mRNA_F-serratus_M_contig1010.207.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1010.207.1
Unique NamemRNA_F-serratus_M_contig1010.207.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1010.207.1 vs. uniprot
Match: D7FU23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU23_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 1.720e-66
Identity = 114/200 (57.00%), Postives = 150/200 (75.00%), Query Frame = 1 
Query:  475 FALRQMDWYPGGSPSNSTTCIAEGDNWESHSESVFVFLRDGDSGDLSVGIQMAYNCVNNASNSHVFNFVGIGLTKVDKISGEQSATYSALATSSALYKDKRDDKIKNIVNPYAYLTMEIAQQTDSLVTITEINPFAIAEIFGQVGGFWDLLMIFWPLFFVSSYSTEPHLKIRNFKKTLQEGANRAMSFGRHTKPSGDDMP 1074
            + L  M WYPGG+ + STTCI+E   WESHSESVF+FLRD D+G LS GIQ+AY+C+ + S+SHVF ++GIGLTK DK+  + +A+Y AL TSSA+YKDKR D I  I +PYA+L+MEIAQ TDSL  ITEINP  IAE+FG VGGFWDLL++ WP+FF+S+   +PHLK+RNFKK++  G+   +   R    +  ++P
Sbjct:  138 YILLNMYWYPGGTANASTTCISEEGEWESHSESVFMFLRDSDTGILSAGIQVAYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALETSSAIYKDKRTDNITGIASPYAWLSMEIAQTTDSLEEITEINPLEIAELFGNVGGFWDLLLMLWPIFFISASRQDPHLKVRNFKKSVTRGSEVVVDLSRRVNSASIEIP 337
[Close]
BLAST of mRNA_F-serratus_M_contig1010.207.1 vs. uniprot
Match: A0A6H5L5Q2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Q2_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 4.450e-55
Identity = 121/235 (51.49%), Postives = 131/235 (55.74%), Query Frame = 1 
Query: 1867 NLDVFVDSDYAGKATYRGSGSGSVVMCAGACVSFFSRTRKSVALSSTEAE*VAMADGLKGAIFFRYLWSSIFPDRDVGCTVVKEDNVGALYRTNNPATVPNSKHIDVRHYFRVFVR*PPPMPATVSKPIPCLLSLIFLFFYWSGPSM*IFS*KQVYPAFCFSIWLPVAVNLLYFLVHAIDGVGGAIVETLFIPRRAARKEFKVVYVPSELQHEDFLTKPLQKEAFCVHRNFVVNL 2571
            +L+V+VDSDYA KAT R S SG VVMCAG+CVSFFSRT+KSV LSSTEAE  AMADG+K AIF RYLWS IFPD DVGCTV+KEDNVGAL+  NNPAT PNSKHIDVRH+F                                                                                I  R  R EFKVVYVPS LQH DFLTKPL KEAF VHRNFV+NL
Sbjct:  191 SLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFIFPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHF--------------------------------------------------------------------------------IRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 345
[Close]
BLAST of mRNA_F-serratus_M_contig1010.207.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 2.610e-49
Identity = 120/235 (51.06%), Postives = 130/235 (55.32%), Query Frame = 1 
Query: 1867 NLDVFVDSDYAGKATYRGSGSGSVVMCAGACVSFFSRTRKSVALSSTEAE*VAMADGLKGAIFFRYLWSSIFPDRDVGCTVVKEDNVGALYRTNNPATVPNSKHIDVRHYFRVFVR*PPPMPATVSKPIPCLLSLIFLFFYWSGPSM*IFS*KQVYPAFCFSIWLPVAVNLLYFLVHAIDGVGGAIVETLFIPRRAARKEFKVVYVPSELQHEDFLTKPLQKEAFCVHRNFVVNL 2571
            +L+V+VDSDYA KAT R S SG VVMCAG+CVSFFSRT+KSV LSSTEAE  AMADG+K AIF RYLWS I PD DVGCTV+KEDNVGAL+  NNPAT PNSKHIDVRH+F                                                                                I  R  R EFKVVYVPS LQH DFLTKPL KEAF VHRNFV+NL
Sbjct:  959 SLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFISPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHF--------------------------------------------------------------------------------IRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 1113
[Close]
BLAST of mRNA_F-serratus_M_contig1010.207.1 vs. uniprot
