prot_F-serratus_M_contig962.20953.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig962.20953.1
Unique Nameprot_F-serratus_M_contig962.20953.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length234
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig962.20953.1 vs. uniprot
Match: A0A6H5L5H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H4_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 2.400e-20
Identity = 57/114 (50.00%), Postives = 67/114 (58.77%), Query Frame = 0 
Query:   21 TTRPSSRIALSELQVDPDLPLPLPKFPGYGKLFG-----EGRQSEQQTPPRLADCTGGMMRRGSSGGGLDR--------RGYLVVPGAVTPRQRQSHSLPQELRAIPTVPRPER 121
            T RPS R AL E+QVDPD PLPLP FPG+GKL G        + +QQ  P   +  G +   GS GG  +          GY V PG V PRQRQSH LP+ELRAI T+P PE+
Sbjct:   91 TRRPSDRRALVEMQVDPDRPLPLPTFPGHGKLLGGEAKHHSNKHQQQQAPSGNNLPGDLKHPGSGGGXXEADQPGGGHYHGYFV-PGVVAPRQRQSHGLPRELRAISTIPTPEK 203
[Close]
BLAST of mRNA_F-serratus_M_contig962.20953.1 vs. uniprot
Match: D8LDL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL5_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 3.450e-20
Identity = 86/224 (38.39%), Postives = 103/224 (45.98%), Query Frame = 0 
Query:   21 TTRPSSRIALSELQVDPDLPLPLPKFPGYGKLFG-EGRQSEQQTPPRLA----DCTGGMMRRGSSGGGLDR--------RGYLVVPGAVTPRQRQSHSLPQELRAIPTVPRPERFPGSTGRGRARPKAGTGIDRGSRTTSSRPAIR------------------------------ASSLPAPGSAAXXXXXXXXXRQTRLAVEELRKEMRQREQRLELELERL 201
            T RPS R AL E+QVDPD PLPLP FPG+GKL G E +          A       G +   GS GGG +          GY V PG V P+QRQSH LP+ELRAI T+P PE+ P S  R  A               +  P+ R                              ++S P PGS+A         R TR AV+ LRKEM +RE RLE  L+RL
Sbjct:  305 TRRPSDRRALVEMQVDPDRPLPLPTFPGHGKLLGGEAKHXXXXXXXXQAPSGNSLPGDLKHPGSGGGGGEADQPGEGHYHGYFV-PGVVAPKQRQSHGLPRELRAISTIPTPEKRPAS--RATASXXXXXXXXXXXXXLAQPPSARRAAAVPVAPPLPRQPAEXXXXXXXXXXXXXSASRPDPGSSAALASARDQRRSTRRAVDALRKEMLEREARLEXXLDRL 525
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig962.20953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5H4_9PHAE2.400e-2050.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDL5_ECTSI3.450e-2038.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 166..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig962contigF-serratus_M_contig962:59124..59825 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig962.20953.1mRNA_F-serratus_M_contig962.20953.1Fucus serratus malemRNAF-serratus_M_contig962 59124..59827 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig962.20953.1 ID=prot_F-serratus_M_contig962.20953.1|Name=mRNA_F-serratus_M_contig962.20953.1|organism=Fucus serratus male|type=polypeptide|length=234bp
SRRPRRITGKIDGAATAAVRTTRPSSRIALSELQVDPDLPLPLPKFPGYG
KLFGEGRQSEQQTPPRLADCTGGMMRRGSSGGGLDRRGYLVVPGAVTPRQ
RQSHSLPQELRAIPTVPRPERFPGSTGRGRARPKAGTGIDRGSRTTSSRP
AIRASSLPAPGSAAAAAAAREQRRQTRLAVEELRKEMRQREQRLELELER
LKRARLRRAANSGDRGGGNRFESCAPSERAAAFP
back to top