prot_F-serratus_M_contig969.20999.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig969.20999.1
Unique Name	prot_F-serratus_M_contig969.20999.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	173

Homology

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BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KF63_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF63_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 4.200e-72
Identity = 109/173 (63.01%), Postives = 131/173 (75.72%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            M VAA  G +IE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGE+M TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:  112 MCVAAAGGYQIETIRCDKGGENTGSDFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGEIMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLDPSNGAVVESRNVTFIES 284

[Close]

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KQ40_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ40_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 7.550e-72
Identity = 108/173 (62.43%), Postives = 129/173 (74.57%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            M VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ G SERDG TLA +TRCL+K G+FPP MW +LM TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:    1 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGESERDGQTLAGVTRCLLKDGDFPPSMWWQLMLTAAYLFNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNLTFIES 173

[Close]

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 5.360e-69
Identity = 111/173 (64.16%), Postives = 131/173 (75.72%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            M VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:  158 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330

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BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KLG0_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG0_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 3.730e-68
Identity = 109/173 (63.01%), Postives = 129/173 (74.57%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            M VAA  G RIE +RCDKGGE TG  FR  C  +   +EY ATNT QQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:   49 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSATKLEYAATNTTQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 221

[Close]

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 4.360e-68
Identity = 109/173 (63.01%), Postives = 129/173 (74.57%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            M VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH +   KKL++RAFEGKLC +  +S+ YR+  P+ G  VESRN TF+E+
Sbjct:  158 MCVAAAGGYRIETIRCDKGGENTGSEFRDNCKNSAIKLEYAATNTPQQLGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERCRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAGVESRNVTFIES 330

[Close]

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 8.590e-68
Identity = 111/173 (64.16%), Postives = 131/173 (75.72%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            M VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:  158 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330

[Close]

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 1.140e-67
Identity = 111/173 (64.16%), Postives = 131/173 (75.72%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            M VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:  158 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330

[Close]

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 1.210e-67
Identity = 110/173 (63.58%), Postives = 130/173 (75.14%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            M VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ G SERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:  158 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGGSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330

[Close]

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.400e-67
Identity = 111/173 (64.16%), Postives = 130/173 (75.14%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            M VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:  354 MCVAAAGGYRIEAIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLLGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 526

[Close]

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 2.510e-66
Identity = 109/171 (63.74%), Postives = 130/171 (76.02%), Query Frame = 0

Query:    3 VAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+ LR IG RAFVH++ Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:  160 VAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSRLRVIGARAFVHQERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KF63_9PHAE	4.200e-72	63.01	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KQ40_9PHAE	7.550e-72	62.43	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5K500_9PHAE	5.360e-69	64.16	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KLG0_9PHAE	3.730e-68	63.01	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KCM0_9PHAE	4.360e-68	63.01	Integrase catalytic domain-containing protein n=5 ...	[more]
A0A6H5JJR8_9PHAE	8.590e-68	64.16	Integrase catalytic domain-containing protein n=11...	[more]
A0A6H5KCT3_9PHAE	1.140e-67	64.16	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K1R7_9PHAE	1.210e-67	63.58	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5JSL6_9PHAE	1.400e-67	64.16	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JRJ1_9PHAE	2.510e-66	63.74	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 7..139 e-value: 2.3E-15 score: 58.3
None	No IPR available	PANTHER	PTHR11439:SF250		coord: 11..172
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 11..172
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..109 score: 11.57
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 6..114

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig969	contig	F-serratus_M_contig969:279436..279954 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig969.20999.1	mRNA_F-serratus_M_contig969.20999.1	Fucus serratus male	mRNA	F-serratus_M_contig969 279436..280146 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig969.20999.1 ID=prot_F-serratus_M_contig969.20999.1|Name=mRNA_F-serratus_M_contig969.20999.1|organism=Fucus serratus male|type=polypeptide|length=173bp
MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNG
VSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEAT
PYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSK
AYRIHIPAKGTVVESRNATFLET

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR039537	Retrotran_Ty1/copia-like
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf