prot_F-serratus_M_contig972.21055.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig972.21055.1
Unique Nameprot_F-serratus_M_contig972.21055.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length210
Homology
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A438CDC4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CDC4_VITVI)

HSP 1 Score: 108 bits (270), Expect = 1.050e-24
Identity = 68/205 (33.17%), Postives = 102/205 (49.76%), Query Frame = 0
Query:    1 MVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKAT--NIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCMEV--YTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLR 201
            ++L +YVDDIL  + D   +      L  K  +KD+GDA + +G  I R+     L L Q  Y++ +  RF +      N+P A G    S    P+N  EK++M +FPY   +G+L+                     +E+  Y+D DF  CLD +R+ SG V +LA+GA+SW S  Q + AS T  AE+    E  N  ++LR
Sbjct:  149 IILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGDASFMLGIQIYRDHSRGILGLSQKAYIDKVLSRFGMSNCAPGNMPVAKG-DKFSLHQCPKNELEKKDMERFPYASVIGSLISNH------------------LEIVRYSDSDFIGCLDSKRSTSGYVFMLARGAVSWKSVKQTLIASSTMEAEFIVCYETSNHGIWLR 334          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5KGX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGX4_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 7.110e-24
Identity = 64/188 (34.04%), Postives = 97/188 (51.60%), Query Frame = 0
Query:   22 RFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP 209
            +    L + V + ++G+  +Y GC   R ++   L + Q  + + +A  + V    ++P ++GV  LS        +  E    +P+RE VG+LMW AT T PDIA A +       + Y D DF +    RR+VSG ++    GA+SW  R Q+     T  AE+  L EVV E+LFLRQ+  FM P
Sbjct:  518 KLGKSLHKSVPVTNLGEFRWYSGCLYEREKETGRLTISQQTFTDELAAEYGVVGGKSVPMSSGV-KLSDF------DADEVATDYPFRELVGSLMWLATQTRPDIANARKGS----SKGYADADFASKAADRRSVSGRIVTCRGGAVSWIPRTQKCVTLSTTEAEHVALGEVVEEILFLRQIWRFMLP 694          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A2N9EMX8_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EMX8_FAGSY)

HSP 1 Score: 108 bits (269), Expect = 1.050e-23
Identity = 68/198 (34.34%), Postives = 104/198 (52.53%), Query Frame = 0
Query:    8 DDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVP-TLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVR--AGCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQ 202
            DD+L   +D   +      L +   +KD+G A   +G  I  +RKA++L L Q  Y+E + +RF++K A  +    G    LSK   P + +EKE M   PY   V +LM+    T PDIA AV   +     +E Y D D    LD R++ SG +   A+GA+SW S++Q+  A  T  AEY   +E   E+L++++
Sbjct:  329 DDMLIVGQDANMVGSLKKELFKSFDMKDLGPARQILGMQILHDRKAKKLWLSQEKYVERVLERFNMKYAKPVSTPLGGHFKLSKKSCPSSNKEKENMASIPYSSAVRSLMYVMVCTRPDIAHAVGVVSSSKSVLEGYIDADMVGDLDGRKSTSGFLFTFARGAVSWQSKLQKCVALSTTEAEYIAETEAGKEMLWMKR 526          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A2P4YHT5_9STRA (RxLR effector candidate protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHT5_9STRA)

HSP 1 Score: 103 bits (258), Expect = 6.050e-23
Identity = 68/217 (31.34%), Postives = 112/217 (51.61%), Query Frame = 0
Query:    2 VLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACA-------VRAGCGLCMEV--------YTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQV 203
            ++ VYVDD++  ++ +  +      L  +  +K++GD  Y +G  I R R+   + ++Q  Y++ +A++F V K  ++   A   + +K ++P   E++  + K+PYRE VGALM+ AT T PDIA A            GL            Y D ++   LD RR+ +G V  L   AISW S+ Q   A+ +  AEY  L   + E ++LRQ+
Sbjct:   47 IVIVYVDDLMIFSRTKDDIAEIKEALRSEFSIKELGDLKYCLGIEIHRKREM--IVMNQRAYIKRLAEKFGVDKCKDVYTPAD--SSAKLMKPS--EDEYFVAKYPYRELVGALMYLATSTRPDIAYARVLKYLKTTQDVGLVFNGGIKGELVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQL 257          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A1Y1IVX6_KLENI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVX6_KLENI)