Match: A0A6H5KZC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZC8_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 7.980e-47
Identity = 104/235 (44.26%), Postives = 125/235 (53.19%), Query Frame = 1 
Query: 1867 NLDVFVDSDYAGKATYRGSGSGSVVMCAGACVSFFSRTRKSVALSSTEAE*VAMADGLKGAIFFRYLWSSIFPDRDVGCTVVKEDNVGALYRTNNPATVPNSKHIDVRHYFRVFVR*PPPMPATVSKPIPCLLSLIFLFFYWSGPSM*IFS*KQVYPAFCFSIWLPVAVNLLYFLVHAIDGVGGAIVETLFIPRRAARKEFKVVYVPSELQHEDFLTKPLQKEAFCVHRNFVVNL 2571
            ++++FVDSD+A KAT R S SG++VM AGACV +  RT+KSV LSSTEAE VAM+DG+K AIF RYLW  IFP RDVGCT V EDNVGA++  +NPAT PNSKHID+RH+F                                                                                I  R AR EFKVV+V S+LQ  DFLTKPL KE FC HR+FV+N+
Sbjct:   22 HMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHF--------------------------------------------------------------------------------IRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 176
[Close]
BLAST of mRNA_F-serratus_M_contig1010.207.1 vs. uniprot
Match: D8LMD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD1_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.530e-46
Identity = 95/226 (42.04%), Postives = 140/226 (61.95%), Query Frame = 1 
Query:  436 YFTKDASTSTIVIFALRQMDWYPGGSPSNSTTCIAEGDNWESHSESVFVFLRDGDSGDLSVGIQMAYNCVNNASNSHVFNFVGIGLTKVDKISGEQSATYSALATSSALYKDKRDDKIKNIVNPYAYLTMEIAQQTDSLVTITEINPFAIAEIFGQVGGFWDLLMIFWPLFFVSSYSTEPHLKIRNFKKTLQEGANRAMSFGRHTKPSG-DDMPRRTADEERPVWD 1110
            +  ++      + + L  M WYPGG  ++S TC+ EG  W++H++ ++VFL D +S  +S GIQ+ Y+C+ N S+SH F +VGIG+T  DK+  E      AL+ S+A  KD+ +  I   V PYA L+++  Q+ +SL  ITE++P  +AE+FG VGGFWDLLMI WP+FFV++   +PHLK RNF K++ +G    +  G    P G DD       EERP W+
Sbjct:  203 FLDRERDAKYYLDYLLLDMYWYPGGLEADSNTCVVEG--WKTHNQWMYVFLNDPESERVSTGIQVPYSCITNVSSSHSFTYVGIGVTIEDKLGQEPIVNNKALSVSTATVKDEVNPAI---VKPYAQLSLQFQQEPNSLEIITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQDPHLKPRNFTKSVTKGLG-GLRIGDSKHPGGRDDFNSSPQVEERPYWE 422
[Close]
BLAST of mRNA_F-serratus_M_contig1010.207.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 2.470e-46
Identity = 95/213 (44.60%), Postives = 136/213 (63.85%), Query Frame = 1 
Query:  475 FALRQMDWYPGGSPSNSTTCIAEGDNWESHSESVFVFLRDGDSGDLSVGIQMAYNCVNNASNSHVFNFVGIGLTKVDKISGEQSATYSALATSSALYKDKRDDKIKNIVNPYAYLTMEIAQQTDSLVTITEINPFAIAEIFGQVGGFWDLLMIFWPLFFVSSYSTEPHLKIRNFKKTLQEGANRAMSFGRHT-KPSGDDMPRRTADEERPVWD 1110
            + L  M WYPGG   +STTC+ EG  W++H + ++VFL D   G +S GIQ+ Y+C+ N S+SH   +VGIG+T  DK+  E      AL+ S+A  KD+ +  I   V PYA L++++ Q+ +SL  ITE++P  +AE+FG VGGFWDLLMI WP+FFV++   +PHLK RNFKK++ +G    +  G  T + + DD       EERP W+
Sbjct:  184 YLLLDMYWYPGGLEVDSTTCVVEG--WKTHKQWMYVFLNDPVLGQVSTGIQVPYSCITNVSSSHSHTYVGIGVTTEDKLGQEPIVNNKALSVSTATVKDEVNPAI---VKPYAQLSLQVQQEPNSLEVITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQDPHLKPRNFKKSVNKGLG-GLRVGDSTHRGARDDFNGSPPVEERPYWE 390
[Close]
BLAST of mRNA_F-serratus_M_contig1010.207.1 vs. uniprot
Match: D8LMD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD2_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 4.480e-46
Identity = 98/232 (42.24%), Postives = 147/232 (63.36%), Query Frame = 1 
Query:  436 YFTKDASTSTIVIFALRQMDWYPGGSPSNSTTCIAEGDNWESHSESVFVFLRDG---DSGDLSVGIQMAYNCVNNASNSHVFNFVGIGLTKVDKISGEQSATYSALATSSALYKDKRDDKIKNIVNPYAYLTMEIAQQTDSLVTITEINPFAIAEIFGQVGGFWDLLMIFWPLFFVSSYSTEPHLKIRNFKKTLQEGANRAMSFGR----HTKPSGDDMPRRTADEERPVWD 1110
