mRNA_F-serratus_M_contig962.20953.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig962.20953.1 vs. uniprot
Match: A0A6H5L5H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H4_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 2.400e-20 Identity = 57/114 (50.00%), Postives = 67/114 (58.77%), Query Frame = 1 Query: 61 TTRPSSRIALSELQVDPDLPLPLPKFPGYGKLFG-----EGRQSEQQTPPRLADCTGGMMRRGSSGGGLDR--------RGYLVVPGAVTPRQRQSHSLPQELRAIPTVPRPER 363 T RPS R AL E+QVDPD PLPLP FPG+GKL G + +QQ P + G + GS GG + GY V PG V PRQRQSH LP+ELRAI T+P PE+ Sbjct: 91 TRRPSDRRALVEMQVDPDRPLPLPTFPGHGKLLGGEAKHHSNKHQQQQAPSGNNLPGDLKHPGSGGGXXEADQPGGGHYHGYFV-PGVVAPRQRQSHGLPRELRAISTIPTPEK 203
BLAST of mRNA_F-serratus_M_contig962.20953.1 vs. uniprot
Match: D8LDL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL5_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 3.450e-20 Identity = 86/224 (38.39%), Postives = 103/224 (45.98%), Query Frame = 1 Query: 61 TTRPSSRIALSELQVDPDLPLPLPKFPGYGKLFG-EGRQSEQQTPPRLA----DCTGGMMRRGSSGGGLDR--------RGYLVVPGAVTPRQRQSHSLPQELRAIPTVPRPERFPGSTGRGRARPKAGTGIDRGSRTTSSRPAIR------------------------------ASSLPAPGSAAXXXXXXXXXRQTRLAVEELRKEMRQREQRLELELERL 603 T RPS R AL E+QVDPD PLPLP FPG+GKL G E + A G + GS GGG + GY V PG V P+QRQSH LP+ELRAI T+P PE+ P S R A + P+ R ++S P PGS+A R TR AV+ LRKEM +RE RLE L+RL Sbjct: 305 TRRPSDRRALVEMQVDPDRPLPLPTFPGHGKLLGGEAKHXXXXXXXXQAPSGNSLPGDLKHPGSGGGGGEADQPGEGHYHGYFV-PGVVAPKQRQSHGLPRELRAISTIPTPEKRPAS--RATASXXXXXXXXXXXXXLAQPPSARRAAAVPVAPPLPRQPAEXXXXXXXXXXXXXSASRPDPGSSAALASARDQRRSTRRAVDALRKEMLEREARLEXXLDRL 525 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig962.20953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig962.20953.1 >prot_F-serratus_M_contig962.20953.1 ID=prot_F-serratus_M_contig962.20953.1|Name=mRNA_F-serratus_M_contig962.20953.1|organism=Fucus serratus male|type=polypeptide|length=234bp SRRPRRITGKIDGAATAAVRTTRPSSRIALSELQVDPDLPLPLPKFPGYGback to top mRNA from alignment at F-serratus_M_contig962:59124..59827+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig962.20953.1 ID=mRNA_F-serratus_M_contig962.20953.1|Name=mRNA_F-serratus_M_contig962.20953.1|organism=Fucus serratus male|type=mRNA|length=704bp|location=Sequence derived from alignment at F-serratus_M_contig962:59124..59827+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig962:59124..59827+ >mRNA_F-serratus_M_contig962.20953.1 ID=mRNA_F-serratus_M_contig962.20953.1|Name=mRNA_F-serratus_M_contig962.20953.1|organism=Fucus serratus male|type=CDS|length=1404bp|location=Sequence derived from alignment at F-serratus_M_contig962:59124..59827+ (Fucus serratus male)back to top |