mRNA_F-serratus_M_contig972.21055.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 260 bits (664), Expect = 8.030e-79 Identity = 153/428 (35.75%), Postives = 228/428 (53.27%), Query Frame = 1 Query: 148 EKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGC-------------------------------------GLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDMQKF 1320 E Y+PT A +S+ L AM ++ LRHFD + F+++D+DE++++ +PE G + +LNK++ G +A R W++ + +G Q AD CVFR + +G + L V+VDDI + +++ D+F L V +K++GD +Y GC R+ A LK+ Q Y E + F V+ IP G+ LS+ ++ EE+ +P+RE +G+LMW AT T PDIA AVRA GL MEV+ D D+ + RR+VSG +++ G ISW SR Q+ T AEY +L++V+ EVLFLRQV FM P + + FEDN GAI LA N I++ +KHIDV+HH +R+ +++ + +V S QHAD LTK L F Sbjct: 10 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEF------DQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNP--ISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDF 427
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 260 bits (664), Expect = 6.600e-77 Identity = 153/428 (35.75%), Postives = 228/428 (53.27%), Query Frame = 1 Query: 148 EKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGC-------------------------------------GLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDMQKF 1320 E Y+PT A +S+ L AM ++ LRHFD + F+++D+DE++++ +PE G + +LNK++ G +A R W++ + +G Q AD CVFR + +G + L V+VDDI + +++ D+F L V +K++GD +Y GC R+ A LK+ Q Y E + F V+ IP G+ LS+ ++ EE+ +P+RE +G+LMW AT T PDIA AVRA GL MEV+ D D+ + RR+VSG +++ G ISW SR Q+ T AEY +L++V+ EVLFLRQV FM P + + FEDN GAI LA N I++ +KHIDV+HH +R+ +++ + +V S QHAD LTK L F Sbjct: 184 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEF------DQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNP--ISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDF 601
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 254 bits (649), Expect = 8.360e-74 Identity = 152/457 (33.26%), Postives = 243/457 (53.17%), Query Frame = 1 Query: 61 KIGQDGKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCME-------------------------------------VYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDMQKF 1320 K + GK+ K K RLVA+GF Q GV + E +SPT+ AASI ++A+ + EL H D E F ++ +D E+ +++P G + RLNK++ G +A R + + D+ IG Q+ +DPCV R ++ E ++A++VDDIL +A + + LG + K++G+ +++GC +R+R+A +++ Q Y+ + +RF++ + ++IPA S A + R+ E EE P+RE VG LMW A T P+ + AVR E VY D DF + RR+VSGA++++A +SW S Q+ + T AEY + + V E LF+ + + + P + +D FEDN GAI LA N ++S R+KHIDV+HH +R+ ++ + V +V S++QHAD+LTK L F Sbjct: 267 KADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDIL-YAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPA-------SPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENP--LSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLF 713
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 258 bits (658), Expect = 1.770e-73 Identity = 154/457 (33.70%), Postives = 249/457 (54.49%), Query Frame = 1 Query: 61 KIGQDGKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCME-------------------------------------VYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDMQKF 1320 K + GK+ K K RLVA+GF Q GV + E +SPT+ AAS ++A+ + EL H+D E F+++++D E+++++P G V RLNK++ G +A R + + ++ IG Q+ +DPCV R ++ E ++A++VDDIL +A ++ + LG + K++G+ +++GC R+R+A +++ Q Y+ + +RF+V + ++IPA+ PT R+ E E P+RE VG+LMW A T PDI+ AVRA E VY D DF + + RR+VSGA++++A + W S+ Q+ + T AEY + + V E LF+ + +F+ P + +D EDN GAI LA N ++S R+KHIDV+HH +R+ ++ + V +V SE+QHAD+LTK L F Sbjct: 502 KADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPAS---PTNDY----RSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENP--LSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLF 948
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 258 bits (660), Expect = 4.380e-73 Identity = 152/428 (35.51%), Postives = 228/428 (53.27%), Query Frame = 1 Query: 148 EKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGC-------------------------------------GLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDMQKF 1320 E Y+PT A +S+ L AM ++ LRHFD + F+++D+DE++++ +PE G + +LNK++ G +A R W++ + +G Q AD CVFR + +G + L V+VDDI + +++ D+F L V +K++GD +Y GC R+ A LK+ Q Y E + F V+ IP G+ LS+ ++ EE+ +P+RE +G+LMW AT T PDIA AVRA GL MEV+ D D+ + RR+VSG +++ G ISW SR Q+ T AEY +L++V+ EVLFLRQV FM P + + FEDN GAI LA N I++ +KHIDV+HH +R+ +++ + +V S QHA+ LTK L F Sbjct: 705 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEF------DQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNP--ISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDF 1122