            +  ++ + S  + + L  M WYPGG+ S+S TC+ EG  WE HSE ++V L+D    +SG +S GIQ+ Y+C+ N S+SH F +VG+G+T  +++  E  AT  AL+ S+A +KDK +  I     PYA L+++  Q+ +SL  ITE +PF +AE+FG VGGFWDLLM+ WP+FFV++   +PHLK RNFKK++ +G    +  G      T+  G   P    +EE+P W+
Sbjct:  129 FLGQERNASYYLDYLLLDMYWYPGGTESDSNTCVVEG--WEPHSEWMYVKLKDSGYPESGLVSTGIQVPYSCITNVSSSHSFTYVGMGVTIEERLGEEPVATNKALSVSTATHKDKVNAAIDK---PYAQLSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQDPHLKPRNFKKSVAKGLE-GLRIGELVTAGTRKDGSSNPED--EEEKPHWE 352
[Close]
BLAST of mRNA_F-serratus_M_contig1010.207.1 vs. uniprot
Match: A0A6H5L518_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L518_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 6.710e-45
Identity = 94/244 (38.52%), Postives = 139/244 (56.97%), Query Frame = 1 
Query:  415 RVPCGESYFTKDASTSTIVIFALRQMDWYPGGSPSNSTTCIAEGDNWESHSESVFVFLRDGDSGD-LSVGIQMAYNCVNNASNSHVFNFVGIGLTKVDKISGEQSATYSALATSSALYKDKRDDKIKNIVNPYAYLTMEIAQQTDSLVTITEINPFAIAEIFGQVGGFWDLLMIFWPLFFVSSYSTEPHLKIRNFKKTLQEGANRAMSFGRH-----------TKPSGDDMPRRTADEERPVWD 1110
            R     ++  ++      + + L  M W PGG+   STTC+ +G  W  H E V+ FL D D    +S G+ ++Y+C+ N SN+H FN +GIGLT+  K   +  ++Y AL T+  ++K+  +    NI  PYA+L++E+ QQ DS   ITE NP+  AE+FG +GGFWDLL+I WPL FV++   +PHLK R+FKK++  GA RA S  +            TK +   +     +EE P WD
Sbjct:  177 RTSAATAFVGQERDPHEFLDYILLDMYWNPGGTSGKSTTCVPDGVEWTDHREWVYGFLSDPDDPSAISTGVHLSYSCITNTSNTHTFNTMGIGLTQQKKFMDDDKSSYKALFTNFGVHKNVVNP---NITTPYAHLSLEMKQQFDSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVAAAQQDPHLKPRSFKKSVVRGAERAASVSKAIARAAPINPSITKSAASAVDGFEDEEEAPAWD 417
[Close]
BLAST of mRNA_F-serratus_M_contig1010.207.1 vs. uniprot
Match: D8LNQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ3_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 6.800e-45
Identity = 88/181 (48.62%), Postives = 121/181 (66.85%), Query Frame = 1 
Query:  490 MDWYPGGSPSNSTTCIAEGDNWESHSESVFVFLRDG-DSGDLSVGIQMAYNCVNNASNSHVFNFVGIGLTKVDKISGEQSATYSALATSSALYKDKRDDKIKNIVNPYAYLTMEIAQQTDSLVTITEINPFAIAEIFGQVGGFWDLLMIFWPLFFVSSYSTEPHLKIRNFKKTLQEGANRA 1029
            M WYPGG   NSTTC+AEG  W  H E V+ FL D  DS  +S G  ++Y+C+ N SN+H+FN +GIGLT  +K   +  ++Y AL T+  ++K+  +    N+  PYA+L++E+ QQ DS   ITE NP+  AE+FG +GGFWDLL+I WPL FV++   +PHLK R FKK++  GA RA
Sbjct:  179 MYWYPGGKFGNSTTCVAEGVEWADHREWVYGFLSDPEDSTAISTGFPLSYSCITNTSNTHIFNTLGIGLTNQNKFMEDDISSYKALFTNFGVHKNTVNP---NVTMPYAHLSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVTATQQDPHLKPRTFKKSVIRGAERA 356
[Close]
BLAST of mRNA_F-serratus_M_contig1010.207.1 vs. uniprot
Match: A0A6H5K6D1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6D1_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 1.070e-44
Identity = 89/182 (48.90%), Postives = 127/182 (69.78%), Query Frame = 1 
Query:  481 LRQMDWYPGGSPSNSTTCIAEGDNWESHSESVFVFLRDG---DSGDLSVGIQMAYNCVNNASNSHVFNFVGIGLTKVDKISGEQSATYSALATSSALYKDKRDDKIKNIVNPYAYLTMEIAQQTDSLVTITEINPFAIAEIFGQVGGFWDLLMIFWPLFFVSSYSTEPHLKIRNFKKTLQEG 1017
            L  M WYPGG+ S+S TC+ EG  WE HSE ++V L+D    +SG +S GIQ+ Y+C+ N S+SH F +VGIG+T  +++  E  AT  AL+ S+A ++DK +  I     PYA L+++  Q+ +SL  ITE +PF +AE+FG VGGFWDLLM+ WP+FFV++   +PHLK RNFKK++ +G
