mRNA_F-serratus_M_contig969.20999.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE) HSP 1 Score: 288 bits (738), Expect = 3.090e-89 Identity = 140/240 (58.33%), Postives = 174/240 (72.50%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 PK++ R+ RP QLV D MG P AK G + + K TDDY++MKE++LL+ K++ E++H NM VAA G RIE +RCDKGGE TG FR C + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L ATPYS++H+ PDL+GLR IG RAFVH + Y KKL++RAFEGKLC + +S+ YR+ P+ G VVESRN TF+E+ Sbjct: 91 PKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE) HSP 1 Score: 281 bits (720), Expect = 9.010e-89 Identity = 138/240 (57.50%), Postives = 172/240 (71.67%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 PK++ R+ RP QLV D MG P AK G + + K TDDY++MKE++LL+ K++ E++H NM VAA G RIE +RCDKGGE TG FR C + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L ATPYS++H+ PDL+GLR IG RAFVH + KKL++RAFEGKLC + +S+ YR+ P+ G VESRN TF+E+ Sbjct: 91 PKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDNCKNSAIKLEYAATNTPQQLGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERCRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAGVESRNVTFIES 330
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE) HSP 1 Score: 286 bits (731), Expect = 1.040e-87 Identity = 139/240 (57.92%), Postives = 173/240 (72.08%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 PK++ R+ RP QLV D MG P AK G + + K TDDY++MKE++LL+ K++ E++H NM VAA G RIE +RCDKGGE TG FR C + I +EY ATNTPQQ G SERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L ATPYS++H+ PDL+GLR IG RAFVH + Y KKL++RAFEGKLC + +S+ YR+ P+ G VVESRN TF+E+ Sbjct: 91 PKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGGSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE) HSP 1 Score: 288 bits (738), Expect = 3.070e-87 Identity = 140/240 (58.33%), Postives = 174/240 (72.50%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 PK++ R+ RP QLV D MG P AK G + + K TDDY++MKE++LL+ K++ E++H NM VAA G RIE +RCDKGGE TG FR C + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L ATPYS++H+ PDL+GLR IG RAFVH + Y KKL++RAFEGKLC + +S+ YR+ P+ G VVESRN TF+E+ Sbjct: 91 PKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE) HSP 1 Score: 288 bits (738), Expect = 6.330e-87 Identity = 140/240 (58.33%), Postives = 174/240 (72.50%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 PK++ R+ RP QLV D MG P AK G + + K TDDY++MKE++LL+ K++ E++H NM VAA G RIE +RCDKGGE TG FR C + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L ATPYS++H+ PDL+GLR IG RAFVH + Y KKL++RAFEGKLC + +S+ YR+ P+ G VVESRN TF+E+ Sbjct: 91 PKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KF63_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF63_9PHAE) HSP 1 Score: 269 bits (687), Expect = 3.910e-86 Identity = 130/227 (57.27%), Postives = 163/227 (71.81%), Query Frame = 1 Query: 40 LVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 LV D MG AK G + + K TDDY++MKE++L + K++ E++H NM VAA G +IE +RCDKGGE TG FR C + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGE+M TA YL NRSPHS L ATPYS++H+ PDL+GLR IG RAFVH + Y KKL++RAFEGKLC + +S+ YR+ P+ G VVESRN TF+E+ Sbjct: 58 LVVIDNMGSVNLPAKYKGGSFPYACKITDDYTKMKEVYLPRKKSDTTEAVHTYNMCVAAAGGYQIETIRCDKGGENTGSDFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGEIMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLDPSNGAVVESRNVTFIES 284
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE) HSP 1 Score: 283 bits (725), Expect = 4.730e-86 Identity = 139/240 (57.92%), Postives = 172/240 (71.67%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 PK++ R+ R QLV D MG P AK G + + K TDDY++MKE++LL+ K++ E++H NM VAA G RIE +RCDKGGE TG FR C + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L ATPYS++H+ PDL GLR IG RAFVH + Y KKL++RAFEGKLC + +S+ YR+ P+ G VVESRN TF+E+ Sbjct: 287 PKQSTRELSRSGQLVVIDNMGPANPPAKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIEAIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLLGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 526
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE) HSP 1 Score: 280 bits (717), Expect = 2.240e-84 Identity = 136/240 (56.67%), Postives = 173/240 (72.08%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 PK++ R+ RP QLV D +G P AK G + + K TDDY+++KE++LL+ K+ E++H N+ VAA G RIE +RCDKGGE TG FR C + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L ATPYS++H+ PDL+ LR IG RAFVH++ Y KKL++RAFEGKLC + +S+ YR+ P+ G VVESRN TF+E+ Sbjct: 91 PKQSTRELSRPGQLVVIDNVGPVNPPAKYNGGSFPYACKITDDYTKVKEVYLLRKKSNTTEAVHTYNICVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSRLRVIGARAFVHQERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KHY1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHY1_9PHAE) HSP 1 Score: 260 bits (665), Expect = 3.700e-84 Identity = 127/229 (55.46%), Postives = 159/229 (69.43%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTV 678 PK++ R+ RP QLV D MG P AK G + + K TDDY++MKE++LL+ K++ E++H NM VAA G IE +RCDKGGE TG FR C + I +EY ATNTPQQ+ V ERDG +LA +TRCL+K G FPP MWGELM TA YL NRSPHS L ATPYS++H PDL+GLR IG R FVH D Y KKL++RAFEGKLC + +S+ YR+ P+ G + Sbjct: 39 PKQSTRELSRPGQLVVIDNMGPVNPPAKNKGGFFPYECKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYLIETIRCDKGGEKTGSEFRDYCKNSAIKLEYAATNTPQQSAVLERDGQSLAGVTRCLLKDGVFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHKKSPDLSGLRVIGARTFVHHDRYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAI 267
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE) HSP 1 Score: 277 bits (709), Expect = 4.100e-83 Identity = 136/239 (56.90%), Postives = 169/239 (70.71%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLE 708 PK++ R+ RP QLV D MG P AK G + + K TDDY++MKE++LL+ K++ E++H NM VAA G RIE +RCDKGGE G FR C + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRS HS L ATPYS++H+ PDL+GLR IG RAFVH + Y KKL++RAFEGKLC + +S+ Y + P+ VVESRN TF+E Sbjct: 432 PKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENAGSEFRNYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSSHSALGGATPYSKLHNQSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYWVLNPSNRAVVESRNVTFIE 670 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig969.20999.1 >prot_F-serratus_M_contig969.20999.1 ID=prot_F-serratus_M_contig969.20999.1|Name=mRNA_F-serratus_M_contig969.20999.1|organism=Fucus serratus male|type=polypeptide|length=173bp MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGback to top mRNA from alignment at F-serratus_M_contig969:279436..280146- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig969.20999.1 ID=mRNA_F-serratus_M_contig969.20999.1|Name=mRNA_F-serratus_M_contig969.20999.1|organism=Fucus serratus male|type=mRNA|length=711bp|location=Sequence derived from alignment at F-serratus_M_contig969:279436..280146- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig969:279436..280146- >mRNA_F-serratus_M_contig969.20999.1 ID=mRNA_F-serratus_M_contig969.20999.1|Name=mRNA_F-serratus_M_contig969.20999.1|organism=Fucus serratus male|type=CDS|length=1038bp|location=Sequence derived from alignment at F-serratus_M_contig969:279436..280146- (Fucus serratus male)back to top |