..212438+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1300:211968..212438+ >mRNA_F-serratus_M_contig1300.2273.1 ID=mRNA_F-serratus_M_contig1300.2273.1|Name=mRNA_F-serratus_M_contig1300.2273.1|organism=Fucus serratus male|type=CDS|length=462bp|location=Sequence derived from alignment at F-serratus_M_contig1300:211968..212438+ (Fucus serratus male)back to top |