Sbjct:  101 LGDMYWYPGGTESDSNTCVVEG--WEPHSEWMYVKLKDPGYPESGLVSTGIQVPYSCITNVSSSHSFTYVGIGVTIEERLGEEPVATNKALSVSTATHRDKVNAAIDK---PYAQLSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQDPHLKPRNFKKSVAKG 277
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1010.207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU23_ECTSI1.720e-6657.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L5Q2_9PHAE4.450e-5551.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCD8_9PHAE2.610e-4951.06Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KZC8_9PHAE7.980e-4744.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMD1_ECTSI1.530e-4642.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K474_9PHAE2.470e-4644.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMD2_ECTSI4.480e-4642.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L518_9PHAE6.710e-4538.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ3_ECTSI6.800e-4548.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6D1_9PHAE1.070e-4448.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1010contigF-serratus_M_contig1010:128768..136789 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size3395
Cds size1023
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1010.207.1prot_F-serratus_M_contig1010.207.1Fucus serratus malepolypeptideF-serratus_M_contig1010 129257..134505 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928808.7539132-UTR-F-serratus_M_contig1010:128767..1288551622928808.7539132-UTR-F-serratus_M_contig1010:128767..128855Fucus serratus maleUTRF-serratus_M_contig1010 128768..128855 +
1690962581.8405836-UTR-F-serratus_M_contig1010:128767..1288551690962581.8405836-UTR-F-serratus_M_contig1010:128767..128855Fucus serratus maleUTRF-serratus_M_contig1010 128768..128855 +
1622928808.870471-UTR-F-serratus_M_contig1010:134505..1367891622928808.870471-UTR-F-serratus_M_contig1010:134505..136789Fucus serratus maleUTRF-serratus_M_contig1010 134506..136789 +
1690962581.9113035-UTR-F-serratus_M_contig1010:134505..1367891690962581.9113035-UTR-F-serratus_M_contig1010:134505..136789Fucus serratus maleUTRF-serratus_M_contig1010 134506..136789 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928808.7706363-CDS-F-serratus_M_contig1010:129256..1293331622928808.7706363-CDS-F-serratus_M_contig1010:129256..129333Fucus serratus maleCDSF-serratus_M_contig1010 129257..129333 +
1690962581.8497844-CDS-F-serratus_M_contig1010:129256..1293331690962581.8497844-CDS-F-serratus_M_contig1010:129256..129333Fucus serratus maleCDSF-serratus_M_contig1010 129257..129333 +
1622928808.783537-CDS-F-serratus_M_contig1010:129851..1299661622928808.783537-CDS-F-serratus_M_contig1010:129851..129966Fucus serratus maleCDSF-serratus_M_contig1010 129852..129966 +
1690962581.85884-CDS-F-serratus_M_contig1010:129851..1299661690962581.85884-CDS-F-serratus_M_contig1010:129851..129966Fucus serratus maleCDSF-serratus_M_contig1010 129852..129966 +
1622928808.7965443-CDS-F-serratus_M_contig1010:130209..1303021622928808.7965443-CDS-F-serratus_M_contig1010:130209..130302Fucus serratus maleCDSF-serratus_M_contig1010 130210..130302 +
1690962581.8705332-CDS-F-serratus_M_contig1010:130209..1303021690962581.8705332-CDS-F-serratus_M_contig1010:130209..130302Fucus serratus maleCDSF-serratus_M_contig1010 130210..130302 +