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE) HSP 1 Score: 258 bits (660), Expect = 1.390e-72 Identity = 158/457 (34.57%), Postives = 244/457 (53.39%), Query Frame = 1 Query: 61 KIGQDGKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCME--------------------------------------VYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDMQK 1317 K + GK+ K K RLVA+GF Q GV + E +SPT+ AASI L+A+ D EL H+D E F+++ +D E+++++P G V RLNK++ G +A R + + D+ IG Q+ +DPCV R ++ E ++A++VDDIL +A ++ LG + K++G+ +++GC R+R+A +++ Q Y+ + +RF + + ++IPA S A + R+ E EE P+RE VG LMW A T PDI+ AVRA E VY D DF + RR+VSGA++I+A ++W S Q+ + T AEY + + V E LF+ + +F+ P +D EDN GAI LA N ++S R+KHIDV+HH +R+ ++ + + +V SE QHAD+LTK L K Sbjct: 834 KADETGKIVKAKARLVAKGFRQKYGVDYLETFSPTANAASIRLLVALACKYDLELLHWDIEQAFVQSKLDHEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSDLKRIGFEQSLSDPCVLRFMMGDEVLGMVAIHVDDIL-YAGTKSLAKVVVEALGDSLPTKNLGEVKFFLGCAFIRDREAGTIEISQESYIRSVLERFKICRTSSIPA-------SPANDNRSVMEDEEAGDVPFREVVGCLMWVANGTRPDISNAVRAVARHSHEPKKRDWKAAQKILNYLLATAHLTLKYKRDSTVDDVGTLVYVDADFASKATDRRSVSGALVIVAACLVAWLSWTQKCVSQSTSEAEYLAMGDGVKESLFVNGMLQFLRPSVEPRKIDVLEDNEGAIALAENP--LSSCRSKHIDVRHHFLRNLTEEGVIEITHVPSEKQHADILTKALPRSK 1280
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 258 bits (658), Expect = 1.620e-72 Identity = 154/457 (33.70%), Postives = 249/457 (54.49%), Query Frame = 1 Query: 61 KIGQDGKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCME-------------------------------------VYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDMQKF 1320 K + GK+ K K RLVA+GF Q GV + E +SPT+ AAS ++A+ + EL H+D E F+++++D E+++++P G V RLNK++ G +A R + + ++ IG Q+ +DPCV R ++ E ++A++VDDIL +A ++ + LG + K++G+ +++GC R+R+A +++ Q Y+ + +RF+V + ++IPA+ PT R+ E E P+RE VG+LMW A T PDI+ AVRA E VY D DF + + RR+VSGA++++A + W S+ Q+ + T AEY + + V E LF+ + +F+ P + +D EDN GAI LA N ++S R+KHIDV+HH +R+ ++ + V +V SE+QHAD+LTK L F Sbjct: 769 KADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPAS---PTNDY----RSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENP--LSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLF 1215
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 251 bits (642), Expect = 3.070e-70 Identity = 150/457 (32.82%), Postives = 246/457 (53.83%), Query Frame = 1 Query: 61 KIGQDGKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCME-------------------------------------VYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDMQKF 1320 K + GK+ K K RLVA+GF Q GV + E +SPT+ AAS ++A+ + EL H+D E F+++++D E+++++P V RLNK++ G +A R + + ++ IG Q+ +DPCV R ++ E ++A++VDDIL +A ++ + LG + K++G+ +++GC R+RKA +++ Q Y+ + +RF++ + ++IPA+ + R+ E+E P+RE VG+LMW A+ T DI+ AVRA E VY D DF + RR+VSGA++ +A + W SR Q+ + T AEY + + V E LF+ + +F+ P + +D EDN GAI LA N ++S R+KHIDV+HH +R+ ++ + V +V S++QHAD+LTK L F Sbjct: 943 KADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNN-------DDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENP--LSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLF 1389
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.050e-69 Identity = 150/450 (33.33%), Postives = 232/450 (51.56%), Query Frame = 1 Query: 61 KIGQDGKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRA-----------------------------------GCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPL 1305 K ++GK+ +K RLVA+GF Q+ V + SP ++ASI +LA+ K L H+D + + A +DEE+++++P + + + +AI G ++GR W + + G Q KADPCVFRK+VD M++ +YVDDIL D+ + A+ L +K K++G+ ++ GC I R+ +A L++ Q Y++ + +RFDVK + IPA G K E EE ++P RE +G++MW +T + PD++ AVRA G GL + VY D + D RR+VSG + +S S+ Q + + + AEY E V E LF+R V F+ P ++ EDN GAI L N ++S RTKHIDV++H +R + + V +V + +QHADLLTK L Sbjct: 791 KTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNP--LSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1229
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.600e-69 Identity = 150/450 (33.33%), Postives = 232/450 (51.56%), Query Frame = 1 Query: 61 KIGQDGKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRA-----------------------------------GCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPL 1305 K ++GK+ +K RLVA+GF Q+ V + SP ++ASI +LA+ K L H+D + + A +DEE+++++P + + + +AI G ++GR W + + G Q KADPCVFRK+VD M++ +YVDDIL D+ + A+ L +K K++G+ ++ GC I R+ +A L++ Q Y++ + +RFDVK + IPA G K E EE ++P RE +G++MW +T + PD++ AVRA G GL + VY D + D RR+VSG + +S S+ Q + + + AEY E V E LF+R V F+ P ++ EDN GAI L N ++S RTKHIDV++H +R + + V +V + +QHADLLTK L Sbjct: 1170 KTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNP--LSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1608 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig972.21055.1 >prot_F-serratus_M_contig972.21055.1 ID=prot_F-serratus_M_contig972.21055.1|Name=mRNA_F-serratus_M_contig972.21055.1|organism=Fucus serratus male|type=polypeptide|length=210bp MVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNback to top mRNA from alignment at F-serratus_M_contig972:213256..214683+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig972.21055.1 ID=mRNA_F-serratus_M_contig972.21055.1|Name=mRNA_F-serratus_M_contig972.21055.1|organism=Fucus serratus male|type=mRNA|length=1428bp|location=Sequence derived from alignment at F-serratus_M_contig972:213256..214683+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig972:213256..214683+ >mRNA_F-serratus_M_contig972.21055.1 ID=mRNA_F-serratus_M_contig972.21055.1|Name=mRNA_F-serratus_M_contig972.21055.1|organism=Fucus serratus male|type=CDS|length=1260bp|location=Sequence derived from alignment at F-serratus_M_contig972:213256..214683+ (Fucus serratus male)back to top |