mRNA_F-serratus_M_contig942.20789.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig942.20789.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 192 bits (487), Expect = 2.660e-54 Identity = 100/155 (64.52%), Postives = 115/155 (74.19%), Query Frame = -2 Query: 10 QLEMLQEVFKISKHAPQRWLSLVRVMERIIRLWHVLRRVYADAGDEFPLDKDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTTVLDPEKPLRVYDVPAAPNXXXXXXXXXXXXG--QRGKPPLPSSMVDPDSLRPAAVKCRQ 468 QL+M EV KI KHAPQRWLSLVRVMERIIRLWHVLR+VYA+ G EFPLDK +NKD+ILQLYSLL+PLAAITRDGQYGAVPM+AE+HMAFA LK LDP PL+V+D+P P+ GK PLP V+P +LRP A K R+ Sbjct: 399 QLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLKVFDIPPTPDSPAALQSDEELPVTVNTGKKPLPHKTVEPAALRPVATKTRE 553
BLAST of mRNA_F-serratus_M_contig942.20789.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE) HSP 1 Score: 160 bits (404), Expect = 4.780e-44 Identity = 76/93 (81.72%), Postives = 85/93 (91.40%), Query Frame = -2 Query: 187 LEMLQEVFKISKHAPQRWLSLVRVMERIIRLWHVLRRVYADAGDEFPLDKDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLK 465 LEML E+ KI+KHAPQRWLSLV VMERIIRLWHVLR+VYA+ G+EFPLDK NN+DDILQLYSLLQPL+AITRDGQYG PMTAE+H+AFA LK Sbjct: 381 LEMLDEILKITKHAPQRWLSLVLVMERIIRLWHVLRKVYANDGEEFPLDKGNNRDDILQLYSLLQPLSAITRDGQYGNAPMTAEMHLAFAQLK 473
BLAST of mRNA_F-serratus_M_contig942.20789.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 161 bits (407), Expect = 5.290e-43 Identity = 86/155 (55.48%), Postives = 104/155 (67.10%), Query Frame = -2 Query: 4 QLEMLQEVFKISKHAPQRWLSLVRVMERIIRLWHVLRRVYADAGDEFPLDKDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTTVLDPEKPLRVYDVPAAPNXXXXXXXXXXXXGQRGKPPLPSSMVDPDSLRPAAVKCRQEM 468 Q++ML E+FK+ KHAPQRWLSL R +ER IRLWHVLR++Y+D G FPL++ + KD ILQLYSLLQPL++ITRDGQYG PM A+I M F L T VLDP K L+V+ VP GQ+ KP LP MV P+ L A K R EM Sbjct: 416 QVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDLKVFQVPPI------GEDGLPDRGQQKKP-LPFKMVPPEQLHAAVEKTRVEM 563
BLAST of mRNA_F-serratus_M_contig942.20789.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE) HSP 1 Score: 157 bits (396), Expect = 8.080e-43 Identity = 80/162 (49.38%), Postives = 106/162 (65.43%), Query Frame = -2 Query: 4 QLEMLQEVFKISKHAPQRWLSLVRVMERIIRLWHVLRRVYADAGDEFPLDKDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTTVLDPEKPLRVYDVPAAPNXXXXXXXXXXXXGQRGKPP-------LPSSMVDPDSLRPAAVKCRQEM 468 Q+++L +V KI APQRWL+ VR +ER+IRLWHVLR++Y+DAG FPL++ +NK+ ILQL+SLLQ L+++TRDGQYG PM A++ M F LK VLDP KPL+V+D+P GQ G P LP MV+PD L P A K R ++ Sbjct: 132 QVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQYGNAPMQADVFMKFGELKMEVLDPSKPLKVFDIPPL--------------GQDGLPDREEQKKALPHKMVEPDDLHPVAKKARSKL 279
BLAST of mRNA_F-serratus_M_contig942.20789.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 153 bits (386), Expect = 3.590e-41 Identity = 81/160 (50.62%), Postives = 103/160 (64.38%), Query Frame = -2 Query: 4 EMLQEVFKISKHAPQRWLSLVRVMERIIRLWHVLRRVYADAGDEFPLDKDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTTVLDPEKPLRVYDVPAAPNXXXXXXXXXXXXGQRGKP-------PLPSSMVDPDSLRPAAVKCRQEM 462 E+L EV K+ KHAPQRWLS+VR MERIIRLWH LR++Y+D G FPL++ +NK+ +LQLYSLL+PL ITRDGQYG PM A+I+M LK +L+ EK L+VY+ P G+ G P PLP MV +L PAA K R+E+ Sbjct: 73 ELLGEVLKVVKHAPQRWLSMVRTMERIIRLWHALRKLYSDEGKVFPLEEGDNKNGVLQLYSLLEPLCMITRDGQYGGAPMMADIYMKMGILKMGMLNLEKELKVYETPRV--------------GENGLPDREEQNKPLPHKMVAHGNLHPAAKKAREEL 218
BLAST of mRNA_F-serratus_M_contig942.20789.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 150 bits (378), Expect = 2.810e-40 Identity = 77/155 (49.68%), Postives = 101/155 (65.16%), Query Frame = -2 Query: 4 QLEMLQEVFKISKHAPQRWLSLVRVMERIIRLWHVLRRVYADAGDEFPLDKDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTTVLDPEKPLRVYDVPAAPNXXXXXXXXXXXXGQRGKPPLPSSMVDPDSLRPAAVKCRQEM 468 Q+++L EV I APQRWL+LVR MER+IRLW V+R++Y+DAG FPL++ +NKD I QLYSLLQPL+++TRDGQYG +PM A+I+M F LK VL+ L+V+D+P + K PLP MV D L P A K R E+ Sbjct: 163 QVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDR-------EEQKKPLPHKMVAHDELHPVAQKARNEL 310