1622928808.8120067-CDS-F-serratus_M_contig1010:130666..1308111622928808.8120067-CDS-F-serratus_M_contig1010:130666..130811Fucus serratus maleCDSF-serratus_M_contig1010 130667..130811 +
1690962581.8807425-CDS-F-serratus_M_contig1010:130666..1308111690962581.8807425-CDS-F-serratus_M_contig1010:130666..130811Fucus serratus maleCDSF-serratus_M_contig1010 130667..130811 +
1622928808.837018-CDS-F-serratus_M_contig1010:133488..1337661622928808.837018-CDS-F-serratus_M_contig1010:133488..133766Fucus serratus maleCDSF-serratus_M_contig1010 133489..133766 +
1690962581.8904693-CDS-F-serratus_M_contig1010:133488..1337661690962581.8904693-CDS-F-serratus_M_contig1010:133488..133766Fucus serratus maleCDSF-serratus_M_contig1010 133489..133766 +
1622928808.8559933-CDS-F-serratus_M_contig1010:134190..1345051622928808.8559933-CDS-F-serratus_M_contig1010:134190..134505Fucus serratus maleCDSF-serratus_M_contig1010 134191..134505 +
1690962581.9012132-CDS-F-serratus_M_contig1010:134190..1345051690962581.9012132-CDS-F-serratus_M_contig1010:134190..134505Fucus serratus maleCDSF-serratus_M_contig1010 134191..134505 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1010.207.1

>prot_F-serratus_M_contig1010.207.1 ID=prot_F-serratus_M_contig1010.207.1|Name=mRNA_F-serratus_M_contig1010.207.1|organism=Fucus serratus male|type=polypeptide|length=341bp
MDWYPGGSPSNSTTCIAEGDNWESHSESVFVFLRDGDSGDLSVGIQMAYN
CVNNASNSHVFNFVGIGLTKVDKISGEQSATYSALATSSALYKDKRDDKI
KNIVNPYAYLTMEIAQQTDSLVTITEINPFAIAEIFGQVGGFWDLLMIFW
PLFFVSSYSTEPHLKIRNFKKTLQEGANRAMSFGRHTKPSGDDMPRRTAD
EERPVWDFTSAGLPDFGDLEETKHRRGEKKEQCVSQAATVAPSIKGISNV
LPQVSPAAFSAGPNFQHPRLSVSPEAHFSREVYPPRRPRDPASFQGSQGA
SSTIITQSVTAPVAEPRSVSSHGGQKMINPLSPASSPVPE*
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mRNA from alignment at F-serratus_M_contig1010:128768..136789+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1010.207.1 ID=mRNA_F-serratus_M_contig1010.207.1|Name=mRNA_F-serratus_M_contig1010.207.1|organism=Fucus serratus male|type=mRNA|length=8022bp|location=Sequence derived from alignment at F-serratus_M_contig1010:128768..136789+ (Fucus serratus male)
ACAGAAAGGGTGGTGCGTGGAGTTTTTATCATCAGACATCGACATTCCCT
CTGGCGAGCGAGATCCGGAAGACTATATCCTCTTGGATGTGAGTCGCAGC
ACCGACCACTTTGCATAGAAAACATTATATATAGCAAGAGTTTTCACAGA
GTACTCTTCCCCTTCGCTCACGCTAGAGGTGACCAAGCGCGGCGTGAGTT
TGAGAGCGAAGTTTTGACTGATGAGTCTCACCTATTGCCTGTCATAATTT
GCCTTGCTTAACGTGATCGTCTCCTCATTTCTCAGTGGTGCTGTATGCAA
TAAGGGGTACGTTGTGCGGTTGGCATTTGGAGGCTGGGTGTTGCCGTTCT
TCCTATCGAGCGTGTAGCTAGGCTTTGTAGCAAGACCAAGATAACACCCC
CTCAGTACGATGCGCGTGTTCCCTGTGGTGAGTCGTACTTTACGAAAGAT
GCATCGACCTCTACAATCGTAATCTTCGCGCTGCGACAGATGGACTGGTA
CCCAGGTGGTAGCCCTAGTAACTCCACCACCTGCATTGCCGAAGGGGACA
ACTGGGAATCTCACAGGTATGCAGTATCAGGCCTTTTCGAATACCTCCGC
ATAGAATAAGGCCTCTTCGAATGAGTCACGAAATTCCGAAAAAGTCTTGT
CCACTTAGTTTGGCTGGGTATTTTGGACTCTCAGTTGTCTGGGACGAGAG
AGCGAGGAGACATGAGCTCTGAGGCTCACATTAATCGTCGACAAGGTCTT
CTCCAGATGGCCGTGTCACCATGTTCTTGCCTCCGATTGAAGAAGGGCGC
CGGGAAGTTTTGCTGAAAATAATATGTTGACAAAGTGTGTTGGGTGCGAT
ACCCTAGGGTTTTTGTGATCAAACCTTAGTTGTTTGCTTTTTCGGTCGAT
ATATCATTATTACCGCAAGATTATCAACAGCTCAATTCCTGCGTCACGCT
CTCTTCCACTTATTGTTTAGCGACGTGTTTAAGCTTTGTGCGGTTGCTCC