HSP 1 Score: 104 bits (259), Expect = 3.020e-22
Identity = 70/237 (29.54%), Postives = 117/237 (49.37%), Query Frame = 0
Query:    3 LAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVK--KATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAV---------------RAGCGLCMEV-------------------YTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQV 203
            + V+VDDIL  AK +  + +    L +K  ++D+G A Y++G  +TR+R+AR +KL Q    + +  R+ ++  KA + P ++G   L +  +P       +  K+PY E VG+L++ +  T PDIA AV               RA  G+   +                   Y D D+   +D RR+ +G V ++  GA SW SR+Q   A+ T  AEY + +    E L+L+++
Sbjct:  753 VVVWVDDILIAAKGEQRLAKVKAHLSEKFDVRDLGPAEYFLGMELTRDRRARTIKLTQKKLTKELLGRYGLEAAKARSTPLSSGE-KLQREGDPL------DTGKYPYSELVGSLLYLSVCTRPDIAQAVGALARYMAGPTEEHWRAALGVARYLSGTAELGVTFGGSAEPLVGYADADYAGDVDSRRSTTGYVFLVYGGAASWSSRLQPTVAASTVEAEYMSAASAAKEALWLKKL 982          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A1Y1IQX0_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQX0_KLENI)

HSP 1 Score: 104 bits (259), Expect = 3.120e-22
Identity = 71/237 (29.96%), Postives = 117/237 (49.37%), Query Frame = 0
Query:    3 LAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVK--KATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAV---------------RAGCGLCMEV-------------------YTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQV 203
            + V+VDDIL  A  +  + +    L +K  ++D+G A Y++G  +TR+R+AR +KL Q    + +  R++++  KA + P ++G   L K  +P       +  K+PY E VG+L++ +  T PDIA AV               RA  G+   +                   Y D D+   +D RR+ +G V ++  GA SW SR+Q   A+ T  AEY + +    E L+LR++
Sbjct: 1028 VVVWVDDILIAAAGEKRLAKVKAHLSRKFDVRDLGPAEYFLGMELTRDRRARTVKLTQKKLTKELLGRYELEAAKARSTPLSSGE-KLQKEGDPL------DTGKYPYSELVGSLLYLSVCTRPDIAQAVGALARYMSGPTQEHWRAALGVVRYLSGTAELGVTFGGSAEPLVGYADADYAGDVDSRRSTTGYVFLVYGGAASWSSRLQPTVAASTVEAEYMSAASAAKEALWLRKL 1257          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A2N9G942_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9G942_FAGSY)

HSP 1 Score: 99.8 bits (247), Expect = 1.230e-20
Identity = 66/182 (36.26%), Postives = 93/182 (51.10%), Query Frame = 0
Query:   27 LGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATN--IPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQ-VQE 205
            L     +KD+G+A Y +G  + R+RK R L L Q  Y++ I  RF ++ +    +P   GV  LSK + P   EE+E+MR  PY   VG+LM+    T P           LC E Y        +D R+++SG V  L KGAISW    Q+ TA  T   EY   SE   E +++R+ +QE
Sbjct:  939 LSSHFAMKDLGEASYILGIKLFRDRKKRLLGLSQVNYIDKILARFSMQDSKKGFLPFKHGV-HLSKKMCPNTQEEREQMRNCPYASAVGSLMYAMLCTRPRHL--------LCSEHY--------IDHRKSISGFVFTLGKGAISWRRCKQDTTADSTTEVEYIAASEAAKEAVWIRKFIQE 1103          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A1Y1IC23_KLENI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IC23_KLENI)