BLAST of mRNA_F-serratus_M_contig942.20789.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE) HSP 1 Score: 146 bits (368), Expect = 6.150e-40 Identity = 75/150 (50.00%), Postives = 99/150 (66.00%), Query Frame = -2 Query: 19 QLEMLQEVFKISKHAPQRWLSLVRVMERIIRLWHVLRRVYADAGDEFPLDKDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTTVLDPEKPLRVYDVPAAPNXXXXXXXXXXXXGQRGKPPLPSSMVDPDSLRPAAVK 468 Q+++L EV KI AP+RWL+LVR +ER+IRLWHVLR++Y+D G FPL++ +NKD ILQLYSLLQP +++TRDGQYG PM A+I+M LK VLDP + L+V+D+P + K LP +V D LRP A K Sbjct: 183 QVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLYSDTGKTFPLEEGDNKDCILQLYSLLQPPSSVTRDGQYGGAPMLADIYMKCGMLKMRVLDPSEELKVFDIPPLGEDSLPDR-------EEQKKALPHKVVAHDDLRPVAQK 325
BLAST of mRNA_F-serratus_M_contig942.20789.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 150 bits (379), Expect = 1.240e-39 Identity = 83/153 (54.25%), Postives = 99/153 (64.71%), Query Frame = -2 Query: 10 QLEMLQEVFKISKHAPQRWLSLVRVMERIIRLWHVLRRVYADAGDEFPLDKDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTTVLDPEKPLRVYDVPAAPNXXXXXXXXXXXXGQRGKPPLPSSMVDPDSLRPAAVKCRQ 468 Q+EML E KIS+HAPQRWLSLVRV+ERIIRLWHVLR+ L+SLLQPLA ITRDGQYGAVPMTAE+HMAFA LK +LDP++PL+V+D+PA P + K LP MV+P +LRP A K R+ Sbjct: 204 QMEMLGETLKISRHAPQRWLSLVRVIERIIRLWHVLRK----------------------LFSLLQPLAVITRDGQYGAVPMTAEMHMAFAELKKELLDPDEPLKVFDIPATPVSPEAEQADEEVP--KKKKSLPHKMVEPAALRPVATKTRE 332
BLAST of mRNA_F-serratus_M_contig942.20789.1 vs. uniprot
Match: A0A6H5JGB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGB7_9PHAE) HSP 1 Score: 146 bits (368), Expect = 1.840e-39 Identity = 75/155 (48.39%), Postives = 99/155 (63.87%), Query Frame = -2 Query: 4 QLEMLQEVFKISKHAPQRWLSLVRVMERIIRLWHVLRRVYADAGDEFPLDKDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTTVLDPEKPLRVYDVPAAPNXXXXXXXXXXXXGQRGKPPLPSSMVDPDSLRPAAVKCRQEM 468 Q+++L EV KI APQRWL+LVR +ER++RLW VLR++Y+D G FPL++ ++KD ILQLYSLLQP ++TRDGQYG PM A+I+M F LK VL P + L+V+DVP + K LP MV D L P A K R ++ Sbjct: 79 QVDVLGEVLKIPDQAPQRWLTLVRTLERVVRLWRVLRKLYSDTGKTFPLEEGDDKDCILQLYSLLQPFPSVTRDGQYGGAPMLADIYMKFGMLKMRVLHPSEELKVFDVPPLGEDGLP---------EEQKKALPQKMVAHDDLHPVAQKARNKL 224
BLAST of mRNA_F-serratus_M_contig942.20789.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 150 bits (378), Expect = 2.230e-39 Identity = 77/155 (49.68%), Postives = 101/155 (65.16%), Query Frame = -2 Query: 4 QLEMLQEVFKISKHAPQRWLSLVRVMERIIRLWHVLRRVYADAGDEFPLDKDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTTVLDPEKPLRVYDVPAAPNXXXXXXXXXXXXGQRGKPPLPSSMVDPDSLRPAAVKCRQEM 468 Q+++L EV I APQRWL+LVR MER+IRLW V+R++Y+DAG FPL++ +NKD I QLYSLLQPL+++TRDGQYG +PM A+I+M F LK VL+ L+V+D+P + K PLP MV D L P A K R E+ Sbjct: 292 QVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDR-------EEQKKPLPHKMVAHDELHPVAQKARNEL 439 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig942.20789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig942.20789.1 >prot_F-serratus_M_contig942.20789.1 ID=prot_F-serratus_M_contig942.20789.1|Name=mRNA_F-serratus_M_contig942.20789.1|organism=Fucus serratus male|type=polypeptide|length=145bp AHFLAALDGGGTQAIRVHHRGRQRWLAPLPLVRLRGLLRFRGIRRRGDVVback to top mRNA from alignment at F-serratus_M_contig942:281837..282305+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig942.20789.1 ID=mRNA_F-serratus_M_contig942.20789.1|Name=mRNA_F-serratus_M_contig942.20789.1|organism=Fucus serratus male|type=mRNA|length=469bp|location=Sequence derived from alignment at F-serratus_M_contig942:281837..282305+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig942:281837..282305+ >mRNA_F-serratus_M_contig942.20789.1 ID=mRNA_F-serratus_M_contig942.20789.1|Name=mRNA_F-serratus_M_contig942.20789.1|organism=Fucus serratus male|type=CDS|length=870bp|location=Sequence derived from alignment at F-serratus_M_contig942:281837..282305+ (Fucus serratus male)back to top |