CAATCGTTTTACGCGCTTGACCTTGCTCAGACGCCCAGCACATCCTCGTC
TCGGCCCACCCCATCTCTCCCCCCCCCCCTCCAGCGAGAGCGTTTTCGTC
TTCTTGCGAGATGGAGACTCTGGTGACCTGTCTGTTGGAATTCAAATGGC
GTACAACTGCGTGAATAATGCCTCCAACAGCCACGTGTTCAATTTCGTGG
TAAGCAATCATGCGCCATCTACTAATGAATTTATACAGCATGAGGCGTGA
AATGCACCGTTCCCTCCGCAGAACTGCTACAAAGCCGCTCCAGACACCCT
GGCTTTAAGTGTCTGCTCAGACATTAAACACACTGACGCTGGTGTGCACG
AACGGCACGTTTCACGAACTGGACACCCACGCGTAGCCGTAACGCCTCAC
ATTTCACCTGCGCACGGCGACGCATTTCCTCGCGCTCTCTAGGGTATCGG
ACTCACCAAGGTGGACAAGATTTCTGGTGAACAATCTGCTACTTATTCCG
CGCTGGCAACGTCCAGCGCTCTCTACAAAGATAAGGTAGGAATTGAACAG
GAACGGGGCGCGATGATCCAGGGATTCAAGTGACGACATTATTGGATGAT
GGTTTCACGGGCTACTTAGTGGCGAGCCAAGACAACTTGATATTCTTCGT
GTATGTATGATATCGTATATGTAATGCGGACGGGCGTTTATCACGGCGTA
CATATTGTTAAGTACTCCAAAAAAGCAATGACGCATCGAACAACCATATA
ATATCCTGCTGGGTATGAAAAATGGTTAGCAACGTGCTCCCAAATCTGGC
TGGGATCCAACTCCGTACGTGCAACGCTGTAAATCCGCCCCGGCCGTGAC
CTCGATGTTTGCCTCTTTTGTTTTTGCTCGGTTTACATTCGCCATATAGA
GGGACGATAAAATCAAGAACATCGTCAATCCGTACGCGTACCTGACGATG
GAAATCGCTCAGCAAACGGACTCTCTGGTGACCATCACGGAAATAAATCC
ATTCGCGATCGCAGAAATCTTCGGGCAAGTCGGAGGCTTTTGGGGTGAGC
AATCAAGAACGCAAAAAAAAAAAAATGCTTGCTTACCTTTGGTCATTAAT
GTGTAGTCACCCTTCCAACGGGAGGAAGTGGGAGCCCCCAACTATCGACA
GACTTTCAGCCTTCTTTACTACATCATACCCTCTGACTCCCCCGAAAGCA
AAGGCAGGGAGAGCGGGACTAGCAGCAGCAGCAATAGTCCTGCTCAATAG
CCAATAGTTGTTCGACCCACTGTTCTTCCAACTAGTCCTCTGCGTGATAC
GCTAGCCTGGGCTCATCTAAAACACCAACGCAGACTGACTGGGGTAACTT
TAACTTCAGGAATCATCCGTAGTATTCTCCAGACATTCTGCGAACGTTCT
CCAACCGATTCTTTGAACATTCGACTGACCGATACTCTCGCTCTTATAAA
TTCCAGATTCCGATTCTGGATCCTCCCCTTTGAATATCTCCCTCAAACTC
GCGATATCATCACAGCAGGAAGTCGGGAGCCACCAACTTGCGACAAACAG
CCAGCCTCCATACAGGAAGTCGTCTTTCGTTGCGCATGTCTGATCCAAAT
GTTCCGCTCCAACCCGCCTTCTTGTCACCAATCAGTTGATTCAACTAGTC
AACGCATCCATGAATCACCAAATCAATTAATCAGCCAATCAATCAACTAA
ACAGTGAATTGACCAAACCAACCAATCTGCCAATCAGTGACGTTTGCGTC
TCAAATATATCAACCATTGATATCCCACACTATCCTTTGGCCCGGCTGCA
AGTCCGGCTGCACGTCTGCGTCAGCTAACAGATCCGACACTGCCTTAGCA
TCCACCGCGGGGGACCTTACGTAACCCTTATGTCCGTCCGACTTCCATCT
CCCTTCTTTCTATACTACATTGGCCGACGCCTCCCCTGCCGACAAGAAGG
TGGTGCACCCAATACTCAGGGAGTGTTTTGCGTACTCGGCCGCTGGTAAT
CCCGCCAACGCCCTCACTCCGCGAAGGGCAGCAGCCGCCCACGCTTGCAT
CCAGATGACCAGTTACTACGGGCGGTATCAAACGCCACCAGCCGCGCGTG
GGAGGGAAAATACATACACGATGACAGCAATTCGATCATCAACTAGACTG
CCCCGCCCACATCCTGTTACGAGAGAGGTGGACCCGCGCGAGTATGCGTC
ATCACCGTTCCGTTCCGCAACTGATCCTCTATTGAGCTCCAAAATCGAAC
CTCGACGTTCTCAGCCTGACCCGAAAGAAAACCACACCCTCACTGCGCAA
AATGTATCCATCGTTCCAACGTTCTTCCTTGCTCGCAAATATTTCGCCCG
CCCGTGCTAAAAAGAAAAACGAAGCCCCAGGTATCAGCCACAGCACACGC
CCCCAGGGTCCCCGCTGATGGCACAACGATCCGCAAGGGGCACGCTCCAT
GCTAGAGGCCTACGTGTACGTGACTTGGTCCCGGCCTCTGCGTGAGAGCG
AGTGCCCCCTTTTAATGCGTCTACTATCCACGGTGGCGGGGAAACAATTC
AAACGCTTTTAGCGGTGAAATAAATCACCATTGCAAAGTGACGCACAGTT
CCTGTCCCCTACGGGACGCTCACCGCGCACCACAACCAACATATATGCGG
ACATCACCATGCCGAGCAGCTTAAGGGCATTGATATAAATGCTATCCTTC
GACTGAAGATGCTTGCTGCTTCCACGAAAATGAGCTATAAGAGCTCTTCT
TAAGATGAATCGTACAGCCGACATTAGCTTGTTTCTAAACAGGCACTCCC
CGCAGCGTGCTTGGACGCGTCCGAAATTAAAGTGCGGCATGGCGGGGATG
CTACCAGGAGATATGTGGGCGCGGACGTCCCCCCCCTTGCTTACGTTCAT
GTGTACCTCAACGATACACCTGGGCATGAATGCACCGCCAAACCTCGAGG
TCACCGTGGACATCAGGATCAAGAGAGACTAACCACCAGGAATGCTCGCC
CGATGACAAAAAATCGGCGGCCAAAGACAGGGGCATGTTAGCTTACGCCA
ATGGTCTCTACACAAAAAACTTCCCCAGGCTTGCTGCCACCGACACGTGC
AATAACAAACCCGTCAGATCCGCTATCTGCTTACATGTGGCAGAGTGCCG