HSP 1 Score: 99.0 bits (245), Expect = 1.530e-20
Identity = 70/236 (29.66%), Postives = 110/236 (46.61%), Query Frame = 0
Query:    3 LAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRA----------------------------------GCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYA-TLSEVVNEVLFLRQV 203
            L V+VDDIL   + +  + +    L +   ++D+G+A Y++G  + R+R+AR LKL Q      +  R  +  A   P +  + T  K      P +     KFPY E +G+L++ +  T PDIA AV A                                  G    +EV+ D DF   +DMRR+ +G V ++  GA+SW SR+Q   A  T  AEY  + ++ V E L+ R++
Sbjct:  174 LLVWVDDILIAIRGKDRVAKVKAHLARTFDVRDLGEATYFLGSELARDREARTLKLTQKRQTGELLGRHGLAGAR--PRSVPLGTAGKLTREGTPLDTA---KFPYSELIGSLLYLSVCTRPDIAQAVGALARYTSAPTEAHWAAALGVVRYLAGTAEAGVTFGGSDELLEVFCDADFAGDVDMRRSTTGYVFLMYGGAVSWSSRLQPTVAVSTVEAEYTVSAAQAVKEALWFRKL 404          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A2N9EWE6_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EWE6_FAGSY)

HSP 1 Score: 98.6 bits (244), Expect = 1.710e-20
Identity = 69/205 (33.66%), Postives = 101/205 (49.27%), Query Frame = 0
Query:    6 YVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRF---DVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQ-VQEF 206
            Y+ + +   +    M      L     +KD+G+A Y +   + R+RK R L L Q  Y++ I  RF   D KK  + P   GV  LSK +  +  EE+E+MR  PY   +G+LM+    T PDI                   + + +D R+++SG V  L KGAISW S  Q+ TA  T  AEY   SE   E +++R+ +QEF
Sbjct:  184 YIREEIYMDQSVGAMSSIKMWLSSHFAMKDLGEASYILRIKLFRDRKKRLLGLSQVNYIDKILARFSMQDSKKGFS-PFRHGV-RLSKKMCSKTQEEREKMRNCPYALAIGSLMYAMLCTRPDIC------------------YASDIDDRKSISGFVFTLGKGAISWRSCKQDTTADSTTEAEYIAASEAAKEAVWIRKFIQEF 368          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A2N9FAH4_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FAH4_FAGSY)

HSP 1 Score: 95.9 bits (237), Expect = 2.740e-19
Identity = 66/205 (32.20%), Postives = 100/205 (48.78%), Query Frame = 0
Query:    1 MVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVP-TLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCME-----------VYTDL-DFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSE 192
            ++L +YVDD+L   +D   +      L +   +KD+G A   +G  I  + KA++L L Q  Y+E + +RF++K A  +    G    L K   P   +EKE M   PY  TVG+LM+    T PDIA AV       +            ++  L D    LD R++ SG +   A+GA+SW S++Q+  A  T   EY   +E
Sbjct: 1457 IILLLYVDDMLIVGQDANMVGSLKKELFKSFDMKDLGPARQILGMQILCDGKAKKLWLSQEKYVERVLERFNMKHAKLVSTPLGGHFKLGKKSCPSLNKEKENMASIPYSSTVGSLMYVMVCTRPDIAHAVGVVSRFMVNPGKEHWEAVKWIFRYLRDMVGDLDGRKSTSGFLFTFARGAVSWQSKLQKCVALSTTEVEYIAATE 1661          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438CDC4_VITVI1.050e-2433.17Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KGX4_9PHAE7.110e-2434.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2N9EMX8_FAGSY1.050e-2334.34Integrase catalytic domain-containing protein n=1 ... [more]
A0A2P4YHT5_9STRA6.050e-2331.34RxLR effector candidate protein n=1 Tax=Phytophtho... [more]
A0A1Y1IVX6_KLENI3.020e-2229.54Integrase catalytic domain-containing protein (Fra... [more]
A0A1Y1IQX0_KLENI3.120e-2229.96Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A2N9G942_FAGSY1.230e-2036.26Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A1Y1IC23_KLENI1.530e-2029.66Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9EWE6_FAGSY1.710e-2033.66Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9FAH4_FAGSY2.740e-1932.20Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..77
e-value: 3.6E-10
score: 39.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig972contigF-serratus_M_contig972:213727..214464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig972.21055.1mRNA_F-serratus_M_contig972.21055.1Fucus serratus malemRNAF-serratus_M_contig972 213256..214683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig972.21055.1 ID=prot_F-serratus_M_contig972.21055.1|Name=mRNA_F-serratus_M_contig972.21055.1|organism=Fucus serratus male|type=polypeptide|length=210bp
MVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRN
RKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEK
EEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCMEVYTDLDFRACL
DMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFL
RQVQEFMEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2