AGATTGGGATCGGCTCGCAAAAACCCTGTCGAGGCTTAGAGCGCTTGCGG
GGCGGCAACAAAATATTGAGTTTGTAGGTGTCAAGAACCTAGCCTAGTAC
CTCAAAACGTGTACTCCACCCCAAGACCTTATGCGCTTCCAACATGGGGG
GGGGAGGGGCGCGGGGGCCGACCAATCTAAAGTGGTCCGACGCGAGGGAC
TCTTCGACACGTCTCAACTTTCGCCCGTCTTGAAAAAAACGGACCCCGGT
CAAAATACCATCGTCGCTAGCCTGGGCTCTACTGCGATACCAACGCAGAC
TGATTTCCGTAGCATTCTCGGAACATTCAACTGACCGGCACTCTCGCTCT
TACAAATTCCAGATTCCTATTCCGGAATCTTCCCCGGATAGTTTTTCGAT
ACAACACTACCACTTCTAACTCCGTTTGAAAACTGAGGTCGTCCTTGCAA
AACAGCGTCGTAGATATGTCGGCTACTGCCCTCATACACACTCCGAAGTT
ATATATTTCATCTCTGATAGTTCGATCCCGTGCTCCCAATGCCCTTTGAC
TGTTCTCGTGCTGCGCCGCAGATTTGTTGATGATTTTTTGGCCTCTCTTT
TTCGTGTCCTCTTATTCCACGGAGCCTCATCTCAAGATCCGTAACTTCAA
GAAGACCTTACAGGAAGGAGCGAACCGTGCGATGAGCTTCGGGCGCCATA
CAAAGCCGTCTGGGGACGACATGCCACGCAGGACGGCGGACGAGGAGCGT
CCAGTGTGGGATTTCACCTCTGCAGGGCTGCCAGACTTTGGGGATTTGGA
AGAAACCAAGCACCGGCGGGGAGAGAAGAAAGAGCAGTGCGTTTCCCAGG
TGCGCTTTGTTCTTGCTAGTCGTCCAGATAAATGACACTGTTGGATTGTT
TTACTCTGTCCAACATATTTGGTTTGAAGAGCGTTTTGATGATGCGTTTG
TCACATCTTATGGTAGACGAAGCAAGCGCAGCTGTCAGGGAGAGAGGTAA
GTCTTGGTGCTTTCTTGGTTCGTTATCAATGCCGTCTTGTGGCGTCTTCG
CGAGATGGTGTCGAGCCCGCCCACGATTCTTCGTCCGATTTGGAGTATTG
CACACGACCCCCATCCATCTATCGCAACCAAGCAATTTCTATTATCGCCG
TTCTTCTCATTCCGCAGACTGCGCTGCGACAGCGGAATATTTTGTTGACA
TCAAATTTTGTGCCCTTCAACCTTTGCCCGCCAATGCTTCCGAACCTGAA
ACACTACGCTATGCGAACGGTAGGCAGCAACAGTCGCGCCGTCCATCAAA
GGGATCTCCAACGTATTACCGCAGGTGTCACCGGCTGCTTTCTCAGCAGG
CCCGAATTTCCAACACCCTCGACTATCGGTGAGCCCAGAGGCTCATTTCT
CCAGAGAAGTCTACCCGCCGCGCAGACCTCGAGATCCGGCTAGCTTTCAA
GGATCACAAGGCGCATCGTCAACTATCATAACTCAGAGCGTGACGGCTCC
CGTCGCTGAACCCCGAAGCGTTAGCTCTCACGGTGGCCAGAAAATGATAA
ATCCCCTGAGCCCGGCGTCTTCACCAGTGCCAGAATGATACTTCTCACTA
GCACCTCACGCCAGTCGAGAGTTCTTTTCTTCTTCGGGGTCGATTTCGCT
TTCGAACGACGCCACTAATACAAGCAGTAGAAGCCTAAGCAGATCTACAC
AAAAATAACGTTCCTGTGGCGCTGCCTATATCGAGAGCGTCACGATCGGC
AGCTTCATAGGAACACATGGCTTGCGAATCAGATTCACCCGAATATCTCA
ATGCGGTGCGGGCCGTTGCAGGGTATTCTCACGGACCAAAGTTTGTGCAC
TAGAAGGCTGCGTTGCATGTTTTGATGTACGTTAGGTTCACGAATAGTTA
CGGTAAGTATTACATTTCAAAGGGGTACGGAAGGTGGTGTTCAACTTGGA
CGTGTTTGTGGATTCGGACTACGCCGGCAAGGCGACATATAGGGGGTCTG
GTTCGGGGAGTGTTGTGATGTGTGCTGGTGCTTGTGTGTCGTTTTTCTCG
AGGACTCGAAAGAGCGTCGCACTGTCCTCTACGGAAGCTGAGTAAGTTGC
GATGGCTGATGGGTTAAAGGGAGCGATTTTCTTTCGGTATCTCTGGAGTT
CTATCTTTCCGGATAGAGATGTAGGGTGCACTGTTGTTAAGGAGGACAAC
GTTGGAGCGCTCTATCGGACCAACAACCCAGCCACCGTTCCTAACTCTAA
GCACATCGATGTTCGTCATTACTTCAGAGTGTTTGTACGATAGCCCCCCC
CCATGCCAGCGACGGTTTCAAAACCGATTCCGTGCCTTCTCTCCCTCATT
TTCTTATTTTTTTACTGGTCCGGCCCGTCCATGTGAATATTTTCGTAAAA
GCAAGTCTATCCCGCATTTTGTTTTTCAATTTGGCTTCCTGTAGCGGTGA
ATTTACTTTATTTTCTGGTTCATGCAATCGACGGTGTGGGGGGGGCTATC
GTAGAAACACTCTTCATCCCGAGGCGTGCTGCAAGGAAGGAATTTAAGGT
AGTTTACGTGCCGTCGGAATTGCAGCACGAAGATTTCCTCACTAAACCGC
TGCAAAAGGAGGCGTTTTGTGTACACCGCAACTTTGTTGTGAATCTTTGA
AGATCCTTCGATGGCCCCATTTTCTAGTTGCCACGCAACTATTGTTGTAC
TTTTTGCGACTTGATTTTCTAGGGCAGAGGGGGCGCTATGTTATGTGGTG
TTTTTTATGCTTTCCTGTGTCGATGGCTTAAGTTGCTAGTTGCCACGCAA
CGGAGGTCTTGAGTGTGTGATAGCCATGCAACCATGTTTCGTCTGGATCT
TTGTCTAGTTTTCTGGCAGCCAACACCTTCTTTTTTTTGTTATTGCTTTC
ATTTTTTTTGGGGTGTGGATTCAATATGCTTGTTTGAGTCGGCTCGATTC
GAGGATTAATGCCGGATAGCATGAGTGATACTGTGTTGAATCTCTGCACG
TACTGCTGTCGAAAACCATGGGGGGGGATTGTGGTGCAATGATCCTCTCC
GCAGTACTAGCAACGCTTTGGTCATTTCGTTTTGTTTTGTTTTCTTGATG
TTTATTTGTGTTAACGCGTTCTACCTGCGGAAACCGGGGGGGAAATTTCC
TGTGTCCTGGTTTTAACCTTCGCGTGCCCCCGAGGGTAGTTACTAACAGG
CATGTTTGTATAACTGCGTTTTACCTGCGGTGTTGATATTTAACATGTCT
GAAACGTTTGATTTGATACGTTTGATTTTGAAAATGATGAAAAAGAAGAT
CGGCATTCTTTTTTGTGGAGTTGTAGCAGTTGCAACGGCATGGCTGATAA
CGCACCACCGTTGGCTGAGATTCGAGGGTTAACTTCTTGAGATGTTTGGG
ACGATGTTCCAGCAGGGGGGTTTTTAATAGGTTGATATTGATTTCGATAT
CGGAGCAACAGTATTTCTGGTGAAGGTTTTCACTCCGCTTGTTTACCGTT
TGGTTTTTTCCGACTCTGGTTAAGTTGATGGATTACGGAGGAATAGTAAT
CTGATATCTGAATACTTCGCGGTGGTGATGAAACCCTCTGCTGAAGCATG
GATCGCAATAAGAATGTATTGGACCATTAAAATCTGCGTACTTAAAACAG
CAGAAAAACATCAAGTCCAGCTTGATTTTACGCGTTCTGCAACGTACAAC
ATAGTTGCGTAGCTGGTCTGCCGTAGAATATATGCTTGAAGTCTCATCAT
GGTACGACAACCAAGAGTGGGGTAGGTACACAAACAGCAGAGGGTGCGTG
AACGCGCTGGAGCTTATTCTACAACAAACGCAGTCGTCGTAGAAGTTCAC
TTTTTGTCAACTTGGCCTTAGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1010:128768..136789+

>mRNA_F-serratus_M_contig1010.207.1 ID=mRNA_F-serratus_M_contig1010.207.1|Name=mRNA_F-serratus_M_contig1010.207.1|organism=Fucus serratus male|type=CDS|length=2046bp|location=Sequence derived from alignment at F-serratus_M_contig1010:128768..136789+ (Fucus serratus male)
ATGGACTGGTACCCAGGTGGTAGCCCTAGTAACTCCACCACCTGCATTGC
CGAAGGGGACAACTGGGAATCTCACAGATGGACTGGTACCCAGGTGGTAG
CCCTAGTAACTCCACCACCTGCATTGCCGAAGGGGACAACTGGGAATCTC
ACAGCGAGAGCGTTTTCGTCTTCTTGCGAGATGGAGACTCTGGTGACCTG
TCTGTTGGAATTCAAATGGCGTACAACTGCGTGAATAATGCCTCCAACAG
CCACGTGTTCAATTTCGTGCGAGAGCGTTTTCGTCTTCTTGCGAGATGGA
GACTCTGGTGACCTGTCTGTTGGAATTCAAATGGCGTACAACTGCGTGAA
TAATGCCTCCAACAGCCACGTGTTCAATTTCGTGGGTATCGGACTCACCA
AGGTGGACAAGATTTCTGGTGAACAATCTGCTACTTATTCCGCGCTGGCA
ACGTCCAGCGCTCTCTACAAAGATAAGGGTATCGGACTCACCAAGGTGGA
CAAGATTTCTGGTGAACAATCTGCTACTTATTCCGCGCTGGCAACGTCCA
GCGCTCTCTACAAAGATAAGAGGGACGATAAAATCAAGAACATCGTCAAT
CCGTACGCGTACCTGACGATGGAAATCGCTCAGCAAACGGACTCTCTGGT
GACCATCACGGAAATAAATCCATTCGCGATCGCAGAAATCTTCGGGCAAG
TCGGAGGCTTTTGGGAGGGACGATAAAATCAAGAACATCGTCAATCCGTA
CGCGTACCTGACGATGGAAATCGCTCAGCAAACGGACTCTCTGGTGACCA
TCACGGAAATAAATCCATTCGCGATCGCAGAAATCTTCGGGCAAGTCGGA
GGCTTTTGGGATTTGTTGATGATTTTTTGGCCTCTCTTTTTCGTGTCCTC
TTATTCCACGGAGCCTCATCTCAAGATCCGTAACTTCAAGAAGACCTTAC
AGGAAGGAGCGAACCGTGCGATGAGCTTCGGGCGCCATACAAAGCCGTCT
GGGGACGACATGCCACGCAGGACGGCGGACGAGGAGCGTCCAGTGTGGGA
TTTCACCTCTGCAGGGCTGCCAGACTTTGGGGATTTGGAAGAAACCAAGC
ACCGGCGGGGAGAGAAGAAAGAGCAGTGCGTTTCCCAGATTTGTTGATGA
TTTTTTGGCCTCTCTTTTTCGTGTCCTCTTATTCCACGGAGCCTCATCTC
AAGATCCGTAACTTCAAGAAGACCTTACAGGAAGGAGCGAACCGTGCGAT
GAGCTTCGGGCGCCATACAAAGCCGTCTGGGGACGACATGCCACGCAGGA
CGGCGGACGAGGAGCGTCCAGTGTGGGATTTCACCTCTGCAGGGCTGCCA
GACTTTGGGGATTTGGAAGAAACCAAGCACCGGCGGGGAGAGAAGAAAGA
GCAGTGCGTTTCCCAGGCAGCAACAGTCGCGCCGTCCATCAAAGGGATCT
CCAACGTATTACCGCAGGTGTCACCGGCTGCTTTCTCAGCAGGCCCGAAT
TTCCAACACCCTCGACTATCGGTGAGCCCAGAGGCTCATTTCTCCAGAGA
AGTCTACCCGCCGCGCAGACCTCGAGATCCGGCTAGCTTTCAAGGATCAC
AAGGCGCATCGTCAACTATCATAACTCAGAGCGTGACGGCTCCCGTCGCT
GAACCCCGAAGCGTTAGCTCTCACGGTGGCCAGAAAATGATAAATCCCCT
GAGCCCGGCGTCTTCACCAGTGCCAGAATGAGCAGCAACAGTCGCGCCGT
CCATCAAAGGGATCTCCAACGTATTACCGCAGGTGTCACCGGCTGCTTTC
TCAGCAGGCCCGAATTTCCAACACCCTCGACTATCGGTGAGCCCAGAGGC
TCATTTCTCCAGAGAAGTCTACCCGCCGCGCAGACCTCGAGATCCGGCTA
GCTTTCAAGGATCACAAGGCGCATCGTCAACTATCATAACTCAGAGCGTG
ACGGCTCCCGTCGCTGAACCCCGAAGCGTTAGCTCTCACGGTGGCCAGAA
AATGATAAATCCCCTGAGCCCGGCGTCTTCACCAGTGCCAGAATGA
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